| mature miRNA: TGAGCCAAGAATGACTTGCTG species: Prunus persica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|89495257|gb|DY651051.1|DY651051 PU4_plate43_H22 PU4 Prunus persica cDNA similar to expressed mRNA inferred from Contig3888 Pr TGAGCCAAGAATGACTTGCTG EST sequence (targeted fragment marked with yellow): GCCTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAAACAGTTGTAAATGAAATTTTATAAAAAATCAAGGGCCGGAGGATTTTCCTTTGAAAGTATTGCGTCCAAATTAGTGGCAGCTCCATCCAAAATCATGAAAGAACAAGCAAGCTACCAAAAAAATAAGGATCACATTACTTATTTATATGCGTCTCAAGAAAAGCCAATCCAATATTCCAACAAACTGCTTATCAATAAATTGCGACCTGCTCCAAACTTTTCCTAAAATAATGCTTCTTCAGTTTTCGTCTCCTACAATTCATACCCCAGTACTGATTGTGTAAAAAAAATGCGTCAGTTGCAATTTTCTTCCCGTCATCCTTGCGGTTCCAGTGGTAAAATGCATGTGTCCTGTTTATAATCTCAAGCGTAAAATGTCCATAGGCGGCTTCTCGGAATGCAAAATAATCTGGTTGGGGATCTGTAAACCTTCCAGCAAGTCCTTCTTGGTTCCCTCCATC | |||||||||
gi|89493108|gb|DY648902.1|DY648902 PU4_plate2_D16 PU4 Prunus persica cDNA similar to weakly similar to calcineurin-like phosphoe TGAGCCAAGAATGACTTGCTG EST sequence (targeted fragment marked with yellow): TGTAAATGAAATTTTATAAAAAATCAATGGCCGTAGGATTTTCCTTTGAAAGTATTGCGTCCGAATTAGTGGCAGCTCCATCCAATATCATGAATGAACAAGCAAGCTACCAACAAAATAAGGATCACATTACTTATTTATATGCGTCTCAAGACAAGCCAATCCAATATTCCAACAAACTGCTTATCAATAAATTGCGACCTGCTCCAAACTTTTCCTAACATAATGCTTCTTCAGTTTTCGTCTCCTACGATTCATACCCCAGTACTGATTGTGTAAGACAAATGCGTCAGTTGCAATTTTCTTCCCGTCATCGTTGCGGTTCCAGTGGTAGAGTGCATGTGTCCTGTTTATAATCTCAAGCGTAGAATGTCCATAGGCGGCTTCTCGGAATGCAGAATAATCTGGTTGTGGATCTGTAAACCTTCCAGCAAGTCCTTCTTGGTTCCCTCCATCTCCAACAGTTATGTATACAGGAGCTGATTTGTCTGGTATGGGGTTCTGGTCACCACTTGTTATGTTGTAGTGTATATTTGAGATTCTATACGATCTCTCATACGCATGGACATGGCCAGCAAAGATTACATCAACTTTGTAATGAACGAACCCACTCTCAAACACTACTCGCATGCTTTCACCTTNNCATGTATGAGCATCATT | |||||||||
gi|84569397|gb|DW341016.1|DW341016 PP_LEc0002G21f Peach shoot Prunus persica cDNA clone PP_LEc0002G21f, mRNA sequence TGAGCCAAGAATGACTTGCTG EST sequence (targeted fragment marked with yellow): CTAGGAACTAAGTGGATCCCCTCGGGCTGCAGGGGAAAATTCCCACTTTCCAAGAGAATTAATGCAGTTATGAAAAGGGTCTTGCATGAAAGGGTAGAGAGTGGAGCTGAGCCAAGAATGACTTGCTGCAATTAATCGAAGGTGAAGTAACAATTTGTATATCGTTGGGCATACATACGCAGCAAGTTGTTCTTGGTTCTGTTTGGTTCTCTATGTTCTCATGTCAGACTCTTGGATGTGAGACTCTTGGATTGGATCCACTACTAGGCTTACTGTGAGCTCTCTCTCTCTCTCTCTCTCGTTCTTGATTCTGTTTGGTTCTCTATGTTCTCATGGTCAGACTCTTGGATGTGAGACTCTTGGATTGGATCCACTACTAGGCTTACTGTGAGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGCACATAGGACATGGTTGATGGTTGTACAACCGCTTACCATGTTTGAATTCAAGGACTACTGATAATTATGCACAGATCATGAATGATTTGATATCATGACACAGTATGATAATAGATCCGTGCTTAAGTTGCATTAAGCCACAACCTCCAATGGAATTACAGTTTTCAGCTTGTTTGGGTTGATATTGAGTTGATTTGTTAATATTTCATATTTATGGTTCTTCGTGATTATATTTACAGAATAACTTGAGTCTTTATCAATTTATCGAGTTGAAAAGGAATTGTCACTTCAAGGTTATAAAT | |||||||||
