| mature miRNA: TGCAGTTGCTGCCTCAAGCTT species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|88730200|gb|CI753815.1|CI753815 CI753815 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGTCTTCGCGTCGTTCTCTCGGAGCCCCCCCTCGCTTAGATTGGATAGGATCGCGCCAATCGCGGTCTCGTCCTCCATGGCATCTGCCCCCCCCCCCCCTAGATTTCCGTAGGAGGTAGCTATCTAGCTTGCTGCCGCCCGTCGCATGACCACGACCCTCGGATCGTGGTGGCCGTTGGCTCCCCGATTAGCTTCTCCCATTGCCGCTCCTGTAGGCTGTAGCCCCAGCCGATATGCTTGCGTTGATTTTGATTCTGTGCCGCCTAGCGACCCGCCTCTCTTCATCTAGGGTTCAACCTTCGAGCCGGCTTCTCAGTTGCTGCAAGTGGAGGCGGCAAGCTAGAGACAGCAACTGCATATCTTGCAAGAAAATCGGTTTTATGG | |||||||||
gi|86844448|gb|CI337728.1|CI337728 CI337728 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCAACAAAAGTTCTTGTGATTTTCTGATAATAGAGATAGTGTAATCGTACATGAGCAGATAATTTGCTCTAACAACCTCAGGTATATTTGTATTGAACATATGATGCCTACTAAAGATTTCCTGGAAGGTCTCTTGGAATTGGAGTCTCTTATTGTTGTGCTGGTTTCATGGTTTAGCAAACAAAGGCAGTAAGCTTGAGGCAGCAACTGCATAACTTGCGGCAAAATCATTGGCAAGATCATCATCCAACAAGTTTCTCGCAAGTTATGCAGTTGGTGCCTCTAGCTTATTGCCCCTGGTTACAAAACCTACAAGAAGAACTAGTAAATGTTAGCACAATCAAGTGTCAAGTATTGTCAATAACAAATATAGTTTTGCTATGTTATTATTACTTTATTAGCCATCCGAAGTGGAAAATATGCATCACACACAATGGAGGCCTCTCCAACTCTAAAA | |||||||||
gi|55411091|gb|CV723467.1|CV723467 root--03-K15.g1 Rice root lambda phage cDNA library (root) Oryza sativa Japonica Group cDNA c TGCAGTTGCTGCCTCA-AGCTT EST sequence (targeted fragment marked with yellow): GCACGAGGTTTTTTTTTTTTTTTTTTTTTTGACAATGCAAGATGAATAATAAAATATAATCAGCTGCTTGTTATGCAAAAATCACAACGGATATTGCATACTACAAATACATCTCATAGTCCGCATATTGTCATTACAGCCAATAGTACAAAATAAGATTTTACAGGTTGGAAGTGTTCTTGTCTAGTTCTGATCTTGTGGAATAACTGCTCTTTTCACTGTCTCAATAGCTGGATCTTGTGGAATAACTGCTCTTTTCACTGTCTCAATAGCTGAATTCACAACTCGAACAGACAAGTTTCACATGAAATCAACATTTCATCGAACTTTTAGAATTTATATTTATTAAAAACACAGGTTGATCAAAATAGTGAGCTTGGGTATGCATTCAACGAAGGATTTAACAGCACTAGCTCTCAAGCCTGGCAGGGCGAAAGCTATTAGGCAGTAACTGCAGATGCTATGAGAAATTTTAG | |||||||||
gi|29685906|gb|CB682181.1|CB682181 OSJNEf09D09.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf09D09 5', mRNA sequence TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAAGGAGGATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGTAATCATCTAATGATTCTGCAATGGAAATTGATCATACATTAATATAAAATTCATCAAGAAAGTAGTTTATCAACAATTTAAATGCCACATGGAATTGTATAAGAACCACCAAAAGATGCTTAAATACTTGAAGGAAAACTTTAGGAATATAATCAGAATATTCACTGTCAGATTTATCAAGAAAGTAGTTTATCAACAATTTAAATGTCACATGGAATTGTATAAGAACCACCAAAAGATGCTTAAATACTTGAAGGAAAATTTTAGGAATATAATTAGAATATTCACTGTCAGATTTATTTTAATAGTATTCCT | |||||||||
gi|117219492|gb|CT858661.1|CT858661 CT858661 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): ATCTCTCTCCTCCCTCTAAAACTCTCTCTCTCTCTCTCTCTCTCGCGGGGTATTGCAAGATAGTAGCTAATTAACCAGCCTTTGGCCTTCAGTTTCCCCATCGGTTCATCAGAGCACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAATGTTTATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGGGGGGGGGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCAACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGCCTACGTGGTAGAGACCTACAAGGTTTAGAGAATAGGCTTGAAAAAAGTCTACGTAATAACAAAAATGAAAAAGGGAAGCCTAAATTCCCCAGGAAAACATCGAACTTTCTAAAAGCCCTAATGGCATGTCCCAACAAAAATTGGAACTGGTTAACAAGCTTTCAGGCCTGGGAAAAAGAAGGGGGCCCCAAAAACCAATGAAAGTTCCCACCCTTCCATACGGCTTTTCGTATCCAAAAAAAAAGGGTAATGAGGCCCCCCAAAGCTGGGAATTGGAGCCAAACCCCACGCAAAAGAGAAAAGGGGGAGGGGGGAGTAAAAAACACCTTGGCCCCCAAAAAGGGGGCGAAAAAATTTTATTTTGCCCTTTAAAAAATTTTGGGGCGGAAAAAAACGGGGAGAAAAAAAAAAGTGGTTAATTATTTTCTAAAAAAAGACCAACCAAAGACGCCTCTTTTTGAAAGAAGATGAGAGTGATATTATTTTTGTGTGGTAGAATGAGGTGGGAAAAAAGAAAAAAAAAAAACAAAAAGAGGAGGAAAACAAAAAACAAAAAAAAAAAAAAAGGAGGGGGAGAAACAAATAGAAAAAATTATTCTGTTTGTGTGTTTCGATGGGGAAAGAAGAAGC | |||||||||
