| mature miRNA: TGAGCCAAGGATGACTTGCCGGT species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|254319436|gb|GR830687.1|GR830687 CCCC4796.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC4796 TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CCTTCTCATATTGGAAGGAACATGCAGGGTATTCGCAGACATTGGTGGTGGTGGTGGTGGTGGAAATCAACACCGTCTATCAGTCCTTATGTGACAAACTTTTATGGCACACTAGCAAGTTATTCTTCAGCGCTCTGTTGGAGATCATAATTGCCTGTGTTCCCATAGGGAAGTCATCCTTGGCTCATTTACATTATTATGTTTTTACTAATATGTTTATGTTAGTTGTTTTGGAACAAAGATATAGACCTTTGCTAGATTTCAATTTTCTTATATTGATGACTGAAATATTTGGGCAAAGTAGCACATTTAACTGACTAGTCACAAGCAATATTTCTTTTATGTTGATGTTACATTGGAAAATGTCTTTTTGAGAACTAAGGTTTTGGTTGTGGTGTATGTTTTATCTTTGTACACTGATGCTTTATTAATTTTGAGAG | |||||||||
gi|209703651|gb|BW664642.1|BW664642 BW664642 GMFL01 Glycine max cDNA clone GMFL01-23-I01 3', mRNA sequence TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CGAGCAAAGCTTAAGGCTCAAAACAAACTCATCAAAAGTCGTAAGCCATATCTTCATGAGTCTCGGCACCGCCACGCATTGAAAGGGGTTAGGGGAACTGGGGGGCGCTTTCTTAGTGCCAAACAGCTTCAACAGTTTAATGCAGAACTTGTCACCGATGCCCATTCAGGCCCGGGCCCTGTCAATGTTTATCAAAAGAAAGATGCATCTGAGGCAGAAAGTCATCCCTCAAGAACTGGAAAAAATGCATCTATCACATTCACAGCAATCTCTGGCTTGACAAGTATGTCCGGTAACAGTGTCAGTTTCAGGCGGCCTGAGCACAACTTCTTGGGGAACTCTCCTAATATAGGTGGATCGTCGCAATGCAGTGGGGGACTCACCTTTGGTGGTGGAGCTCGGCAATGTACTTCAGTTGGCCGGTGAGAGGTGGAACCAATCAAAATCATGTTCACTGGTCTGGCAAATCATCCTTGGCTTAGTCACTTTACTTTCTGTGTTTCATGTGTTGTTACGGAAATGTTGTCTTTTGGAAGACTCTGCATTAGCACTCAGACTTTTGCTAGTGCTTTCCCATGTATTTTGAAAGTTGCTCTTGTTTCTGTTGTTGAACTGGACC | |||||||||
gi|254318488|gb|GR832656.1|GR832656 CCCC5937.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC5937 TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): AGTCTGAGGTTGGAATGTTAAATTCATCAAAGCAGACAAATCGAAGCAGTCCAAACATCTCTGGTTCAGAGGTGACTAGCATGTATTCAAGGGAAGGTTTTGATGGCTTTTCTGTCAATCCTCTTGGATCTTCCGTCCACTCTCTAGCAGACATGATAGGTAGTGAGCATGGTATCATTAGGCCCACTAAATGGGTTGCAGCAGTACCAGGTAACTGCTACAACCTTAAAATTTGATTTGTAAGGAGACTAGTGGGCTTGGTGCTGCGATGTTGCACCACCACCCTATCCTTGCAAGGGACCAGGTGAAGAAGTTCTTTTTCCGTTTCCTGTGTTCATTGTGACGAATTTTGTTTTGGAGGCGTGCCTCTACATCTGGTTTTAGGCAATCCATTCTTGGCTACTGCTTAGGCAACTCATCCTTGGCTCATTATATTAATAGTACTTTCCTTTTCTTTCTGCACAGGCTTGTCATAACATGGTTATACATGCTAATGGCTTCATATCCTGATGCAGTAGACTATGATGTGTCTGTTTGTGTTAAAATAACAAGAATTCTGGTTTCGTGTGTTTTTTAGTTATGTCTAGATGTGGTGTTTTGTTCTGGTTTTCTGACTTCGTGTTGAGCTATGTAACATAGAACTCTGGATTGTGATCTTAGAAAAATAAAACATTGATCTGACTTACCCTCC | |||||||||
