| mature miRNA: TGAGCCGTGCCAATATCACG species: Euphorbia esula database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|76854290|gb|DV145283.1|DV145283 CV03138B2G01.f1 CV03-normalized library Euphorbia esula cDNA clone CV03138B2G01.f1 5, mRNA se TGAGCCGTGCCAATATCACG EST sequence (targeted fragment marked with yellow): TGGAGAAGGGCTCCAAATTTCCCTTACTGTGAGATTGAAGGAATGGGTTATTTTGCTGATGGTAATCTTCACTGGCTGTGCCAACTTTTGAACAACAGAGATATCAATCAACCTGATGATTTGAGAAAGGAAATTGTTGCCTTAGATGTAGGGAAAGAGACATTCTCTTTAGTGTCTCCACCCGTAATTTTCTCAAACTCAGTGGTCGCAGTTTGTTCGAGATTGCATGTTTTAGAAGGGTGTCTTTGCATCTGCCATCTGTTTGGTTTTCCACTGTCTCAGGCTGATTTATATATGAGGAAGAAAGATGGAGTTGACAAGTTTACTTGGACAATGTTGTTCTCTTTTACAGAACCATTATCTTTTGACTCATATTGGCTTTCCTATCTAAAGGTTTTGGGATATTCGAAGAAGAGTAGAGATAAGATTCTGCTTGATATTGGTACGGCTTATCTGGTTTCATATGATCTCACACAGAAAAGTTTTGGGAAGCTTGAAGTAGGCATGGATCCTTCCCAGAGAATTTCAAACCTTTGTATTGAAAGTGTTTGCCTTGAAAGTCTTGTGCCGGTAGGTAGTGAATTATAGTTCTTGAAGTAGACAAGGATCCTAGTTGGATTACTCCAATTCTTTGTCCTGAAAGTCAGTGAAACATAGTTCTTGAATGACCTTTGAAATAGCATATTTATCCGGTGAATTGACGAATGAATCAGNNNCTTACACTGCACTTCTTTGCGTGAATTTGGAGGGGAGNNNNAGATCAGGAACAAGGATGGAGTTGATCAGC | |||||||||
gi|76863757|gb|DV154750.1|DV154750 CV03095B2G09.f1 CV03-normalized library Euphorbia esula cDNA clone CV03095B2G09.f1 5, mRNA se TGAGCCGTGCCAAT-ATCACG EST sequence (targeted fragment marked with yellow): GGGAATNNCTAGTTGACTTGGTAGGGAAGCCAGGTTGTTTATCTGAACCTGATTCCTTGCTCAATGGTCCTGCTTCTATATCAATTTCTTCACCATTGCGATTTCCCCGAACCAAATCCACTGAGTCCACAATTGATTTCAGGTCCTTGGCCAAACAATACTTCTCAGATTGTCAATCACTCAATCTTGTTTTTGATGATGCTGCGGCAGGTACCATTCTAGATGAAGCAGCTTCTGAATTCTCCATCAAGACAGATGCAGATATTTCTCAGTTGCCTCTTCCAGTTAAAGCTGTTCGGACAATTGCCCAAGATAGAAATATTCAAGTTTATAAAACATTTAATCCTTTAAAGCATCTCCCACCCATTGGACACATAGATGCTCAATCACTCTTAGCATTGGCTGATCAGAATATGGATTCAACTAAAATTTCAAGATTTTCTGAAGGCAGTCAATTGCTTTCTGGAAATTCAAGTAAAGAGCCTTCCTTTGATGTGGAAGATTTGGTTATTCCATGGGGTGATCTTGTTATAAAAGAGAGAATTGGAGCAGGTTCTTTTGGAACCGTTCATCGTGCTGATTGGCATGGCTCAGATGTTGCTGTGAAAATTCTCATGGAGCAAGATTTTCATGTTGAACGCTTCAAGGAATTTGTGAGGGNNNTTGCAATAATGAAACGCCTAAGACATCCAAATATAGTTCTCTTCATGGGTGCAGTTGTTCAGCCCCCAAACTTATCCATAGTGACAGAATATTTAT | |||||||||
