| mature miRNA: TGCACTGCCTCTTCCCTGGC species: Prunus persica database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|209179051|gb|FC862481.1|FC862481 PPN065F03-T7 PPN Prunus persica cDNA clone PPN065F03, mRNA sequence TGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): GGGGACTGAATCGCAAAATCGAAGACGACAGTAGGTAGTAGCCGTATATACATGAACGAAGGATAATGGTGGCGCAGCTCCTGGTGGGTCCCATCCCCATCAGCGGCGGCAATGTCAGCCCCGGTGCTGGTGGCTTCTATTCTAATTTCAGCCATTTGTTTTCCCTACCATGTCATTTTCAGCGTAGAAGAAGAGGGAGAACCCGTACTCGCCGGTGGACACCACAATCAACGTCATCATCGTGGTCGTCGTCGTCATCATCATCATCATGGGCCATGATTAACGGCCAGCAGACCCACTACGGCGTGCTGGGCCTCTCACGCCATGCCACCTCCTCCGAAATCAAGAGGGCTTATCGCCTTCTCGCTCGTAAGTATCACCCTGATGTTAGCAAAGATTCTCAAGCTGAAGAGGTGTTCAAGAGTATCCGTCAGGCATATGAGATTCTATCTAATGAAGCAACCAGGACTCAGTATGACCAAGAACTTAAATTTCAAAAGGACACTGGCAGGAAATACAGTGGAAAATGGAGCTACAGCCCTGAATTTGAAAATGGAGTAAGGATCTATAAGTGGGCTGAAGTGAGGCAGATAATGCAACAGGAGAGACATTGGGAACGCTATCATGTCAATGAAGAAAGTTCGTCATATGGTAAAACTGATGAAAGCACTGAAAGAGGAGAGGCAGTGCAAGAGAGAGGTTCCTTCAGTGAAGTGCTTAGATCTGCCTTT | |||||||||
gi|89487934|gb|DY643728.1|DY643728 PU3_plate33_D07 PU3 Prunus persica cDNA similar to expressed mRNA inferred from (AB023041) un TGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): CGAGAGACAGGCAGATAGATAGAGAGAGGGGGAGAGAGAGAGAGAGATAAAACTCAAAACTTGATATTGTCAACAGTCAACACGAACAGCTCATCAAATTCTCTTTAGAAAAGATAGTGGGTTGGTGATTTGAAGAAAGAGGCAAGGGCAGAGGCAGAGCATAATTTATGTAGCTGGGTATTCCGGTTATGTCTATCGCCGGCGGCTGGAGGCTTTTGCACTCTTCTCTGGTGGTGATTTTGGTCATTTCTGTGTTACAGATTTGGGTCTGCTGTGACTGCAAAGCAGGCGCAATACGGGTTTTCCCAGGACACACAAATGCGTTATCAAAGGGGGAGGCAGAGAGCAGCAACACGATGCAGAGCAAGAGCAACAGAAGCAGAGAGGCCCTGTTCCATAAGTACTTCGGTGGCAGTGTCAGAGCTTCTAAATTCAACAAAACAGAGCAAGGGTATGAAGACAGCAAACGAAGAGTGCCCAGTTGCCCAGATCAACTCCACAACTAGTAAAATTATTCATTTTCTCTCTTCTTTTCTTGGGAAATTTTGTTGAATTATAACCAAAATACCCACGTTTTTCTCATTATGTCTGTGGAAATTTGATGGCCTTTTCTTGCTTCTGTATTCATGAGTGGGAAACCGGGGTAT | |||||||||
