| mature miRNA: TGCACTGCCTCTTCCCTGGCT species: Fragaria vesca database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|158354569|gb|EX662961.1|EX662961 JS1C358JG Salt stressed Fragaria vesca (strain Hawaii-4) cDNA library Fragaria vesca cDNA cl TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): ATTTCTTCATATTTTGAAAGAGATGAACTCTCAGGGAAGAGGCAGTGCCAGATTTACTGTTGTGCAGGTGGTTGCAGTTCTACTATGCCTCATGGCAGTTCAGTATGTTGATGCAGCTACCTACACAGTTGGAGACTCCGGTGGATGGAGCTTCAATACTGGTAAATGGCCCAACGGAAAGCAATTCCGAGCCGGTGATGTTCTAATTTTCAACTATGACTCTACACTTCACAATGTGGTAGCTGTGGGGAGGGGTGGTTATAGCAGCTGCACAACCCCTAGAGGTGCCAAGGTTCTGACATCGGGGAATGATCGGGTGAAGCTCGCCAAAGGACAGAACTACTTCATTTGCAACTTTCCAGGCCACTGCGAGTCCGGGATGAAGGTTGCCATCAATGCTGTCTAATGGTCGATTTATGTACGTACGCTAGCGTTTATTAGTCTAATATATCAATCCGCAATAAGAAAAATGTCACGGCCGGTTAGTCGGACATAATAGAACCGTGGACATATAAGACGGTTTTATGTATTACATATTGAATATTTGATTGTGAAACTTAACGC | |||||||||
gi|89544465|gb|DY668760.1|DY668760 STRB732JX cold-stressed Fragaria vesca seedlings cDNA library Fragaria vesca cDNA clone STRB7 TGCACTGCCTCTTCCCTGGCT EST sequence (targeted fragment marked with yellow): CGATAGACCTAATGGCGAGCAGCGGTGGCGGCGACGACGACGCCGATGCGGTGCTCAGCGACGTGGAGGGAGACGATCCAGTCCCGATCGTGATCAAGAATCCCTCGCCGGAGCAAATCTCCGCCGACCGGTTCCGCGAGCTCCTCGCCGAGCTGGATCGCGAGCGGCACGCTCGCGAGGCGGTGGAGAATTCCAAGTCGGAGCTGCAGGTCCAGTTCGGCCGGTTGAAGGCTCTGGCGCACGAGGCGATTAAGAAGCGCGACGAGTGGGGGCGGCAGAGAGACGACGCCTTGCGCGAGAAGGAGGAGCTTTCCAGAACGAACGAGAAGGTGACGGCGGAGCTGGCGGAGGCTAACAGAGCTAAGGACGAGGCTGTGCAGCAGAAGGAGGAGATTTCGAGGCAGTTAGACGACGTCGTTAAGGAGAAAGATGGATTGAGAGCTGAGATTGGGAATTCGACGCATATGCTCATGTCTGGGATTGATAAGATTTCAGGAAAGGTTAGGAATTTCAAGAATTTCGCGGCCGGGGGACTGCCGCGGTCGAATAAGTACACCGCCGGACTGCCGGCGGTGGCTTACGGTGTTATAAAGAGGACTAATGAGATTGTGGAAGAGCTTGTTAGACAGGTTGAGGCCACTGCCAAGTCTAGGAACGAAACTAGGGAGCAGATGGATCAGAGGAACTATGAGATTGCTATTGAGATTTCGCAGCTGGAGGCT | |||||||||