gi|76831363|gb|DV125063.1|DV125063 CV03041A1H07.f1 CV03-normalized library Euphorbia esula cDNA clone CV03041A1H07.f1 5, mRNA se TGAGCCGTGCCAATATCACG EST sequence (targeted fragment marked with yellow): CGACAGCCANTGCGGGTTTTGGTGTTGTCGATCAAGGTTTTGGGCTTGAAAACATCGCTGGCAACCANNNNTTTTAACCAAACCCCCAATTTTCTACCGCGGGAGATGGAGGAAAAGCCGCAGATTTTCAATCCCCAGATGATAATCAACCAAAATCAATCTCAGTTTAGTCAAAATCAAGCTCATTTTCTTCCATTACAATATGCCCAATCGCAAGAGCATCATCTCCTCTCTCCACCGCCGATGAAGAAACTAAATTCCGGCCATATGAAGGTACACAATTTCCCAGATTCAGCCTCGCCTGAGGCTTTTCTCCTGCAAAATCATCTCCGGCAGCAGAAAATTCCGGCGGCAACAGATGAACAAACAGCACAGCAGCTCCAGCAATCGGTAATTCACCCAATTTGCCAAGCAGCAGAGCTGATCGGAACCGGAAACCCGGCACTCGCGCAAGCGATATTGGCGCGGCTCAATCACCTACAGCTCTCATTTTCCGTCGGTAAGCCTCAATTTAGAGCTGCTTATTATTTCAAAGAAGCTTTACAGTTCCTCCTCAATTCCTCCTCCTCATCATTGTCCCCCTGTAATCTCATCTTCAAAATCGCTGCTTTCAAATCCTTCTCCGAGATCTCACCGGTTCTTCAATTCTCCAATTTCACTTCTAATCAAGCTATCCTTGAATCCATTGATGGGTTCCAGAAGATTCATATAATTGATTTCGATATTGGGTATGGCGGGCAATGGGCTTCTCTTATGCAAGAATTAGCTATAAAAAATGTCTGTTCTGGTTCGAGTTCCGG | |||||||||
gi|76850908|gb|DV141901.1|DV141901 CV03129B1F03.f1 CV03-normalized library Euphorbia esula cDNA clone CV03129B1F03.f1 5, mRNA se TGAGCCGTGCCAATATCACG EST sequence (targeted fragment marked with yellow): CATTAAACGAAATCCGGACGGGTCAGTTCATCGTTACAAGGCTCGTCTTGTAGCCCGTGGGTATAGTCAAATTCAAGGTATTGATTACATTGAGAGCTTTTCTCCGGTTGCAAAAGTTGTCACTGTTCGTTTATTATTTGCCATTTCCGCTGCTAAAGCATGGCCAGTGCATCAAATTGACGTAAATAACGCATACCTTCATGGTTTTGTGGATGAAGAAATTTACTTGCAACCACCTTTGGGATATACCAAAGCTCAGCCCGGTCAGGTTTGTCGCCTTAGAAAATCTTTGTACGGCTTGAAACAAGCCGGACGTCAGTGGAATAAGGAATTTACCACTCAAGTTATTGCTTTTGGTTTTAAACAGGCTGCTTCTGATCATTGCTTGTTTACATATTGCAAAGATGACATTTTCCTTATACTTCTTGTTTATGTGGATGATGTCTTGATCACGGGCAATTCGGATACTTCTATAACTGAAGTTAAAGCACATCTCCATGCCCTTTTCACTATTAAAGACATCGGTCATGCTAAATACTTCCTCGGAATTGAAATTGCTAGAGATTCAAGTGGTATATTTTTATCTCAACACAAGTATATTTCAGATTTAATTTCCGAAGCAGACCTTTGTCAAGCTAACCCTTCTCCTTGTCCAATGCAACCGGGTATTCTTTTAGACCCTGAAGTTGGCACGGCTTATTCGGAACCCGACAAATATCGTCGTTTTGTT | |||||||||