gi|88200584|gb|CI200434.1|CI200434 CI200434 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): ATTTTTTGGCGGTAAATGGTTACCTGCTGTGCTAATCAGCACACTACTTACAACACCTGAGTCAAATGCTGCTGGCTCAACTTTGAAATCTGCAAACCCCTTGCTGCGCTGATCATCAGCATGATGCAGCAGCTGCAAGGGTAGTGCAACGAAGTTGGCTTAGAACCAGCAGCACCCTTTCGTTCCTTCACACAGGACTGCATATGCGTCCATGGATGCTTGTTGCACTAGCATAATGCAACCCAAGCATGCTTCTTTCACACATGCCCAGGCTGCTATTGCCATCCCCGGCAGCAGCCAGCACCTGTGTTTGAAGCTGCACACAATTTCACAAAGCTGAAACTCGCTCAGCCCCTGCAACTGCTTGCTGTACACAGTGCTGCAAAGGGCATGCGCACATGCCGCTGAATACTTTTACAGCTGTGCACGGCTGCTACGCAGCCTTGGGCACAATAGCTGGCATCACCAGCC | |||||||||
gi|86545894|gb|CI186100.1|CI186100 CI186100 Oryza sativa (japonica cultivar-group) root of seedlings Oryza sativa Japonica Group TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TTGACCACCAACAGCAACGAGCAACGTGCAGGGGCTGTATATTAGGAGGGTGCCAGTAACCCGGTTAAGAAAATTATTTTAGCTATATCTTATCTATTCTTATCATGTATGTACCCTCTCAATATAAACTTAGACATCCGCATCAGCTTAAATTCGATCTAAACTAAAGTAAATTAAGCAAGTGGTACCATCCTCCATTTCGTTTTAGCTCCGCACCTGGCAACATGACCAAGCACACCGTAGGCAGAGGCAGCCGAGCAAGCCATGTGTCAGGGACTCAGGGTAGAGAGGAATGTTGCCGGAAGCAACACACCCAGGCCAGAGGCAGCAACAGCATGTGAGCCCTTTGAAACTGCGATACGTTGGTTGTTGCAAACGTTCTCAGGAGAGTTGTTGCTTCACGGCGGCGCCAATTCGGTTCGTTTTTCGTTAGTTGTTTAGGCTCCCAATGGGACGGGACGGTTTGTAACTTGCTTTAATTTTATCTTTACACATTAGTTAGTAGCTCATGTACAAAGTTGGAAAAGAAGAAGAAGAAACGGAGGAGGAAATTCTGAAGTTGCCGAGGG | |||||||||
gi|88394656|gb|CI622530.1|CI622530 CI622530 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GAGGAAGACAGAAGGGAGTGAACTGAGGAGAGGAAGAGCAAGAGAAGAGAGGAGGCAGTGCATGCAGTGGAGAGAAGGAAAAAAAGACACGTTGTTACGAACGAACAAATAAATGCAGTAGTACGAAGAACTTTGAAATTGGGACTTTTATATGAGCAAATTGGTTGAAAAGAAGAAGGCAAGACAAGTGAACTAAAGTTTGAGGCAGCAATTGTTATACGAGCAAGCTGGTTAAAAAGGAGTAGGCGGTATCTAATAAACGCAGGAATGTCGGCATTTAGAGTGTATTTCAGTGAAGGTGAAATTATGGAAAATGAAAGTGGTGTCAATCTGAGCAACTTTAGGCAATGCACACTATACCATCCAAATCCTGACACCCTTACCATGCCCGAAGTTTGGT | |||||||||
gi|86596854|gb|CI270650.1|CI270650 CI270650 Oryza sativa (japonica cultivar-group) supermix Oryza sativa Japonica Group cDNA clo TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TGGTCGTTACCCGTTAAATAACAGGCGCCAAAATGCCAAAACATTGTACTGCTAACACATAGAGCCGTCTCAAGAGTAGTAAGCGTTAGGAGAGCTCTTGGTTCATTTGCTTGTGATGATGCACTAACCATATTACTCCTACCCAGTTAACAGGACATGTACTGGAGTACCTCGCAAAGGAAAACACATGCGGAATATATGTTTTATTATAAAGGCTAATGACACTAGTTGGAAGAGCCACAGCCACCGGCGGCGGGCTTGTCGTCGTCTCCATGTCCATGTCCATTAGCGGGAGGTTGGCGGTGCTGGTTGGAGAGGAGCTGGGCCTTGAGCTCGGAGAGAAGCCTCTGCCTCTCCTTGTGTAGCAGCTCTGCCGCTTTCTTCAGCCTCTGGTTCTGCTCCATGATGTAGCAGTTCTGCAGCACAAGCTCCGAGTTCACCTTCTCCATCTCCTCCCTCCTCACTCGATCTTAATCAAGTCAAGAAACCACCTCCTTCCTCCTTGCGAGGCTGCGATGTGAGCGGAATGGATGCAGCTCTAGCTCCAGCTCCTGCTAGTGAAGAACTGAAGATTGAAGCAGCAACAGCACAAGGTAAGGTATTTATAGAAGCAAAAGGAAGGAGCAGCAGTGCAGAATTGACATAGGTAACGTGAGCAGCTCGAATGGTCATCATTTCACTTGATCCAGCCCTCGGAGCGAAGCTTATTATGCAAGGCAGAGGCAGTGCAAGAGCATCATGAGA | |||||||||
gi|88850845|gb|CI096235.1|CI096235 CI096235 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage Oryza sativa Jap TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTAACATGCCCGATCAGGGAAGCACTTGTATCATTTCAAATCCAAACAATAAACTCAGTTAAAAACAAGTCGATGAACACACGTTACAGAACCGTTTCAACACAATGGGCATGGTCTCCTGAAAGGTCGACTGTGCAGCACACTGCCATTTTATGCAATGAGAAAAGGGAGTACAGTCAGCATGAAAGCCTCGTAAGTAAAAGTCGCAGAGCCCGAGAAGGCTGTGTCTTTTTCCTTGAACTTCTCAGTCAGACCCTTAACTGTGAGGCAGCATCTGCAAAGGCAAACAAAATAGTGTTAGGACTGTTATATAGGCCGAATTGGAATGATAGAAGATATCAAGATTTTAAACTATATCCAATATTTAACTTTGAGGTTAGGACTTGCTTGGCTGTGGCTTATAATAAGCCATGACACGTGACCAAAGCAACAAAAGACTTTTATATTTCTACACTTAAGTGGTTTAAAATCCAAGGCTGAAAAATAGAACGATGAAAAAACAACTAGATCAATT | |||||||||
gi|87008516|gb|CI314974.1|CI314974 CI314974 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCATCAAACAGCAATATATTGACTTCTAATGTACCAGTACTTGTCAAGTTTTGAGCAGCAACTGTAATGCTGTAATCGGATCAAGAAATGTGCAAGCGAACAGCAATATATTGACACTAATGAACGACAAGAACATATCTCATGTTCTCAAGTTCTACATGTCTCTGAAATATAAATCGTTCAAAAAAAATTAAATATACTATAACTACACTTGACCATAAGGAGAGGTGGTTGACAATCCATTCAAGTACCCATCTCCCTAGAAATCAGTTCCGAGGATGAATGCTACAAACCAATTTTGGAAGGCGGCCGGCCATCATCTTTCAACTGGTAAGAAACCTGAAATATAGATCAGGTACATGGAGAGAGATAGAACCGCAGAAATGTGCTGCCAGAATAGAAGTGCGATGCTTCCTTGACCGCATAACCTCTGCGCTCGCATCGCTCAAGCAGGATGGCCCTGGGGTGGAGTACTGTCGCGACAGCCAAAGCGGTAAATGTGGTATT | |||||||||