gi|282845568|gb|GR410621.1|GR410621 IB583 RD Prunus persica cDNA, mRNA sequence TGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): CTGCTTAGCCACTGTCTACACTGTGTGGAGACTCCTCTGGCTGGACTAGTGGTGTTGATTATAGCACTTGGACTAGTGGCAAGACCTTTGCAGTTGGTGATAGCCTAGTGTTCAACTATGGAAGTGGGCACACAGTGGATGAAGTGAGTGGAAGTGACTACAAGACATGCACAGTGGGCAATTCAATCACAAGTGATAGCAGTGGAGCCACCACCATCCCTCTCAAGGCTGCTGGGACTCGTTACTTCATTTGTGCTGTGGTTGGGCATTGTGGGATGGGGATGAAGGTTTCTGTGAATGTAGTAGGGTCAGGATCAACAGCAGCACCAACTACCAAGGGTTCACCGTCACCGGCTACTTCCGGCGGTAACTCTACAGTTACTAGCCCTGCAGTTACCACACCGTCAACAACAGGCGTAGACAACAGTCTATCTACCTCTCCGGTTGTGGCTTTGTGGAGTATTTGTGTTACTTGTGTTGCTATTTGTGTGTTGATTCTTTCATAAGTTTGGCAGGCTGGTGATTGCTCTAAATATTGCCAGGATAGAGGCAGTGCTATTTTCTCCCTGTTTTATTAGCGGTGATTTGAGTTTCTTATGTTATAATTATTTTGAGC | |||||||||
gi|209177806|gb|FC867363.1|FC867363 PPN026A05-T7 PPN Prunus persica cDNA clone PPN026A05, mRNA sequence TGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): AAGTCCAGAGAGAGAAACACATTCAGAGATGGATATGGGCATGAGCTTGAGTTTTTCTCTTTTCCTTGTGCTTATTGTATAATGAGCAAAGCTTTTATTTTCTTCTTCTCTGAAGAAGATGGCTCTGCAAGAAGAACCCCAAGAGCTACAGAACCCTCCAATGGCTTTTGACGCTTTGTTTTGTGAAGAAGGTCTTGAGGAAGATTTGGGAGACAATGGTATTGAGGAAGAGAGTGAGGGTTGTGTTGGGAATATGGAAAAGCAGTCAACTTTCCCTCTGGTTTTGCTAGAAAATGACCTCTTTTGGGAAGATGATGAACTTGCCTCTCTAATCTCCTAAGAGGAACAGACCCATGTGTGTTTCAGTGGTTCAATCTCAGATGGGCCTTTAATGGCGGCTAGGAAAGAGGCAGTGGAGTGGATTTTGAGTGTTAAGGCACACTATGGGCTCTCTTCTTTGACTACTGTTTTAGCTGTGAACTACTTTGATAGGTTCATTGCCAGCCTACGGTTTCAGAGGGACAAGCCTTGGATGAGTCAGCTCGCTGCCGTCGCTTGTGTGTCTTTGGCTGCCATAGTGGAAGAGATCCATGTGCCCCTTCTC | |||||||||
gi|84569444|gb|DW341063.1|DW341063 PP_LEc0001I10f Peach shoot Prunus persica cDNA clone PP_LEc0001I10f, mRNA sequence TGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): ATTCTGGCACGAGGCAACCGAGCTATCATATCCTGAAGCGTAATGCAATAGCGAACTTCGGTATGGAAGGTGTTGATTCAAATCAGTCACGCCCACAAATGCACGAAGATACGCATATAAAAGCCTAACATATAGATTACACTCAATTTTAACCTCTACCCCACGCCTAGTGCCTGAAAAACCCGAAATTGACGAAACCCAATTCTCAAATTTAAACCTTTTGTTCCTTTTTATCGAACCACTGTCACAATTTTCACTATTGCCGCGACAAACAGGGTAATAAGCGAACCAAAACATGTAATATTCAAACACATTGAGCTGAACTTGACACAAGTTAGGCTTGGTTGGGTCTTCCTTAACCCTATTTTTAAAAATTGGGTCCAAATCAGATAATACCGGGCTGTAATTTTCAGAGGAGAGCATGAATCGGACCCATTCTGGCAACCGTTCGATGGGGAACACGTATTTGACGAGGGAGAGGCGGTCGACGGCGGAGATATAATTGAAGAGGAGGCTGCTGGGGGCGAGGAGGGCGAAGAGCCTTTTGGCTAGGTCTACATCGTTGGATGCGAGGACGGTGTCGATCCAGCCGTTGGATGAGGAAGACGGGGAGGAGGGTGATGCCTGTTGGTGCTGTGATGGTGGCGGTGGTGATGACGAAGCGGCGTCGTCGAAGCCGAAGAGCTTGCAGATGAGGGTGGGGAAGGTGAGGGAGAAGAAATGGCGGGTTTGGTCGGGTGAGAGGGAGTGCAGGAAGGACTCGATGGAGGCGCAGGTGGAGGAGATCTGGTGCGGGGCGGAGGAGGCGAGGATGGTGCAGGCGAGCTCTTGGGATTTGGAATGGGTATCGACGACGTATGAATGCGAAAGCATGGTAAGAGCGGTGGGGTCGAGTGTATAAAGAGCGAAAGAGAGGGTGAGGCTTTCCGGGTCGCTAGGGTTTTTGGCAGGGAAAAAAAAA | |||||||||
gi|89494775|gb|DY650569.1|DY650569 PU4_plate40_G12 PU4 Prunus persica cDNA similar to expressed mRNA inferred from glucan endo-1 TGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): CTTCGCGCTGTTCAATGAGAATCTGAAACCCACGACGTCGGAGCGGAATTACGGGTTGTTCAAGCCCGACTTGAACCCGGTTTACGACGTGGGCATTTTGCGAAACCAACAGGCAGCGGGTCCTACATCTGGGGTGGCATCCGGACCCAGCTCTGGCGGGGCGGCCGGACCCACATCTGGCGGTGCGTCGGGTCCCACGTCCGGTGGAGCAAGAGCACCGTCATCGTCGGAGAAGAGGTGGTGCGTGCCCAGATCGAACGTCTCTGATGCGGCGTTGCAGGCGAACATAGATTACGTGTGCAGCAGCGGAGTGGACTGCAAGGCGATACAAAAAGGTGGGCCCTGCTTTCAGCCCAATACCGTGAGGTCGCACGCAGCTTACGTCATGAACGCTTATTACCAGTCGGTGGGGCCGCAGGATTACAATTGTGACTTCAAGCACACTGGATTCATCACCACCACTGATCCCAGTTACGATGCGTGCACGTATCCATACAAGTCGGAGAAGTTAGAAAAGTCGGTGGAGGGAGGCTCGATGAAAATGAAAAGTAGCAGAGTAGCAGAGATATTTATGATGGTGGTAGC | |||||||||
gi|89480064|gb|DY635858.1|DY635858 PU1_plate56_E13 PU1 Prunus persica cDNA similar to similar to selenium-binding protein, putat TGCACTGCCTCTTCCCTGGC EST sequence (targeted fragment marked with yellow): TGGAAAGAGCCCCTTTTCCGTTCTTCTTTTTCTTAATTTTCATCATCTTCTTCTTTCTTCATCTTATCACAGCCTTTTAGAAAGAGAGTAGATATAGGAGAAAGAGATGGCTACAGATGTGGCGGTTCCGCAACATGGGACAGTAGGGAAGAGGCAGGGCAATGAAGCAGCATGCTGCAAAACTGGGCCAGGGTACGCCACCCCACTGGACGCCATGTCTGGTCCAAAAGAGGCTCTCATCTATGTCACTGCCGTTTACTCAGGAACAGGAATACAGAAGCCTGATTATCTCGCCACAGTCGACGTAGATCCAAGTTCTCCTACTTATTCGAAAGTCATCCACAGGCTGCCTGTGCCTTATATTGGTGATGAACTGCATCATACGGGCTGGAACTCATGCAGCTCTTGCTATGGAGATCCATCTGCACAACGTCGTTTCTTGGTCCTACCTGGATTAATATCTGGTCGTATATATGCGATAGACACAAAAACAAATCCGAAGGCTCCCTCTTTGCATAAAGTTGTTGAACCTGAAGAGATTATACAGAAGACTGGATTGGCATATCCACACACATCCCATTGCCTTGCTTCTGGCGATTTATTGGTTCATGCCTGGAGATAAGATGGAGTGCTGCAGAAGTGGGATTCTCTCTG | |||||||||