| mature miRNA: TGATTGAGCCGTGCCAATATC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|52388076|gb|CV232487.1|CV232487 WS0197.B21_L22 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS0197_L22 3', mRNA sequence TGATTGAGCCGTGCCAATATC EST sequence (targeted fragment marked with yellow): CTAAAAAATTAACCAGGGATCAAGTTGCTGTCCTGGAACAAGCTGTTGATGTCTACACTTATGAGTTCAGAAGGTTCATCACCTTCATCAGTGAGGTATTTGCAAATTCCCCTTTCTTTATTTCAGCAGAAGCTGCTGGTGCATTAGAAGCTAGAAACAATGATGACTACAAGGAGATAAATGTTCCAGCTGGGAAAACTCACGAGGTTTCATTGTCTGTGGAATCAGTGAACTCATACATTGCTTGGGATTTCAGTTTGATACAAGGCAAAATTAACATGGATATTGGATTTAGTGTGGAGTGTACAGACCCTACAGGGAAAAAAACTCTGATACTACCATATCGACGTTATGAGTCTGACCAAGGGAACTTCTCCACGTGCATATCTGGAAACTACAAGCTTATTTGGGATAATTCATATTCTGCATTTTTTAAAAAGGTCCTGCGTTACAAGGTGGACTGTATACCTCCGGTTGTTGAGCCAGTGCAATCTGCAGGTGAAATGGAAGAATAACTGTCGCCTCCTTAGCTTTAGCATTTGCGCCAAGATGCTGTCTCATGGTGATTTGGATCAAATTTATTTGTACTTGTTGCCTCTTCCTTTTTTTTTTTTTTTATCACATCCGATGAAAGAATGTTGCTTCTTGGTTTTGGCACGGCTTAATCCGCCGCTACACTAACTTGTTCTATGTTACCTGACAATCAGTATAACCCCATTCATCCAAAAAAAAAAAAAAAAAA | |||||||||