gi|66913257|gb|CX100105.1|CX100105 RECm0919 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CAGCGGAGGGACGGTCGGAGATTCCGGGTGACCACGCGTCGCTCTCTGTCTCTCTCTCTCGGGGTATTGCAAGATAGTAGCTAATTAACCAGCCTTTGGCCTTCAGTTTCCCCATCGGTTCATCAGAGCACGCCTTCAATTTCCTAATCAATCTCCCATATAATTCCCCTTAGCTTGTATGCCTATCATTAGTACTTCTTGTGTTGTGTTGTCTTCTTGCCTTCTTTGAGCTAGAGCTAGCTAGGTTTGTGACCTGCTGTACGTGCGTGTGTTAATTAGATAGATGTCTTAGATCTGGGAGAGAGCGAGGAGATGGGGAGGGGGAAGATAGTGATAAGGAGGATAGACAACTCGACGAGCAGGCAGGTGACGTTCTCGAAGCGTCGGAACGGGCTTCTGAAGAAGGCGAAGGAGCTATCCATCCTCTGCGATGCGGAGGTCGGCCTTGTCGTCTTCTCCAGCACCGGCAGGCTCTATGAGTTCTCCAGCACCAACATGAAAACTGTGATAGACCGGTATACCAACGCAAAGGAGGAGCTACTTGGCGGGAATGCACTTCAGAAATCAAGATTTGGCAGAGGGATGCCGCCAGCTTGAGGCAGCAACTGCACACTTGCAAGAAAGCCAAAGGCACTGATGGGTGAGGAGCTTCTGGCCTAGTGTTAGAGACTTACAGGCTTCCGGATCGGGTGAAATCAGCTACGTATATCCAATGGAACGGCCCCCTTTGCACAGGAACCCGGGCTCCTGTGAGGGGACCTATTCCAGGAAAATGAATCTTAAGCTAGTCGTTGACAAAGGGGGGTTACGCTGGCGGAACAAGGGCGGTTGTAGATGACCCAGGTGGGATCAGGCTGTCTCTCTTAGACACAGAGNGAGGATATCACTAAGACACCGCGCCATTCGTGCGCAGTGATAGTACCTCAGCTCAGGCGACTAGGCGTGCTGGCGTCTAATCAGAGAGGTAGCAGCAGATGACTGGTGAGTAGAGG | |||||||||
gi|58608645|gb|CK036678.1|CK036678 42026rsiceg_15246.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa c TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CCGGGCTGCAGGAATCGGCACGAGGCAGCAACTGCACCCGGAAATATCGGAGCGATCACGCGAGTGCTCCTCTCCATCCGCAAGGGGGGAAACCAGTGCGGTAAGCGACTTTCCCCTCCTCCCGTTCCCCTTTCTTCTCTACAGTAGCTTCCCAAAATCCCTCCCTTCCGGCCCCTCTTCCCCTTCGATTCCGGCGGCTTGCTGCCGGCGAGGGTTGGAGGAAGGGTCCGGCCACCTTCCCCTAGTAGTATTGTGTCAGGTTTGTCCTGTAGTTAGGGTCTGTCCCTTGTCTTCTTTGCCGGCGAGGTCCTATGGTTGCCGGAGTTGTCGATGGCGTTGGCGTTGGCGTTGGTCGATGGCGAGCTGTTGCTGTCTGCTGGCAGCGGCGTGGTCTCGTCGTCGTTGTTGTTGGTTCTTTGCAGCTAGTGGAGGAGGAGGATGTGCTGGATCTGGTGCTTGAGGTGGTGATGTGGTGTCTGCTCTTGCCGCCGCCGTGGTCCTTGCTATTGTGCATGGAGGTGCTGTTGAAGGCCTACGAGAAGGTGTCTTGCTCGTGGTCTCTTTCCCTCTGCACCGGTTGTGATCTGGGTTGGTGGTGGTGCTTTGTGCTTCTTGCCGGTGTCCGGAATGATGGCGTCGTCGCCGGAGTCGACGATGT | |||||||||
gi|29672219|gb|CB668494.1|CB668494 OSJNEd16F24.r OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd16F24 3', mRNA sequence TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): AACGCGAACAAGATCTCTCTCGTTCTTACCCTGTCCCTCTGCAAGCGGGAGATCCAGGTGAGGATGGTAAATAAGGAGCTGTATGAATGCCTGAAGCAGCAGCTGCAGCCTGAAATGCAGGAGCATCTGGTTTTGTCATGCAGTTACAGCAGCAAGGTGTGGCTCGTGGGCGACGGGGTGACGGATGAGGAGCAGATGAAAGCCCAGAAAGGATCCCATTTCGTGCCGTACTCGCAGTTCCCTCCCAACAAGGCCCGCAACGACTGCGTCTACCACTGCACCCCGGCTCTACTCGTCCCTGAATCCTTCGAAAACCTTCACGTTTGCGAGAATTGGTTGCCGAGGAGGGTGATGAGCGCGTGGCGGGCGGCGGGGATCGTTCACGCGCTGGAGAAGTGGGACGGGCACGAGTGCGGCGGCAGGGTCACCGGCGTGCAGAAGGCGTGGAGCGCGGCGCTGGCACGGGGATTCCGGCCATACGACGACCACCACCACCCCGGCATCACCCATGATGGCCGTGGCGGGCTGTGACCGGCCGGTGGCCGGATCGAAGCAACCTGGCCTGATTGTGTGATCTTGTGTGTGCTTCTTCGCTCGGTTGATATATAGGAGTATCTCCGTGTGTGTTATGATGGGGCCAGATTAATATCCAGCTATAAAATCCCAAGCTGTATTGTTAATTCTCTGCCGGTGTCATAATCTATTGTTTGAGCATAACTGAAATTTGAGCATGATTAATTTGGAGATAAAAAAATTAAAAG | |||||||||
gi|29664755|gb|CB661030.1|CB661030 OSJNEd03F24.f OSJNEd Oryza sativa Japonica Group cDNA clone OSJNEd03F24 5', mRNA sequence TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCCAGCTCAGATATCTCCCCGTCTCTACTCCGCCGGGAGCAACATGTGTCGCGGCTTTTGCTTCGCTTCCACGGCCACATGCCGCGCCACGGGCACCCGCGCGCGCGCGCGCCCGCGCGCCGTCCTCACGCCGCGTCCGCCGCCCAGATCCGGCGCACGCTCCTCCCCCTTTTGAGCCGCCATCGCCGGCACCGCCGCGCGCGACGGCGCGGCGCAGCCGCACCGATCTCGTGAATTCCCCTCCCTGACCACTCTCCCGGCCCCGGCCCCAGCCACCACCTAAATCGCAATGCCTTTCTCCGCTAGCTCCCGCCGTCCCCTCCCCTCAACGGTGCCGGTGCGGCGCGCGCGTGGTTTCTCAGATTCATGCAAGGGGATGGTGACAAGCTTGTGGCAGCAACTGCACATCTTGCAAGAAAATCTTTAGGGTTTTTCAGACCATACCGATGATTTTCTTGCAAGTTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAAAACTATCAAGTGAGAAAGCAGGGTAGAGTTATTCAATTACAGGCACACAAGACAAAATTAAAGTAATAAACATGTCTGACCAACAAACACAATGATTAATAACAAAACTCTTGTGGCATGAGATAATATTGAAGCATGATGCTTACAACAGTTATAATATGAAAACTAGATGGAGGCAGGTACATGTTTTGACAAGGTTGACATTATCTTAAT | |||||||||