gi|254341851|gb|GR852988.1|GR852988 CCCC19138.g1 CCCC Glycine max callus grown in dark condition Glycine max cDNA clone CCCC1913 TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CACTGAAGAGAGCTAGAGGTTCCGGTGGACGCTTTTTGAATGCCAAAAAGCTCCAGAGTTGAAACTCACTTCAGCAAACCGTGGCCTAGATGTTTCTGGCTGTACTCAATTGAATCTGAGTGGAAATATGTCAGAATCAAAGGTTCAAGCAGTAGAAAACTTGAACTACAGAAATGGTGCTTCTACAACCACGTGTTCTGATGTCATTAGTACATCTAATAGTGATGATGTCTTCCAGCAACATGAGTCAGACTTTAGGTTATGTGGTTACCCTTCTCATATTGGAAGGAACATGCAGGGTTATTCCGCAGACATTGGTGGTGGTGGTGGTGGTGGAAATCAACACCGTCTATCAGTCCTTATGTGACAAACTTTTATGGCACACTAGCAAGTTATTCTTCAGCGCTCTGTTGGAGATCATAATTGCCTGTGTTCCATAGGGAAGTCATCCTTGGCTCATTTACATTATTATGTTTTTACTAATATGTTTATGTTAGTTGTTTTGGAACAAAGATATAGACCTTTGCTAGATTTCAATTTTCTTATATTGATGACTGAAATATTTGGGCAAAGTAGCACATTTAACTGACTAGTCACAAGCAATATTTCTTTTATGTTGATGTTACATTGGAAAATGTCTTTTTGAGAACTAAGGTTTTGGTTGTGGTGTATGTTTTATCTTTGTACACTGATGCTTTATTAATTTTGAGAGAAGTGCCTTGGCTGC | |||||||||
gi|192317870|gb|FK010204.1|FK010204 GLQA823TF JCVI-SOY2 Glycine max cDNA 5', mRNA sequence TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): GGTGACGAATTTCGTTCTGGAGGTGTGATTCTTCATCTGGTTTTAGGCAAACCATTCTTGGCTACTGCTTAGGCAACTCATCCTTGGCTCATTATATTAGTAGTACTGTCTTTTTCTTTCTGCACAGGCTTGTCATGACATGGTCATACATGCTAATGGCTTCATATCCTGATGCAGCAGACTATGATGTGTCTGTGTTAAAATAACAAGAATTCTGGTTTCGTGTGTTTTTTAGTTATGTCTAGGTGTGGTATTTTGTTCTGGATTTCTGACTTTGTGTGGAGCTATGTAACATAGAACTCTGTATTGTGATCTTTGTTAGAAAAATAAAACATCGATCTGGACTTACCCTCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGAAAAAAAAAAAAAAAAAAA | |||||||||
gi|193449195|gb|FK411988.1|FK411988 454GmaGlobSeed146620 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CGCCGGGCAAGTTATCTTTGGCTTAATATTTTTGCTCTTAAAAGATCGACTTCACATTGAAATTATCCGAACTTGGGGCACCCGAGTGGTTGGCCTTACCCTGCTAGTAATTGGTGCTATGGGAATTAAGGAAGCTTCAGAAGTGCCTACCCCGTGTGTTGCCTTAGAAAATGGTGAATGTGATGTCAGTGTCTATGAATCACGCGATAGTAAACCTGTTGTAGGAAAGAAGAAG | |||||||||
gi|208149375|gb|GD944565.1|GD944565 454GmaGlobSeed687214 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CGGCCGGGCAAGTTATCTTTGGCTTAATATTTTTGCTCTTAAAAGATCGACTTCACATTGAAATTATCCGAACTTGAGGCACCCGAGTGGTTGGCCTTACCCTGCTAGTAATTGGTGCTATGGGAATTAAGGAAGCTTCAGAAGTGCCTACCCCGTGTGTTGCCTTAGAAAATGGTGAATGTGATGTCAGTGTCTATGAACCACGCGATGGTAATCCTGTTGTAGGAAAGAAGAAGATTGGTTTTGCTACTTTTGCCACTGGAATAGTTCACGG | |||||||||
