| mature miRNA: TGAGCCGTGCCAATATCA species: Prunus persica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|209172308|gb|FC865847.1|FC865847 PPN080E10-T7 PPN Prunus persica cDNA clone PPN080E10, mRNA sequence TGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): GGTGTGAGATGAGATGGGTTTGCGAATCAAGCAGAGAAGAGGAGAAGTGGGATAGTCAAACTCAAACAAACCTGGTTTGGGCAATTGCCATCTCAAAACCTCTGTGTGTCTCCCCTTCCCTCCGTCGCTTGGCAGTGGCACGGTTCATTGGCTCCAGTCCAATCCAACCAGCTGCTGCGCTGAACTCAGCCTTTACTTCTTTGCCACTGATTCTCGAGCCATGAATTGGGTTCAACGAAAGATTTATCTTTACAATGTCACTTTTGGGCTCTATATGTTGGATTGGTGGGAGCGTTATCTCTTCAATACTTTGGTCGTTGTATTGATGTGGTTCATTTTTTACAATGGCTCACGATATGTAACGGAGTTTTGCAAGAGGCATCTATGGTGACGCGTAGAGCTAGCACCAACCCAGAAGGTTCAAATGTAATGATTGAATGAAGATTTGACTTTAGCTGCAGCATTACACGCAGTATTTATATTTGACTTGTGAAAATTGTTGATTTTGTGACAGCAATTGTGTATGTACTGCCCTTTTTGTACACCATCTTCTCATGTTATAGGCTTATGTTTCTCTTAATATATCTGATAGCTTTGGCTTTTTCCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|22478343|gb|BU039589.1|BU039589 PP_LEa0003E13f Peach developing fruit mesocarp Prunus persica cDNA clone PP_LEa0003E13f, mRNA TGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): GTGGACCGTATACCCCCAGCCCTGCTGCCCCTCAAAGTGAGGTATCCACCTCTGTAGGTGCTGACCATAAGCCTCTGCCTGTGGAAACAGTGAATGGGATTTCTAACGGCATTGCAAATGGTGGAAGTGTGAAAGGAAATAATGTTTCAGCTCCCTTATCAACATATCAAAACTCATCTTTCAACTCCAATGGTTCATATGGAAGGGGTGCTTTGCCAGGTCGGGTTCCTACTCCTGGATACCAGGACCCAAGATATGGGTTTGACGGGTTACGTTCTCCCCTTCCGTGGTTGGATGCCCCACTTTTTTCTGATGGGCAGCCTAGACCTGTTACAAGTACAACAATTACTTCTTCAATCTCAAATGGCAATAACATTCCATCTGCAAGGAATCAGAATTACCGTCCAAATTCTCACTTCATGGGTTTGCACCACCCAAGGCCGTTGTCTGGAATGGGCACAGCTCAAGGGTTTATAAATAGGATGTACCCCAACAAACTTTATGGTCAGTATGGAAACACAGTTAGATCTGGTATGGGCTTTGGATCTCATGGTTATGATTCGCGAACCAGTGGACGCGCATGGCTGGCTGTTGACAGCAAGTACAAACCCAGGGGAAGAAATGGCGGATACTATGGATATGGTAATG | |||||||||