gi|40491272|gb|BX901431.1|BX901431 BX901431 Oryza sativa library (Han B) Oryza sativa cDNA clone p650f07p3, mRNA sequence TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCACAAATCATCCCAATTGGAATTACAAATCCAAATCACCACAGTTCATAATCCATGTCCGTGCAGCATCTGCACATACTGACCTCACTTTATTTGTACATTGTTCAACATATTACACATTTCACATATCATCTTCATCTTGGTAATATCTGTTAAACTTAATCAGGAATTCACAACACGTCCACGTTGCATGTACCGGTCTTCTTGTCCCAGTCCCTGTTCCAGCACATGATGCCTCCGTCGTTGGGGCAGCTTGTTGCAGCAACTGCAGCACATCGCAAGTAACAGATCCTTGTGCGCACATGTAGGCGTCCCTGTCCGCCTCCGGCGAAGCCACAATGCTGACGTAAATCCGGCTGTCCGGGTACGCCGCCGCCCACTTCTCCAGCGACTCTCCCCGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTACGTCCAAAATCGGAAACAAAGGCAAACAAGGAGCAACACGGTACCCGTGCAAAAAGTGGGCCTACCAAACATCTCAAAAAACACACCAAAG | |||||||||
gi|88276677|gb|CI397479.1|CI397479 CI397479 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CAGGAAAGAATACATTGCCTTCTAAGCGGTTTGAGTGATAAAAAATTGTTAAAAACATAAAACACACTGAATTAAATGTCAACGGTTCCATGGTTTCAACTATCCCAGAAAAGCAGGGTTGGCATTTCGAGATCTTCCGTCTCTTAAAACTGAATGGATGCCCATGCTTCAAAATGAAACCCTGAGGCAGCAACTGAAAGCATGAAAAGAAATCACCAATCTAAAAGTCGTCATCGTCCTCCTCAGCCATGTGTTTTGCTAGTTCTTCCTCCTGTTGGAGCCTCTCGCGCCTCTTCTCAGCACTCTCCTTTTCCTGTGAGAATTCGGAGGGAACCTCAGTGCTTTGACCGCTTCGTTGTGCATGTTCAAGCAAAATGCAATCCTTGAATTGAAAGCAATCTGTGGCTCATTCGTTGA | |||||||||
gi|86875988|gb|CI325538.1|CI325538 CI325538 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): AACATAAGCATCAATACCTTATAAATTCATCAAATAGGTAGCCACTACATTGGGAAAACAAGTAGGGGAAGGCAGGGGATCAAGCTCAGGAATTACAACAACTGAAGATTTTTTATGTTTTTAGTAGGTGATACAGACCGGGAAAGCCAGAATTGCATATCTTTAGGATAAGCTTGTTGCAGAAACTGCAACTCAATCATGTCCTTGGCTTACTCGGCCGTCCAGCTCTGCTCCACAACTCTCGCGGAATTTGCGGTTG | |||||||||
gi|89170266|gb|CI039543.1|CI039543 CI039543 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTAAGAGGCTTCTGCAACCCTAGCAGCAACAGCAACTTCTGGGCTAGGGAGTATAATTCTTTACATAAGCATCAATACCTTATAAATTCATCAAATAGGTAGCCACTACATNGGGAAAACAAGTAGGGGAAGGCAGGGGATCAAGCTCAGGAATTACAACAACTGAAGATTTTTTATGTTTTTAGTAGGTGATACAGACCGGGAAAGCCAGAATTGCATATCTTTAGGAGAAGCTTGTTGCAGAAACTGCAACTCAATCATGTCCTTGGCTTAGTCGGCCGTCCAGCTCTGCTCCACAATCTCGCGGACTTTGCGGTTGTACTCGCGCTTGTTCTCGCTGAACAGTCTGGCTGCTTCGGAGTTCGCAGGGGAGTTCGGGTTTGGATCACAGAGCAGGGACTGGATAGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCT | |||||||||
gi|117223724|gb|CT847254.1|CT847254 CT847254 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): AATAAAGTTTGAGTTGCGGATCTGAATTTGAACCCTAATAGGAAACCAAACTATACATAGGAATCATGAAGTTGATGAGATACGAGGAGGGGTCAGCTCAGACATTACGGAGATGGGTGATGAGAGCGAATAAAGACTGACATTGGCATGGACATTGTTACCTTTATGATCATCTCTGCCGAACCACCTGTACTCGGAACCTCTCGTGTTAGCGGGGACTTATTTGTGATTGGATGGATTGGCAAATGTATCTGCAGTGGATGTCATTAGTTGTAGGCGCTGTTCCAGCGTTTGGATCTTCCTCTGTGATTGATTAGAGGACATGCCATTCTGATGAGATGTTGCACGCAGAATTTTTGTAACCATGAGTAGTGCAAAGGATACAATGCGTGCGTGGCATCCGGTTGGGACAACAGAGGATAGAACTGTTGTGAGTGTACTCTTTCGAGGTGTACACTATCAGATTTTGACGAGACTTCAAATGCTATAGCTTGGGAGACTGTCATTGCGGGCACATCAGGGATTTTATCTAAATTACGGTATGGTCTCTATCTTGTCTTACCGTTTTGTTATGTCAACATACTATATGATAAAAGAGTTATGGTGGAAGAGTCAGTGCTTGAGACAGCGACTGCAGCGATCAACAAGAGCTGGCACACAATACTCTGTCTGTATTGTGAGCCGACTGTGATTGCGCTGGCGGCTGTTGAGTATGCTCATGAGCTGAATAATTGTGGAGTGAAGAATGAATCGAGAGCGACTATTGCGTGGAGAAATTGTATTTGAGGTGAAGAAGTAGATGAATAGGAAATTAATGAAGTGACAAATGATCTAGATAGCATTAGATACATTTTCAATAGGTAACACCTTTAAGAATATTATATGTAATTTTCTGCCATATGAATGAAAAATTCTAGCTCTTCTTTAAAAAGAAAGGACGCTAAATTTAATTTTGGCTTGGAAAGGCTAATACCCCTTCCGTCTGAATGGAAATTAATATAATTTAATTTAAACAAAAAAAAAAAAAAAACTTGGGGGGGGGGCCCGGGTCCCCATTTTGCCCTATTGGGGGGGGTTTTTACCCCCCGGCTCTTGGGCGCGGGGGTTTTCCAAACGGGGGGGGGTTGGGGAAAAACCCCGTGGGGGTTTCCCCACCTTTTTAATAGTTTTTGTGGACAAAAAAACCCCCCCCTTTTGCTCCCCAGTGGGGGGGGTTTTTGGGGGGGAAGAAGAGGGGAGCCCCCACCCACCCCTCCCCCCCCTCTCCTCCCCACCCCTTTGTGCCTTTTCCTCCTTTCGTAGTGAAAGGGGGAAGGGATGGGGGAGGGAAGCGCGGCCGCCGCCCTCGTGGGTGCTCCGTTG | |||||||||
