| mature miRNA: TGACATGGTTGGCCCATGGAA species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|143798388|gb|CJ964311.1|CJ964311 CJ964311 Y. Ogihara unpublished cDNA library, whchul Triticum aestivum cDNA clone whchul35d0 TGACATGGTTGGCCCATGGAA EST sequence (targeted fragment marked with yellow): AAGGCAACTGCTGGTATTGAGCCTGAGGATGTGGCGAAGCGCTTGATGGACTACGGATTCCATGGGCCAACCATGTCATGGCCCGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAGGCTGAACTAGACAGGTTCTGTGATGCCCTTATCTCCATCAGAGAGGAAATTGCAGAGGTAGAAAATGGCAAAGCAGATGCACACAACAATGTCCTGAAGGGCGCTCCTCACCCACCCCAACTCCTGATGGGTGACGCATGGACTAAGCCATACTCTAGGGAGTATGCTGCGTTCCCCGCCGCGTGGCTTCGTGGTGCCAAGTTCTGGCCAACAACATGTCGTGTGGACAACGTGTACGGGGATCGCAACCTGATCTGCACTCTGCAGCAGGCATCCCAGGTGGCAGAGGAAGCTGCAGCTGCCACCGCGTAATCTTCTGATGATGACGATCCTGGTGTGTGAAACAGTGTGAAGTTATCATGCTTCCTGTAGGAGGGAAGCATGCTTGCTTCTAAATCCCTCATGTACTGTATATATTCTCCTCAAATGCCACCTTCTCCTGTATCCTCTGTACCCCCCACGGCCCCCACTGCCTCCCCATTCCCATTTGAAAGTGAAATTAGCTATATTGGCTAGCATTTCCACTCTTCTCTGAATACAGGACAAATAATGGAGATCTGTTTTGATGTCCTAGC | |||||||||
gi|239861078|gb|GR303371.1|GR303371 WRIS_1995 cDNA library of a compatible interaction between stripe rust (Puccinia striiformis TGACATGGTTGGCCCATGGAA EST sequence (targeted fragment marked with yellow): GTTGGTACCCGGGATTCGGCCATTACGGCCGGGGATTCCATGGACCAACCATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCCACTGAGAGTGAAAGCAAGGTTGAACTAGACAGGTTCTGTGATGCCCTTATCTCTATCAGGGAGGAAATTGCACAGGTAGAAAATGGCAAAGCAGATGCGCACAACAATGTCCTGAAGGGCGCTCCTCACCCACCCCAACTCCTGATGGGTGACGCATGGACTAAGCCATACTCTAGGGAGTATGCTGCGTTCCCGGCGGCGTGGCTTCGGGGTGCCAAGTTCTGGCCAACGACATGTCGTGTGGACAACGTGTACGGGGATCGCAACCTGATCTGCACTCTGCAGCAGGCATCCCAGGTGGCGGAGGAAGCTGCAGCTGCCACCGCGTAATCTTCTGATGATGACGATCCTGGTGTGTGAAACAGTGTCAAGAAGTTATCATGCTTCCTGTAGGAGGGAAGCATGCTTGCTTCTAAATCCCTCATGTACTGTATATATTCTCCTCAAATGCCACCTTCTCCTGTATCCTCTGTACCCGCACTGCCTCCCCATTCCCATTTGAAAGTGAAATTAGCTATATTGGCTAGCATTTCCACTCTTCTCTGAATACAGGACAAATAATGGAGGCCTTTTTTGATGTCCTAGCCATACACGGAAAGAAAATCTAGTTATTCTTAGATTGTGTACTCTTATA | |||||||||
gi|151371059|gb|EV253974.1|EV253974 LWSRC280 Incompatible SSH cDNA library from wheat leaves inoculated by stripe rust fungus Tr TGACATGGTTGGCCCATGGAA EST sequence (targeted fragment marked with yellow): ACACCTACATAGCCATGATGGGCTCTCAGGGACTGACTGAAGCTTCAAAGATTGCTATCCTGAACGCGAACTACATGGCAAAGCGTCTGGAGAAACACTACCCAGTTCTTTTCCGTGGAGTCAATGGAACTGTTGCCCATGAATTCATCATTGATTTAAGAGGGTTCAAGGCAACTGCTGGTATTGAGCCTGAGGATGTGGCGAAGCGCTTGATGGACTACGGATTCCATGGACCAACCATGTCATGGCCCGTTCCAGGCACACTTATGATTGAACCCACTGAAAGTGAAAGCAAGGCTGAACTAGACAGGTTCTGTGATGCCCTTATCTCCATCAGAGAGGAAATTGCAGAGGTAGAAAATGGCAAAGCAGATGCGCACAACAATGTCCTGAAGGGCGCTCCTCACCCACCCCAACTCCTGATGGGCGACGCATGGACTAAGCCATACTCTAGGGAGTATGCTGCGTTCCCCGCGGCGTGGCTTCGGGGTGCCAAGTTCTGGCCAACAACATGTCGTGTGGACAACGTGT | |||||||||