mature miRNA: TGAGCTCTTGCACCTCCTTCAGTAA species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
Predicted miRNA targets | |||||||||
gi|60711420|gb|DN501230.1|DN501230 UM74TH11.5pR Populus female catkins cDNA library Populus trichocarpa cDNA clone UM74TH11 5', TGAGCTCTTGCACCTCCTTCAGTAA EST sequence (targeted fragment marked with yellow): GAGAGGAGGGAAAAGGAGGTATTGAGCCAAATAATCAGGAAGCTGAAGATTACAAAGTTGAATTTTACAAGAAGAGGCAGTTCACTTGTGAGAATAATAAAACCACTAACAGGGAAAAAGAGAAGTTATTTCTGGTCAACCAAGAAAAATTCCATGCTGAGGCTGATAAGAATTATTGGAAGTCAATTGCAGAGCACATTCCTAATGAAGTGCCAGCTATAGAGAAGAGGAAAGGGAAGAAAGATCAGGATAAGAAGCCTGCTATTGTTGTGATCCAAGGCCCAAAGCCTGGGAAACCGACTGAACTCTCAAGGATGCGGCAAATACTATTGAAATTGAAGCATGATACACCTCCTCACCTGAAGCATTCCCCAGCAGCAGCATCATCCACTGCTAATGCTGCTAAAACCTGTGATGCCACAGGAGTAACTACTTCCACCAAGGCTAATACTGTGGTGACTGCTCCTGAGCCTGTAGCTGTTGCTTGATAATTTTGTTTTTGCTTTCATTCTCCATTTATTGAAAGAGGTGCAAGAGCTCATTAGAATTTGGTTGGTTTGGCTAATCTTTTTAGATATGGTTCCCTGTTATCCTAGACTGCTTTTTTTTGTCTTCATTGTGTACACAACTAGGGCATTTGAGCAGGTTTATGATTTGATAAATTGCTTATAAAATTTCACAACAGCTTTTTCTAAAAAT |