gi|89168546|gb|CI038900.1|CI038900 CI038900 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GACTGGAAAGCCATACTAATGTTGTTGCCACTTTCTACCTATGATAAATAGAAATTCATGAGCTGAAGAGAAGAACATAAGGCTGCAAGAAAAACCGTCCAGCTATACTAATTTAATGTTTTCATTTTACTAGCTTTGGCAACAGGAGGCAGCAAGCTTGAGGCAGCAACTGCATAACTTGCAAGAATATCATCGGTATGATCTT | |||||||||
gi|86424256|gb|CI063017.1|CI063017 CI063017 Oryza sativa (japonica cultivar-group) UVC irradiated shoot Oryza sativa Japonica Gr TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): ACATAAGCATCATCCTTATAAATTCATCAAATAGGTAGCCACTACATTGGGAAAACAAGTAGGGGAAGGCAGGGGATCAAGCTCAGGAATTACAACAACTGAAGATTTTTTATGTTTTTAGTAGGTGATACAGACCGGGAAAGCCAGAATTGCATATCTTTAGCGAGAAGCTTGTTGCAGAAACTGCAACTCAATCATGTCCTTGGCTTAGTCGGCCGTCCAGCTCTGCTCCACAATCTCGCGGACTTTGCGCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTTTTAGAGCAGAAGTAACACTTCCGTACAGGCCTAGAAGTAAAGGCAACATCCACTGAGGAGCAGTTCTTTGATTTGCACCACCACCGGATCCGGGACCTGAAATAAAAGACAAAAAGACTAAACTTACCAGTTAACTTTCTGGTTTTTCAGAGCTTGGATCTGTAACGGCGCAGAACAGAAAACGAAACAAAGACGTAGAGTTGAGCAAGCAGGGTCAGGCAAAGCGTGGAGAGCCGGCTGAGTC | |||||||||
gi|88259775|gb|CI364068.1|CI364068 CI364068 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): AGAGCGAACTGAACTTGTCATGTTCAAAACATTGTGCCCCAAGGATTGAACGGTACAGTATTTCAGGAAAGAATACATTGCCTTCTAAGCGGTTTGAGTGATAAAAAAATTGTTAAAAACATAAAACACACTGAATTAAATGTCAATGGTTCCATGGTTTCAACTATCCCAGAAAAGCAGGGTTGGCATTTGGAGATCTTCCGTCTCTTAAAACTGAATGGATGCCCATGCTTCAAAATGAAACCTTGAGGCAGCAACTGAAAGCATGAAAAGAAATCACCAATCTAAAAGTCGTCATCGTCCTCCTCAGCCATGTGTTTTTGCTAGTTCTTCCTCCTGTTGGAGCCTCTCGCGCCTCTTCTCAGCCACTCTCCTTTTCCTTGTGAGAATTCGGAGGGAACCTCAGTGCTTTGACCGGTTCGTTGTGCATGTTC | |||||||||
gi|88340398|gb|CI659604.1|CI659604 CI659604 Oryza sativa (japonica cultivar-group) callus UVB iradiated callus, 24hr after treat TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): ACTGCGCCAATTTTCCTGCCTTTTCTACCCCCCACTTGGAATTCTGGAAACATCGATTCGATCCTTCTAGACCCTTCTCCGCCCCCGTTTTAAAGTGCGCCGGCCTCCCACCCGTCGCTTCATCGCTCGCGGTCGCAGTCGCAGTCGCCCACACCCTTGCCGCACCATGGCTGGAACCCGCGGCGGATTCGAGTTATTGCACATGGTGGCACCAAGCATGAGGCAACAACTGCATTACTTGCAAGAAAGGCACAAAATCATTAGATGATTACTTGTGGCTTTCTTGCAAGTTGTGCAGTTGCTGCCTCAAGCTTGCTGCCTCCCTCTGCCAAATCTATCAGCAAAAAAAGAAAATCATGTCAGTTTCCTTGAACTATATACATATGATTAATCTAGAAACGCAGTATGT | |||||||||
gi|55431731|gb|CV728881.1|CV728881 FLO--01-G24.g1 Rice flower lambda phage cDNA library (FLO) Oryza sativa Japonica Group cDNA c TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CTGGACTGAAGGAGTAGAAGTTTCCATTCCTCCTCGTCATCACCACCTCGCGGCGGCGGCGGCGGCGATTGGCTTGTGCTCTCTCCGGCGACCGCGCCTCCTTCCCTCCACGGTGACCTCCTTCCGGCGAAGCACTGCCTCTCTCGTAGTCTCAGTTCTCCTCCTACTTTTAATTGGACTTGTGCTGCGAGGGGAGATCTACCAATCTGGGCGTGGATTGGTCTGTTTCTTCTGGTGACAAACCTTAAGCTTGCTCGGATTTGTTCGGAACAATACCATGGAGGTGAGACCAATGGTTGCTTTGCGTGCTGCCCTAGTTGGTGGGGTAGCAGCATTTGCGAAGATTGGTGCGGCGATNAAAGCTGCAGGAGGTGCGAAGGTTGGTGCAGCGGCTGCAGCAATGACAGCTGCAGCAACAGCTGCTGTATCTAGCAAAGACACAAACAAAGATAATCCGAAGACTGAAACAAAATGATATGTGCCTTACTTAGTGGAGAAACCCTGTATG | |||||||||
gi|88369807|gb|CI680481.1|CI680481 CI680481 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGGTTCCATTCCTCCTCGTCATCTCCAGCTCGCGGCGGCGGCGGCGGCGATTGGCTTGTGCTCTCTCCGGCGACCGCGCCTCCTTCCCTCCACGGTGACCTCCTTCCGGCGAAGCACTGCCTCTCTCGTAGTCTCAGTTCTCCTCCTACGTTCTACTGGACTTGTGCTGCGAGGGGAGATCTACCAATCTGGGCGTGGATTGGTCTGTTTCTTCTGGTGACAAACCTTAAGCTTGCTCGGATTTGTTCGGAACAATACCATGGAGGTGAGACCAATGGTTGCTTTGCGTGCTGCCCTAGTTGGTGGGGTAGCAGCATTTGCGAAGATTGGTGCGGCGATGAAAGCTGCAGGAGGTGCGAAGGTTGGTGCAGCGGCTGCAGCAATGACAGCTGCAG | |||||||||