gi|84569150|gb|DW340769.1|DW340769 PP_LEc0001D23f Peach shoot Prunus persica cDNA clone PP_LEc0001D23f, mRNA sequence TGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): CAACATTTGCATTTCTCCTATTGTTAAAAACCTGTTTACAACCCTTTAGACCAATGTCGGAGTCCATGAAAATTTGGCCTTGAGTTTTGTTTCAATGCAATATATATATTTCATGCACAAATTAATAAATTTTTGTTCATGAATTATTGCTGTAACTCTTTGTTATTTAACTGCATTGTCCTATCCTTGCATGTTTATTTGGACACAGCATCAGAGCTATCGGTCATGAGAGACAGATACTAAACCCTCAATCAAGATTCAAGACCAACCAATAAATGGAAATCTCATACAAAGTTCAAGTGAAATGGAAATCAAATCTCATATAGACTTTTACAACAAATCAAGCCCAATACAAACAAACCAAACAAACAAACAAACAATCAATCAAGAGTTCAAGTTCAAGACATATCAAATTACAAAGCAAGAAATGGAAATCTCACATAGGCTTTTAGAAAACAAATGAAGCCAAATTAAATTAGGATTAATAAAACTAATTTACTGTTTGGTACAGTATGATACCAACCGGGATCACAATTTGGAAGCGATGTCGTGCCAAACAGTAACAGGATGACACAGTATCATCCCGTTTACAAATCAACACCAAACGGGACGGCACGAAATTGGCACGGTTTGACACGGTTTCGGGATGATTTCGGTATTCCGGTTTTGATGCCCTCCCCTAGTGTTCAGTTTGTTCCCACCACTGGTCAAGTTGCTGACCTCCTCACCAAGGGTCTTCACAAAAGAGAGTTCGAAACTAATGAGAGATACAATAGAATATACAAGGATTAGATCTTTAGTTACGGTACGTATTACCTTAAGAACTGCATGCTAATGCCATTGCCATATAAGAAATTATATAAACATG | |||||||||
gi|84629748|gb|DW343358.1|DW343358 PP_LEc0014N17f Peach shoot Prunus persica cDNA clone PP_LEc0014N17f, mRNA sequence TGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): CTGGTTCCTGGCACATGAGTAATTTTTATGAGTATACATTCTACAAATTAATTGATATGGGTCGACATACATATTCATTATATAGTATAGATCTAGTATAGATCATGTAGATCATGATACATATTTATCCATCTAAATGTCGGAGATATACCCCTTAATATTTATATATTAATATATATATCATATGTATATATAGTATACAAAAGAATTTTATTTTGTTCCCTCTTGTTTTTTTATTTGTCCATACTGTGTCTCCTCTCGTTCAAAAAGAACGTTAATACCTCATACATATTCGAAAGAGTAAATCAGTTAGTTGAAAGACAAAAAAGTATAGTCTAGGGGAATTGAGGGGTGGGAATAGCCAAAATGCATCTCAGATACAGTACAAATAGAATATGATATTTTTTCATTTCCTTATATATTATATATATATTTTTCATATTATATTTCTGCATTTCCTCCTATCTTACTTTCTATAGCCCATCTAAGTGATGTGCGCGGTACATAGTTCATGATGCGGAACTCTTTTAGTTTCATCCTATTGGCTCGGCTCATTCGAAAAATATCTTCAAAATTTTTAGAATCTCAATGAATCCTCTTAATTTTTTTAGTATTTTTTTTTAGCTCACCCCAATAAAAATAAAATAAAAAATAAATATGTGAATGAAACTTCAATTACCATGTTTGATCTCCTAAGAGAATGTACAAAATTTTTTTT | |||||||||
gi|84631089|gb|DW344699.1|DW344699 PP_LEc0020D08f Peach shoot Prunus persica cDNA clone PP_LEc0020D08f, mRNA sequence TGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): AATAACAGTTGTATTTTTCTAATTCCTTCTGTTGGTTTTTCGGCCTTCAACATGTGGAAACAAAACAACCAGTACAAACAAGTTATTCTAAACCCAAAAAACAAGGTACAATTTGTAATGATAAGATTATCCTCTCATCAATTCAGAATATCCTTTTCAATTGAAAATTGTAGTATTCACTCGGTAGCTGGAGGTCCAAAGAATTCAACCAGATCCGTCAAACCATAAACCCAAAAAAGAAGAAGTACCTAACTGTAATTATCCAATCATAATTCAGTTATTCTATTAGGGTTCTTCATTTTTCTTTTTTCCAAAGTAGTGTGTGAGATAGAAATAGAATTACTTGAAAAAGAAAAAGAGCTACTAGACATGTATTTAACAGGAGAAATGACAATTACTTGCACATGGAGCGAAAAAGAAAGAGAAAAGAAAGGGAAAAAAGAAAAGAAAAAGAAGAACTGATTGACAGACAGACACATGGCAACTTGCCAAGGGCGTCTAATCAAGTGGAGCCGGCGGCGCCAGAAGTTGAACCGGAGAGCAGCTGGGCGAGCCGGCTCATGGCCCGGACCTGCATCTCCAGAGCTGCGATGTAATCAGTGGCTTCTTCTAGAATGACCGGCAACGGTTGCTTTCGGCAACCGGGAACCAACCGGCCCAGAACCCGGACTTTCTTCTGCACAGCTGGCAAACCCTTGCCTTTCAGCCGGTAAACGCTGAACTTGGGCTTCCTGGGGTCGGTCGAACCGGTACCCGACGCTGCAGCGGCGGATCTCTGTCGTTTATGCTGCCGGAACTTGATTTTTTAGCGCTGGTGAGAATGGCGCGGCTCCAGCGCGTCCTGCCCTTGGCTGCGACGGCGAGAACTCTGTCGGGCGCTTCGCGCACGGCTCTGCCGCGGCGCGGAGGAAAAAAAGAGGAGGGGTTGGCGTTGGGTGTTGTGTTACCGNGGTTGGTGGGTTTAATGGAAACCTGACTTGACGCTTGAGGGAGCTTGAAAAATTAAAACTGCTGCTGGGCCTCGGATTTCCATTGGGGGGGTTCTGGCTTTCTGCTGCTGCTGGGGTCCTGTTTGCCTGGAATTTCTCCTCTTTTTCTTCCAAAAAATTCCAGGGG | |||||||||
gi|84633933|gb|DW347543.1|DW347543 PP_LEc0022D14f Peach shoot Prunus persica cDNA clone PP_LEc0022D14f, mRNA sequence TGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): GGGGAATTGAGGGGTGGGAATAGCCAAAATGCATCTCAGATACAGTACAAATAGAATATGATATTTTTTCATTTCCTTATATATTATATATATATTTTTCATATTATATTTCTGCATTTCCTCCTATCTTACTTTCTATAGCCCATCTAAGTGATGTGCGCGGTACATAGTTCATGATGCGGAACTCTTTTAGTTTCATCCTATTGGCTCGGCTCATTCGAAAAAGTATCTTCAAAATTTTAGAATCTCAATGAATCCTCTAATTTTTTTAGTATTTTTTTAGCTCACCCAATAAAATAAATAAAAAATAATATGTGAATGAAACTTCAATTACCATGTTTGATCTCTAAGAGAATGTACAAAATTTTTTTTTAATATCTGGAGAAGTGAAGATTATTTTCTGATTATTCAATAAGCATCTTGTATTTCATAAAAATTAGGGGCAATATAATCCTTACGTAAAGGCCATCCTATCCAACTTTCAGGCATTAAGATACGTTTCAGGCGTGGATGATTATCATAAAAGATTCCCAACATATCATAGGATTCCCTTTCTTGAAAATCCGCACTTTTCCAAACCCAGAAAATAGAAGGAATTCTAGGATTCCTCCTTGGGGCAAATACTTTTATGCATACCTCTTCTGGTTGATCTATACCATACTCTATTCTCGTAAGATGATAGACACTAGCTAACAGTCCGCCCGGTGCTACATCATAAGCACATTGGGAACGTAGATAATTGTAACCATATACATATAAAATGACAGCAATCGAATGCCAATCCTCGGGTTTTATTTGTAAAGTTTCTATTCCTTGGTAATCGAAAACTCAAGATCTATGAACTAACCCATGTTTGACTAACCAAGCGGACAAACGACCCTGCATCTTTTTTATGTCTCCCACATTTTTATTTGTATTAAGTATTTCACATTTACCGATGAAATTTATGAAGAATGGACTCCGCCCTTTGCTTTTGGTATTCCTGTACTTTTGGTTATTCTGTACAAAAAAGAATCCTGCCTAAATTTCCCTAATTTCGGGGGGAAGGCTTCCTGAAACTTTTTAAATTTTGAAAAAAAAA | |||||||||