gi|76861327|gb|DV152320.1|DV152320 CV03088B1F04.f1 CV03-normalized library Euphorbia esula cDNA clone CV03088B1F04.f1 5, mRNA se TGAGCCGTGCCAAT-ATCACG EST sequence (targeted fragment marked with yellow): GAAGCCATGTTGTTTATCTGAACCTGATTCCTTGCTCAATGGTCCTGCTTCTATATCAATTTCTTCACCATTGCGATTTCCCCGAATCAAATCCACTGAGTCCACAATTGATTTCAGGTCCTTGGCCAAACAATACTTCTCAGATTGTCAATCACTCAATCTTGTTTTTGACGATGCTGCGGCAGGTACCATTCTAGATGAAGCAGCTTCTGAATTCTCCATCAAGACAGATGCAGATATTTCTCAGTTGCCTCTTCCAGTTAAAGCTGTTCGGACAATTGCCCAAGATAGAAATATTCAAGTTTATAAAACATTTAATCCTTTAAAGCATCTCCCACCCATTGGACACATAGATGCTCAATCACTCTTAGCATTGGCTGATCAGAATATGGATTCAACTAAAATTTCAAGATTTTCTGAAGGCAGTCAATTGCTTTCTGGAAATTCAAGTAAAGAGCCTTCCTTTGATGTGGAAGATTTGGTTATTCCATGGGGTGATCTTGTTATAACAGAGAGAATTGGAGCAGGTTCTTTTGGAACCGTTCATCGTGCTGATTGGCATGGCTCAGACGTTGCTGTGAAAATTCTCATGGAGCAAGATTTTCATGTTGAACGCTTCTAGGAATTTGTGAGGGAGGTTGCAATAATGAAGCGCCTAAGACATCCAAATATAGTTCTCTTCATGGGTGCAGTTGTTCAGCCCCCAAACTTATCCATAGTGACAGAATATTTATCAAGAGNTAGCTTGTACAGGCTCTTGCATAAGTCTGGTG | |||||||||
gi|76853976|gb|DV144969.1|DV144969 CV03138A1C11.f1 CV03-normalized library Euphorbia esula cDNA clone CV03138A1C11.f1 5, mRNA se TGAGCCGTGCCAATATCACG EST sequence (targeted fragment marked with yellow): CCTACNNNTGGAGGAGAGTATCCGGTAGCTGTAACGGTTTGCTTCTCTTGCATCGAAGTGAATTGAGTCTTGCTTTGTGGAATCCATCCACCAGGCAGTATAGGGATCTTCCTCGTTGCCCTTTGGACAAACCAGCTAACTTCTTTTTAGGTCGTCTTCGTCTTTCCCTCAGATTTGGATTGGGTTTGGGTTATGATGACTCTACTAATGACTACAAGGTTATATTAGTGAGATATTTGCAGCGGGGAATATCTGCAACTGAAATTCAAGTTTGGATTTACGGATTCAAATCAAACATTTGGAGAAGGGCTTCAAATTCCCCTCACCGCAACCTTGAAGGAATGGGTTATTTTGCAGATGGTAGCCTTCACTGGCTGAGCAACAGAGATATCAATCAACTTACTGATTTGAGGAGAGAAGAAATTGTGGCCTTAGATGTAGGGAAAGAGACATTCTCTTTAGTGTCTCAACCCATCAACTCAGAGGTCACAATTGATTCGAGATTGTATGTTTTTGAAGGGTGTCTTTGCGTCTGCTATTTCTATGATTCTACACAGTCTCGGTCTGTTTTATATATGAGGAAGAAAGATGGAGTTGATAAGTTTACTTGGACAATGTTGTTCTCTTTTACAAAACCATTATCTTTTGACGTAGATTTGTTTTCCGATCTAAAGGTCTTGGGATATTCGAAGAGTAGAGATAAGATTCTGCTTGATATTGGTACGGCTTATCTGGTTTCATATGATCTCACACA | |||||||||