gi|38479812|gb|CF963901.1|CF963901 13295rsiced_3462.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indic TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TCTCCAGCTCGCGGGGCGGCGGCGGCGATTGGCTTGTGCTCTCTCCGGCTACCGCGCCTCCTTCCCTCCACGGTGACCTCCTTCCGGCGAAGCACTGCCTCTCTCGTAGTCTCAGTTCTCCTCCTACGTCCTACTGGACTTGTGCTGCGAGGGGAGATCTACCAATCTGGGCGTGGATTGGTCTGTTTCTTCTGGTGACAAACCTTAAGCTTGCTCGGATTGGTTCGGAACAATACCATGGAGGTGAGACCAATGGTTGCTTTGCGTGCTGCCCTAGTTGGTGGGGTAGCAGCATTTGCGAAGATTGGTGCGGCGATGAAAGCTGCAGGAGGTGCGAAGGTTGGTGCAGCGGCTGCAGCAATGACAG | |||||||||
gi|86850407|gb|CI307636.1|CI307636 CI307636 Oryza sativa (japonica cultivar-group) UVC irradiated shoot Oryza sativa Japonica Gr TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGTTCCATTCCTCCTCGTCATCTCCAGCTCGCGGCGGCGGCGGCGGCGATTGGCTTGTGCTCTCTCCGGCGACCGCGCCTCCTTCCCTCCACGGTGACCTCCTTCCGGCGAAGCACTGCCTCTCTCGTAGTCTCAGTTCTCCTCCTACGTTCTACTGGACTTGTGCTGCGAGGGGAGATCTACCAATCTGGGCGTGGATTGGTCTGTTTCTTCTGGTGACAAACCTTAAGCTTGCTCGGATTTGTTCGGAACAATACCATGGAGGTGAGACCAATGGTTGCTTTGCGTGCTGCCCTAGTTAGTGGGGTAGCAGCATTTGCGAAGATTGGTGCGGCGATAAAAGCTGCAGGAGGTGCGAAGGTTGGTGCAGCGGCTGCAGCAATGACAGCT | |||||||||
gi|117248323|gb|CT856701.1|CT856701 CT856701 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): ATGAAATCATGTTGTTGCTTCAAGTAGTCAACCAATTTCTTTTGTGGGAAACCAACTTCCTGACCATACATCACAAGCAAGAGGAGTTCCACAGACCACAAATGGCCTGATGGGGGTTTGACGCAGCAATTGCAGTCCAGACCATACTGGCTACTATGGTCTGACATCATTGTTGGGGATTTCAACGGTTGATGAGTTTGTAAAATCCAGCAGACAATTGGGATTGACCAGTGGGTTCTTTGTAGCGTTAGTCAAATGCAGGAGTATGGCTAGGCTATGTACAGTATTTATCTGGTACCATGTTGATGCAAGCAAGTGTATTCTGTAGATCCTGTCTTTCTCAAATTATACTTTGGTAGCTGTTCTGCTAAATATAACCAATCCTGATGTCTCTGTGCTTTAGCATTTTGCCATGGCCTTTTATGATTGTTCAATTATCTGGATTAGAAAAAAGAGCAGTAGTGTTTTTTTTTATGACCGTTGCAATTGAAAGGGACAAGGGATGATAAATTTCTCATGACAACTTATCCTTCCGTGTTCAAATTTATTGATATATCTGCAGGCAGTCACAGCCTCACAAATTACAACAAATACTTTGAATATACGTTACCAGAAAACAAGGGAATAATGAAATATTATGAATACATTTGCATTGGTAGAATTTTTCTTTTAATTTTATATAGCTACTGCAGCTGTACTTGGACCCCCAGATCATATGTGGCCCCTGCCGTCCAGTTCTGGGGTACTATGTTCGTCGGAACTAGCCATGTGTCACCACCACGGGGAAGCTCCGCTACTAAATACCATCCTTATAGACAGAGGCCCACTTGGTGGAGAAGACAGCAGCCCACACTGCACCATGAGTCCCGGGTAAAAATTTGGCTTGCAAAATTAACAGTTGGATTAAAGTAATGAACAAAGTTGGGGTAATTTGCTGGTTTTCACACAAAGGAAGTTTGGATTTTGGGATACCCTTAAAAAAGAAAAAAAAAGAAAAAAAAGTTTTAATTGGGAAAATGCCCACCAAAACAATTTTGGCCCCTTGGGGGGGTTTTGGCCCCGGGGGAAAACCCCGTCCAAAAACCCCTTTAAAAAAAAAGCGGGGGCGTTGCCCAAAAAAGGGAAGGAGGGGAAAAAAAAACCACCAAAAATTTTTTTTTTTTTTTTGGTTTTTTTCTTTTTCTCCTCAAAAAAGGGGTTTTTTTTTTTTTTTTTTTTTTATTTAGGTGGTGTTGAGTATATTTTTTTTTCCCGTCGCGGTGTTGTGTTGTTTTGTTTTTTCTCTTTTTCTCTTCTTTTATATGTTGTTGGTGGTTGGTTTGGCGTGGTGGTTGGAGAAGGGAGAGCGAATAAAT | |||||||||
gi|88357034|gb|CI620922.1|CI620922 CI620922 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGCACCAACACAGCATTCTTCCTGCTCCAGTTCTAGTCTTCTAGGGTTAGAAGTGATGAGAGGTCAAGATAAGCTGTGGGTAAACAAGCTCAATCACTATGGTGTGGGTGTAGAGATCTGATCTATATATCCAGGTTTTGTAACCAGGGGCAATAAGCTAGAGGCAGCAACTGCATAACTTGCGAGAAACTTGTAAGATTTCTTTACAACCTATGGAAAAGATAGGTTTACTTGTCTTAATTTTTTGCTGTTCTTGTTAACTAGGAAACCAGAAGAATTATTAACAAGAGAGAATTTATAACAAACAAATTTGATGCCAATTCTATCCTTGACTCTTTTTTTTTCTATTTTTTTTATCTCTTGAGTCATCTAGTCATTTCACTGTT | |||||||||
gi|41884381|gb|BX929212.1|BX929212 BX929212 Oryza sativa library (Han B) Oryza sativa cDNA clone y787h05p5, mRNA sequence TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): CCATGTGTGGTACCCGGGAATCGGCCATTATGGCCGGGAATGCACTTCAGAAATTAAGATTTGGCAGAGGGAGGCAGCAAGCTTGAGGCAGCAACTGCACAACTTGCAAGAAAGCCACAAGCAACTGATGGGTGAGGAGCTTTCTGGCCTAGGTGTTAGAGACCTACAAGGTTTAGAGAATAGGCTTGAAATAAGTCTACGTAATATCAGAATGAGAAAGGACAATCTTTTGAAAAGTGAAATCGAGGAGTTACATGTGAAGGGAAGCCTAATTCACCAGGAAAACATCGAACTTTCTAGAAGCCTAAATGTCATGTCGCAACAAAAATTGGAGCTGTATAACAAGCTTCAGGCCTGTGAACAGAGAGGTGCCACAGATGCAAATGAAAGTTCCANGCACTCCCCATACAGCTTTCAGTATCCATTACAAAATGCTAACTATTGCCTCCCTAGTCTCTGAATTGGAGCCCAATCACAGCCAAAGCAGAAGGGGCAGTGCAAGCACAAACACGCTGTCTCCAGACACTGGCGA | |||||||||