gi|208276063|gb|GE080293.1|GE080293 454GmaGlobSeed822941 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CGCCGGGCAAGTTATCTTTGGCTTAATATTTTTGCTCTTAAAAGATCGACTTCACATTGAAATTATCCAAACTTGGGGCACCCGTGTGGTTGGCCTTACCCTGCTAGTAATTGGTGCTATGGGAATTAAGGAAGCTTCAGAAGTGCCTATCCTGTGTGTTGCCTTAGAAAATGGTGAATGTGATGTTAGCGTCTATGAATCACGCGATAGTAATCCTGTTGTAGGAAAGAAGAAGATTGGTTTTG | |||||||||
gi|193555102|gb|FK515099.1|FK515099 454GmaGlobSeed249731 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CAATGTACTTCAGTTGGCCGGTGAGAGGTGGAACCAATCAAAATCAAGTTCACTGGTCTGGCAAATCATCCTTGGCTTAGTCACTTTACTTTCTGTGTTTCATGTGTTGTTACGGAAATGTTGTCTTTTGGAAGACTCTGCATTAGCACTCAGACTTTTGCTAGTGCTTTCCCATGTATTTTGAAAGTTGCTCTTGTTTCTGTTGTTGAACTGGACCAGAAAGTTTGTGTTTAG | |||||||||
gi|208108868|gb|GD907580.1|GD907580 454GmaGlobSeed650229 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CGCCGGGCAAGTTATCTTTGGCTTAATATTTTTGCTCTTAAAAGATCGACTTCACATTGAAATTATCCGAACTTGGGGCACCCGAGTGGTTGGCCTTACCCTGCTAGTAATTGGTGCTATGGGAATTAA | |||||||||
gi|193659169|gb|FK606900.1|FK606900 454GmaGlobSeed341532 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CGCCGGGCAAGTTATCTTTGGCTTAATATTTTTGCTCTTAAAAGATCGACTTCACATTGAAATTATCCGAACTTGGGGCACCCGAGTGGTTGGCCTTACCCTGCTAGTAATTGGTGCTATGGGAATTAAGGAAGCTTCAGAAGTGCCTACCCCGTGTGTTGCCTTAGAAAATGGTGAATGTGATGTCAGTGTCTATGAATCACGCGATAGTAATCCTGTTGTAGGAAAGAAGAAG | |||||||||
gi|208335156|gb|GE135859.1|GE135859 454GmaGlobSeed878507 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): TCGAAACCGACTTCACCGGTCAGGCAAATCATCCTTGGCTTAGTCACTTTTGTCTGTGTCTTAATGTGTTCGTACTAAATGATCATTTTGAGAGACTCTTCAGTCTGCATTAGCACTAATAAGACCTTTCCAATTGCTTTGGCATGTATTTTAAAGTTGCTATTGTACTGGATTCTGAACTGGATTGGAATAGTTTGTGCATGGAACTAGTATGTTTGTGTTAGTTACTGTTGAATTTCCTTACTTTT | |||||||||
gi|207787152|gb|GD756283.1|GD756283 454GmaGlobSeed498932 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGAGCCAAGGATGACTTGCCGGT EST sequence (targeted fragment marked with yellow): CGGCCGGGCAAGTTATCTTTGGCTTAATATTTTTTGCTCTTAAAAGATCGACTTCACATTGAAATTATCCAAACTTGGGGCACCCGTGTGGTTGGCCTTACCCTGCTAGTAATTGGTGCTATGGGAATTAAGGAAGCTTCAGAAGTGCCCATCCTGTGTGTTGCCTTAGAAAATGGTGAATGTGATGTTAGCGTCTATGAATCACGCGATAGTAATCCTGTTGTAGGAAAGAAGAAGATTGGTTTTGCTACTTTTGCCACTGGAATAGTT | |||||||||