gi|22477853|gb|BU039261.1|BU039261 PP_LEa0001L22f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0001L22f, mRNA TGAGCCAAGAATGACTTGCTG EST sequence (targeted fragment marked with yellow): CTCCCTCTTGTCTTCTCCCCTCTCTTCAAAGTTGATCAGACAAGTGGGAAATCGCAATTGCAATTTTGGAAGGGAGGAATGGCTTCGTGGAATTCGATTCCGCTGGAAATCACATACGAAGTTCTGGGATGGGCGGCGTTCATAAGTTGGTCCATCAGCTTCTACCCACAAGTCATCTTGAATTTCCGGAGGAAAAGTGTTGTGGGGTTGAACTTCGATTTCGTGGTGCTGAATTTAACAAAGCACTCCTCCTATCTCATCTACAACGCCACTCTCTACTTCAGCTCCGCCGTTCAAAAGCAGTACTTTGAGAAGTACGGCTTAGGACAGATGATACCTGTTGCAGCAAACGATGTTGCTTTCTCTATTCATGCTGTTTTACTGACAGCAATTACCCTGTACCAAATTGCAATCTATGAACGTGGAAATCAGAAGGTCTCCAAGATTTCCATTGGAATTGTTGCTGCCGTGTGGTTAGGTGCTGCAGTTTGTGTTTTCTTAGCTNTGCCAAGTCATTCTTGGCTTTGGTTGATTTCTATTTTCAACTCGATTCAAGTTTTTATGACAGTCATCAAATATATTCCCCANGCGGTCA | |||||||||
gi|89494237|gb|DY650031.1|DY650031 PU4_plate37_O22 PU4 Prunus persica cDNA similar to similar to PQ-loop repeat_field family pro TGAGCCAAGAATGACTTGCTG EST sequence (targeted fragment marked with yellow): GCAATTTTGGAAGGGAGGAATGGCTTCGTGGAATTCGATTCCGCTGGAAATCACATACGAAGTTCTGGGATGGGCGGCGTTCATAAGTTGGTCCATCAGCTTCTACCCACAAGTCATCTTGAATTTCCGGAGGAAAAGTGTTGTGGGGTTGAACTTCGATTTCGTGGTGCTGAATTTAACAAAGCACTCCTCCTATCTCATCTACAACGCCACTCTCTACTTCAGCTCCGCCGTTCAAAAGCAGTACTTTGAGAAGTACGGCTTAGGACAGATGATACCTGTTGCAGCAAACGATGTTGCTTTCTCTATTCATGCTGTTTTACTGACAGCAATTACCCTGTACCAAATTGCAATCTATGAACGTGGAAATCAGAAGGTCTCCAAGATTTCCATTGGAATTGTTGCTGCCGTGTGGTTAGGTGCTGCAGTTTGTGTTTTCTTAGCTTTGCCAAGTCATTCTTGGCTTTGGTTGATTTCTATTTTCAACTCGATTCAAGTTTTTATGACAGTCATCAAATATATTCCCCAGGCGGTCATGAACTTCCTGCGAAAGAGCACAGATGGATTCAGTAT | |||||||||
gi|51918321|gb|AJ824799.1|AJ824799 AJ824799 S3 Prunus persica cDNA clone S38O9, mRNA sequence TGAGCCAAGAATGACTTGCTG EST sequence (targeted fragment marked with yellow): GATTCGCAATCCCTAACATCAAACAGCACTGGCCAAGAAAAGGGCACAGGCTCTGGTCCAGCCCACTCGTCACAATCTGGCAGTTCATCAGGTTCAGAACCCTTTCCCTCAGATTCTGCCGAAACATGGAATTCCTCCAATAGTCAGCAAGAAGGAAGAGGATCCCAAGTGCATGACGCGTACCCAGGTCACAATTATGCAAATGGCAGTGGCTGCTTCCAGACTCATGGTGGCTTGCAGGCTTCGATGTATCCTTCATACTCGGGCAAGAGAGGGGAAGAAGGAGATTGTACAGGCCAGCAACGGGGAAGTATTTCTTCGAATCAGGCCTCACAGAGGCGTCTTGCCATCCAGTGAACCTCTGGGAGGTGGATGCCAAGATGGAGGATTGGACCCTTATAACAGAAAAAGGGTCAGTCCCCTGGTTATATCTTTGGCAATGTGTTTGCCAGGCGGCAATTCATTCTTGGCTTTGTTCTTGTGCTTGTGGCATAGATGAATGGAAGGAGAGTGATATGAATGGGCCATTTGGATTCTGTGAAGTCCTTTGATGCTTCAGTTCATTACATCCTTCCTATTTTTGCCTGATGTACAGAGTAGTTTTCAGTAATTTGAAGTACATATGGAAAACTGAAATTTAAAAAAAAAAAAAAAAAAA | |||||||||
gi|84627854|gb|DW341464.1|DW341464 PP_LEc0004G21f Peach shoot Prunus persica cDNA clone PP_LEc0004G21f, mRNA sequence TGAGCCAAGAATGACTTGCTG EST sequence (targeted fragment marked with yellow): AAGGTTGGACAATTTGCCTTTTTCAACTCCGATAAATTAGATAAAGACTCAAGTTATTCTGTAAATATAATCACGAAGAACCATAAATATGAAATATTAACAAATCAACTCAATATCAACCCAAACAAGCTGAAAACTGTAATTCCATTGGAGGTTGTGGCTTAATGCAACTTAAGCACGGATCTATTATCATACTGTGTCATGATATCAAATCATTCATGATCTGTGCATAATTATCAGTAGTCCTTGAATTCAAACATGGTAAGCGGTTGTACAACCATCAACCATGTCCTATGTGCACAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGCTCACAGTAAGCCTAGTAGTGGATCCAATCCAAGAGTCTCACATCCAAGAGTCTGACCATGAGAACATAGAGAACCAAACAGAATCAAGAACGAGAGAGAGAGAGAGAGAGAGCTCACAGTAAGCCTAGTAGTGGATCCAATCCAAGAGTCTCACATCCAAGAGTCTGACATGAGAACATAGAGAACCAAACAGAACCAAGAACAACTTGCTGCGTATGTATGCCCAACGATATACAAATTGTTACTTCACCTTCGATTAATTGCAGCAAGTCATTCTTGGCTCAGCTCCACTCTCTACCCTTTCATGCAAGACCCTTTTCATAACTGCATTAATTCTCTTGGAAAGTGGGAATTTTCC | |||||||||