gi|87025742|gb|CI250486.1|CI250486 CI250486 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTGCCATTTACGAACAAATGAGAGCGAACTGAACTTGTCATGTTCAAAACATTGTGCCCCAAGGATTGAACGGTACAGTATTTCAGGAAAGAATACATTGCCTTCTAAGCGGTTTGAGTGATAAAAAAATTGTTAAAAACATAAAACACACTGAATTAAATGTCAACGGTTCCATGGTTTCAACTATCCCAGAAAAGCAGGGTTGGCATTTCGAGATCTTCCGTCTCTTAAAACTGAATGGGTGCCCATGCTTCAAAATGAAACCCTTGAGGCAGCAACTGAAAGCATGAAAAGAAATCACCAATCTAAAAGTCGTCATCGTCCTCCTCAGCCATGTGTTTTGCTAGTTCTTCCTCCTGTTGGAGCCTCTCGCGCCTCTTCTCAGCACTCTCCTTTTCCTTGTGAGAATTCGGAGGGAACCTCAGTGCTTTGACCGCTTCGTTGTGCATGTTCAAGCAAAATGCAATCCTTGAATT | |||||||||
gi|88263682|gb|CI366583.1|CI366583 CI366583 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GATAAAAAAATTGTTAAAAACATAAAACACACTGAATTAAATGTCAACGGTTCCATGGTTTCAACTATCCCAGAAAAGCAGGGTTGGCATTTCGAGATCTTCCGTCTCTTAAAACTGAATGGATGCCCATGCTTCAAAATGAAACCCTTGAGGCAGCAACTGAAAGCATGAAAAGAAATCAACAATCTAAAAGTCGTCATCGTCCTCCTCAGCCATGTGTTTTGCTAGTTCTTCCTCCTGTTGGAGCCTCTCGCGCCTCTTCTCAGCACTCTCCTTTTCCTTGTGAGAATTCGGAGGGAACCTCAGTGCTTTGACCGCTTCGTTGTGCATGTTCAAGCAAAATGCAATCCTTGAATTGAAAGAAATCTGTGGCTCATTCGTTGAGTAGACATCACCAGTCTTTTTTGACAACATCCAACATTGGCATGATCAATGGTGGCATCAATTGCCCATCCCTGATTGCTTTGGTACAATACTTTCAGCATC | |||||||||
gi|29689637|gb|CB685912.1|CB685912 OSJNEf16M01.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf16M01 3', mRNA sequence TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCGGTGGCAAAGCTTGACGCGACAGCGTGCCGGTGGTCATCGCCGGCGGCGGTGGCAGCNGCCGCCGCCGCCGGAGGAGGCGACCTGTGGGAAGCCGGAGGCAGCAACGGCATAGCGGGTCGTAGAACCACCCTTTCCTCCCTCCTAAAGTACGGCGGCGGCGCGACGGCCCTCGACGACGACTCCTCCGCGCCGCCGAGCAACCTCGACGCCGGCGAGGTGCTCCCGCTCCGTCGGTCATTCTCGGAATCGGCGTCGCTGCCGCGGCTGTCCACCCAGAGCTGCGCGGTGCTCATCCATTTCGTCTTGTCGCCGTCCTCCGCCTTCGCCTCCGCGTCGTCGCCGTCCTTCCTCCTCTTCCCGGCCTCCTCCTTCATCAGCTCGATCACGTCGGCGAGGAGGGGGGCGCAGAGCGGGAGCTCGCGCCTGAACATCTCGATATGGGGCGCTCCTCCTCGAGGGGGGGCCCGGTACCCAGCT | |||||||||
gi|86484361|gb|CI126994.1|CI126994 CI126994 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTATCAGGGNAAGCACTTGTATCATTTCAAATCCANAACAATAAACTCCAGTTAAAAACAAGTCGATGAACACACGTTACAGAACCGTTTCAACACAATGGGCATGGTCTCCTGAAAGGTCGACTGTGCAGCACACTGGCATTTTATGCAATGAGAAAAGGGAGTACAGTCAGCATGAAAGCCTCGTAAGTAAAAGTCGCAGAGCCCGAGAAGGCAGTGTCTTTCCCCTTGAACTTCTCAGTCAGACCCTTAACTGTGAGGCAGCATCTGCAAAGGCAAACAAAATAGTGTTAGGACTGTAATATAGGCCGAATTGGAATGATAGAAGATATCAAGATTTTAAACTATATCCAATATTAACTTTGAGGTTAGGACTTGCTTGGCTGGGGCTTATAATAAGCCATGACACGTGATCAAAGCAACAAAAGTCTTTTATATTTATACAATTAAGTGGTTTAAAATCCAAGGCTGAAAAATAGAACGATGAGAAAACAA | |||||||||
gi|163926718|gb|EG713734.1|EG713734 Os6CPREST0158 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-A3H07S, mRNA seq TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGCCATTACGGCCGGGGGTTCCATTCCTCCTCGTCATCTCCAGCTCGCGGCGGCGGCGGCGGCGATTGGCTTGTGCTCTCTCCGGCGACCGCGCCTCCTTCCCTCCACGGTGACCTCCTTCCTGCGAAGCACTGCCTCTCTCGTAGTCTCAGTTCTCCTCCTACGTTCTACTGGACTTGTGCTGCGAGGGGAGATCTACCAATCTGGGCGTGGATTGGTCTGTTTCTTCTGGTGACAAACCTTAAGCTTGCTCGGATTTGTTCGGAACAATACCATGGAGGTGAGACCAATGGTTGCTTTGCGTGCTGCCCTAGTTGGTGGGGTAGCAGCATTTGCGAAGATTGGTGCGGCGATGAAAGCTGCAGGAGGTGCGAAGGTTGGTGCAGCGGCTGCAGCAATGACAGCTGCAGCAACAGCTGCTGTATC | |||||||||
gi|117216187|gb|CT861556.1|CT861556 CT861556 