gi|51919746|gb|AJ826224.1|AJ826224 AJ826224 S4 Prunus persica cDNA clone S48P14, mRNA sequence TGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): GCACGAGGCTCTATGCTAACCCTCCTCCCTGCTATCAGTTTCAACATCTTCCTCTTAGACCATACACTCTACTTTTTAGCTTCTGATTATTTCATCTCTGTTTTCTTTTGTCTGCTGGATCAATGACAGATTAGCATTTGCAGTCATGCATCCACGCATTCAGGAGTAAAACTTCCACCTGACACCGTTTCTCTCTACCGATGTGATGAGAAATATAAACAACGGTGGATGAAACATGGGATATTCAAGTTTTGCAGCTCATTCAGGCTATTGTTTTTCCTTTTCCTGCTCGATGATTAATGTCGTTAATGTCGACTAGTTGTAGCATTTTGGTGGAATGATGATGTTGATGTTGGCGTGGCTCAATCAAATCAAACTTCTCAACTGTTTATTGGGTCCTTTAATTTGATTGAGCCGTGCCAATATCATTATCAGTCTCCAAAAACTCATCAACCAACAACTTTAGAAAACACAAACCCATAATAGGCGATAGTTTCCTTGGATTATTAAGGTCGCTTGAATAACACATTGTTGATTTTATTAAAAAAAAAAAAAAAAAA | |||||||||
gi|84629666|gb|DW343276.1|DW343276 PP_LEc0014H24f Peach shoot Prunus persica cDNA clone PP_LEc0014H24f, mRNA sequence TGAGCCGTGCCAATATCA EST sequence (targeted fragment marked with yellow): CCCCCGGGCTCGCAGGCCTCGTTGTTCAGTGGTTAAACAATTGGCCCAATTGGGACGGCTCACAGACTCCATTTTCTCTCTACTTTGTTTTGTTGGAATCTTAGTTATCTCCAATAGAATCTCATGTTTTTCCACTAAAAAACAGCCTCGTGATAAATCCTAGGTAACAATGATATGATACCATAAGCCAACATGAATCTCCTTGAAAACTACAATCAACTTCAATTTTATCACACTTAACAAAGCACACAAAATGAATCATTTATATACATGAAGTTTCTGGTTCAAATTAATACTGAATTGAGCAAAGGAAATTACAAACCCTAATCTTTGAGATTTTGGCATGGCTCTACAAATTGAAGACCAATATGTTGAGTCACTTTCCTCCCATGGGGCACAAGCCTAAGTGTCAAGAATTTCATCTGGTCCACAGAAGAATGGCCAGAAATTAACCATGATGACTTTGCAAATGCAAATGACACCCCTGTCATAAGCCTCCAAGGGGTTTTTGGAGGGGAGGAAAAACCCTGACTATGACAAGGTTTGCCAAGTCATGGTGAAGGCTGGGGAGAAGGGGGGGTTCTTCCAAGCAAGTGGATCCTGGGGTTGCCCTGGAAAACCTAGAAAGTTTCATAGGGAGCTTAAATGGGCTTTTTGATCCTCCAATGGACAAAAATTTGAAGGGGGGTAAATCACCCAGCTTACCCCCGGGGTCCTCAGCCCACAATCCCTGATATAGAAAAAAATTTTGCTTTGGGCGAAAAATCTTGCAATTTGCCCCAAGCCCCCACAAAAGGGAATTGGGATTTTCGCTAAAAAGGGTTTTTGGGGGGCCCAACACCCCCCCCTTTTTTGAGGAAATTCCAAACCCTCCAAAAAAATAGAAAATTCCTGGGCCCAAGATTTAAAAAACCATAATTTTTTGATTGCTTCCGGGAATTTTTTGGGGGGAGGTAACAAGGGCAAAGGGGCACAATTAACCTTCAATATTGGAAAAAGGGGGGTTTCTCAAAATT | |||||||||