| mature miRNA: TGAGTTAATTAAGTTTTTATG species: Zingiber officinale database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|87105454|gb|DY372238.1|DY372238 ZO__Ef0005N09.r ZO__Ef Zingiber officinale cDNA clone ZO__Ef0005N09 3', mRNA sequence TGAGTTAATTAAGTTTTTATG EST sequence (targeted fragment marked with yellow): CATAAGAAGAAGCAGCTTTGCTTGCGCGCGATCCAAAGAATCCGCAGCGATCTTGATCGAGCAAAACACTAGACAGGGCCGTCAATATCATCTTCAAGTTGCTGTTCAAATCTATCCCAGTAATATTAAGATAGTTCACATGCCATCTAATCTTGTCCAGAATCTGAATCGGATAAAGAACAGATGAATTATTCCTCGTGCCGAATTCGGCACGAGGCTCGAATGCGAGTTCGGTGGCAGCCACCACTCAATTAAGTAACCCATCCAATTGCACGATTAAATATTATAAAAATTTAATTAATTTAATTTTAAAAAATTCAGTCTCTATTTTTTTGTAAATTAAAATAATAAAGTTTGTGTTTTGAACATAATCTAACTTAAATAAATAAATAATTTCATAAATTAAAAAAATGGCAAGTAGCTACGGATGATGTTGGATTTCCCTTGAGCGAATCTAAGCCCCAGGAGCTCAGATCTCAGTTACTCCGATGTCAGAGCGGGCGATCCTCGAGCGAGAGTCAGAGAGCTAGCGAGGTTCCCTGGGCCGCCGGAACCGGGCCGGTTAGAAGAAGGGGATACCTCTGCAGGATGTCGGAGGCGGTGGAACCGCCGGACTGGCTGCCGGATGGATGGATCATGGAGGTCAGGAAGGGGAAAATGGGGCGCGTCTATCGGGTAATCGACCTGAGTCTTCTTCGCCTTCTTAACTGATCCTTCCCTTTATCCTGGGTCGATCGGTTCTGCGTCTGATCAATGAAAGGACTATGACAGGAGACCATCGACTTCCCTTATTTTGACAAAGCAGATCAACCTTCTGCCTTGTGGATTTTGTTTATGCCTTTTTTGTTTTGACGAGCAGTGCCCTAATAAAAGCCGCGATTTTTCGCACATTTTGAAGCAAGGGAGCCCATTGGCAGCACATCGATCACATAAGATTTTCGCGATTTTA | |||||||||