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGTCGTCGTCTTCGCGTCGTTCTCTCGGAGCCCCCCCTCGCTTAGATTGGATAGGATCGCGCCAATCGCGGTCTCGTCCTCCATGGCATCTGCCCCCCCCCCCCCTAGATTTCCGTAGGAGGTAGCTATCTAGCTTGCTGCCGCCCGTCGCATGACCACGACCCTCGGATCGTGGTGGCCGTTGGCTCCCCGATTAGCTTCTCCCATTGCCGCTCCTGTAGGCTGTAGCCCCAGCCGATATGCTTGCGTTGATTTTGATTCTGTGCCGCCTAGCGACCCGCCTCTCTTCATCTAGGGTTCAACCTTCGAGCCGGCTTCTCAGTTGCTGCAAGTGGAGGCGGCAAGCTAGAGACAGCAACTGCATATCTTGCAAGAAAATCGGTTTTATGGCCATACCGATGATTTTCTTGCAAGCTGTGCAGTTGTTGTCTCAAGCTTGCTGCCTCCCTTTGCCAGAACTATTGGATATGAAAACAGAGTCAAGAAATGCAGAATCCAGGTTTGCCAAAAGCAGCAATATAAATATGTTGTGTATACCCATAGAAACATGCTGGGTTATCAACTCACTAGTTTTTTTTTTAAAAAAAGGAAACTCAATTACATTAGACAAGAAGACTATTTGAACTGAGGAAGTTATTGTGTATGGTAAAAGAAGTAACAAGAGGCAAACAAAGAAATTTGTTGTAAACAAATAAGGGAAGTAGTATTATCTTTCCAGTTTGAAGACAGTTTTTTTTTTCCAGATAAGACGATGAGCTACCAACTCTATTGAATTTGGTACTCCATTATCAGTCCTCGTTTTGCGGGGTGTTACCCCCTATTGTAAAAAGCTTGTTTGTCTAAGCAAAATGCTTCCCAGTCCCACCAAAGCTAGATTAACTACAAAGTATCTGCCGAGTGCACAAGTCAGGTAAAAAACTTTGTTTGTCTAAGCAAAATGGTTCCCAAGTTCCCCCCAAGTTAATTTAACATCAAAGTTTCTGCCGAAGGGGCCCAATTCAAAAAAAAAAAAATTGTTTTTGTTTAAACAAAAAAGGGTCCCCACAATTCCCCCCCAAGCCTAGAATTAAAATCAACAAAAATTTCTTGCCCAAAGGGGGCCAAAATTCCCGGGGGAAGAGGGTGAAGAAT | |||||||||
gi|88327222|gb|CI652263.1|CI652263 CI652263 Oryza sativa (japonica cultivar-group) germinating seeds Oryza sativa Japonica Group TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GGGTTCCATTCCTCCTCGTCATCTCCAGCTCGCGGCGGCGGCGGCGGCGATTGGCTTGTGCTCTCTCCGGCGACCGCGCCTCCTTCCCTCCACGGTGACCTCCTTCCGGCGAAGCACTGCCTCTCTCGTAGTCTCAGTTCTCCTCCTACGTTCTACTGGACTTGTGCTGCGAGGGGAGATCTACCAATCTGGGCGTGGATTGGTCTGTTTCTTCTGGTGACAAACCTTAAGCTTGCTCGGATTTGTTCGGAACAATACCATGGAGGTGAGACCAATGGTTGCTTTGCGTGCTGCCCTAGTTGGTGGGGTAGCAGCATTTGCGAAGATTGGTGCGGCGATGAAAGCTGCAGGAGGTGCGAAGGTTGGTGCAGCGGCTGCAGCAATGACAGCTGC | |||||||||
gi|88537072|gb|CI464883.1|CI464883 CI464883 Oryza sativa (japonica cultivar-group) 2 weeks after flowering ear Oryza sativa Japo TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): GCATAAGCATCAATACCTTATAAATTCATCAAATAGGTAGCCACTACATTGGGAAAACAAGTAGGGGAAGGCAGGGGATCAAGCTCAGGAATTACAACAACTGAAGATTTTTTATGTTTTTAGTAGGTGATACAGACCGGGAAAGCCAGAATTGCATATCTTTAGGAGAAGCTTGTTGCAGAAACTGCAACTCAATCATGTCCTTGGCTTACTCGGCCGTCCAGCTCTGATCCACAATCTCGCGGACTTTGCGGTTGTACTCGCGCTTGTTCTCGCCTGAACAGTCTGGCTGCTTCGGAGTTTGCAGGGGAGTTTGGGTTTGGATCACAGAGCAGGGACTGGATAGAGGTCAATATCGCAGCAACATCATATATAGGGCTCCATTG | |||||||||
gi|109974412|gb|DT806895.1|DT806895 RECh0073 Forward and reverse subtractive library of rice sheath after Chilo suppressalis att TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TTTTTTACATAAGCATCAATACCTTATAAATTCATCAAATAGGTAGCCACTACATTGGGAAAACAAGTGGGGGAAGGCAGGGGATCAAGCTCAGGAATTACAACAACTGAAGATTTTTTATGTTTTTAGTAGGTGATACAGACCGGGAAAGCCAGAATTGCATATCTTTAGGAGAAGCTTGTTGCAGAAACTGCAACTCAATCATGTCCTTGGCTTAATCGGCCGTCCAGCTCTGCTCCACAATCTCGCGGACTTTGCGGGTGTACC | |||||||||
gi|89164624|gb|CI101712.1|CI101712 CI101712 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa TGCAGTTGCTGCCTCA-AGCTT EST sequence (targeted fragment marked with yellow): GAATAATAAAATATAATCAGCTGCTTGTTATGCAAAAATCACAACGGATATTGCATACTACAAATACATCTCATAGTCCGCATATTGTCATTACAGCCAATAGTACAAAATAAGATTTTACAGGTTGGAAGTGTTCTTGTCTAGTTCTGATCTTGTGGAATAACTGCTCTTTTCACTGTCTCAATAGCTGGATCTTGTGGAATAACTGCTCTTTTCACTGTCTCAATAGCTGAATTCACAACTCGAACAGACAAGTTTCACATGAAATCAACATTTCATCGAACTTTTAGAATTTATATTTATTAAAAACACAGGTTGATCAAAATAGTGAGCTTGGGTATGCATTCAACGAAGGATTTAACAGCACTAGCTCTCAAGCCTGGCAGGGCGAAAGCTATTAGGCAGTAACTGCAGATGCTATGAGAAATTTTAGCATCATTAGGCGTCCATCAACAGCTCACTTACATTCAGTAAACATTAATTATAGAAGTGGCAAAACAATAATTTAAAGAGAATACAGTTGGTGTTGCATTGCAT | |||||||||
gi|89168746|gb|CI020827.1|CI020827 CI020827 Oryza sativa (japonica cultivar-group) green shoot Oryza sativa Japonica Group cDNA TGCAGTTGCTGCCTCAAGCTT EST sequence (targeted fragment marked with yellow): TTTTAGAAGGGATATTATGCTATAGATATCGAGGGGAAACCCCTAAAACAAAATATACACGAAAAAAATTGTTAAAAACATAAAACACACTGAATTAAATGTCAACGGTTCCATGGTTTCAACTATCCCAGAAAAGCAGGGTTGGCATTTCGAGATCTTCCGTCTCTTAAAACTGAATGGATGCCCATGCTTCAAAATGAAACCCTTGAGGCAGCAACTGAAAGCATGAAAAGAAATCACCAATCTAAAAGTCGTCATCGTCCTCCTCAGCCATGTGTTTTGCTAGTTCTTCCTCCTGTTGGAGCCTCTCGCGCCTCTTCTCAGCACTCTCCTTTTCCTTGTGAGAATTCGGAGGGAACCTCAGTGCTTTGACCGCTTCGTTGTGCATGTTCAAGCAAAATGCAATCCTTGAATTGAAAGCAATCTGTGGCTCATTCGTTGAGTAGACATCACCAGTCTCTTTTGACACCATCCAACCATTGGCATGATCAATGGTGGCA | |||||||||