| mature miRNA: TGCCAAAGGAGAGTTGCCCTG species: Arachis duranensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|296552556|gb|GW934756.1|GW934756 Dur25.root.ADAA-aaf51f05.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence TGCCAAAGGAGAGTTGCCCTG EST sequence (targeted fragment marked with yellow): AGAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGTGTGTGTGTTTGTGTCTCCCTGCAATGGTGGTTCCAAGGCTCGGTGGTGGGTTGGAGGATGGTGGAACCGGGCGTGGAACTAGGCCTATCTGAACAAATAACCATTTCTTCCTTCTTCTAAAAACCACAAGAAAAAAAGTTATTATCTAAGAAGAAAAGAGAAAGATAGTATCTTTCTTTTAAGCTGAAAGCAAAGTTCTGATTTTTGAGAGGTACCCTACTTTCAAATTTGTTATGTTGTGGGTGGAGTTCCTTCTTTTGTTGTTTAGAGTGATGAGGCTTTATTGGGTCTATATCTCTTATACCCTTATATGGGTCCAATCATCTCAATGGTGCAAATGGATCAAAAGAGTTGATCTGGTAAAAGATTAGAAGCCCTTTTGCCATTGATGATTGTGTCATCTGATACAGCTGATGTGTGCTTGGCTTTGTTGTCGAGGCAAATCTTCTTTGGCAATATGGAAGAGGAATTTCTTTTTCCTTTATGGCAATTACTTATGTTTGAAGATTAACTGACAAGGGCAAATCTCCTTTGGCAGAGAGTTCTTTAATTTCTTTTGGTTGGATTCATTCCAGTAATAATATATGAAAGTAACTTT | |||||||||
gi|296549370|gb|GW932994.1|GW932994 Dur25.root.ADAA-aaf24e01.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence TGCCAAAGGAGAGTTGCCCTG EST sequence (targeted fragment marked with yellow): AAAGAAACAAAGTTGTCAATTTGCCATATTCTCTCTGCATGTGTCTCTGAAAAATGAAAATGGTTCCAAAGTTGGGTGGTAGAGTTGAGGGTGGTGGAACTGGCTATGGAACCAGTCCTATCTGAATTTCAATATATAACTGCTTCAACGAAATTCATGGCTGCCAACAACTAACCAACAAACCAACCCTCTTCCAATCTTTGGTGAAGTTCATTCCTTTTTGAGTTATTACTATGGCCCTTTTTGTCTCTTGTGCTGTAACCGTCATGGCTTATATGGGTTCAACTTCAATCTTGTGGCTTCTTTCAATGGTTTAAACGATATGATCTGGTGACAACCTCTTTTGACTTTCAGCAATGATGGATTGGCAATTATGGTTTAGTTTTGACTAAGTTCTTTCAGACGGGTCATCTGAGCATATATTTGTATTCAATTTCACCTTATCTGTTGAATGTTCTAAACCCTTTCGTGCCTTAGAATCTGTAGTGTATGTGTTTTAGATAGTAATTGATATCCTTGGTTCTAGATAGACTTGTGGGGCAAATCTCCTTTGGCAATATAGCTTCCAATCTTGGAAAGAAACAAACTTTATTATCCTTCCA | |||||||||
gi|296552556|gb|GW934756.1|GW934756 Dur25.root.ADAA-aaf51f05.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence TGCCAAAGGAGAGTTGCCCTG EST sequence (targeted fragment marked with yellow): AGAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGTGTGTGTGTTTGTGTCTCCCTGCAATGGTGGTTCCAAGGCTCGGTGGTGGGTTGGAGGATGGTGGAACCGGGCGTGGAACTAGGCCTATCTGAACAAATAACCATTTCTTCCTTCTTCTAAAAACCACAAGAAAAAAAGTTATTATCTAAGAAGAAAAGAGAAAGATAGTATCTTTCTTTTAAGCTGAAAGCAAAGTTCTGATTTTTGAGAGGTACCCTACTTTCAAATTTGTTATGTTGTGGGTGGAGTTCCTTCTTTTGTTGTTTAGAGTGATGAGGCTTTATTGGGTCTATATCTCTTATACCCTTATATGGGTCCAATCATCTCAATGGTGCAAATGGATCAAAAGAGTTGATCTGGTAAAAGATTAGAAGCCCTTTTGCCATTGATGATTGTGTCATCTGATACAGCTGATGTGTGCTTGGCTTTGTTGTCGAGGCAAATCTTCTTTGGCAATATGGAAGAGGAATTTCTTTTTCCTTTATGGCAATTACTTATGTTTGAAGATTAACTGACAAGGGCAAATCTCCTTTGGCAGAGAGTTCTTTAATTTCTTTTGGTTGGATTCATTCCAGTAATAATATATGAAAGTAACTTT | |||||||||
gi|296545424|gb|GW925172.1|GW925172 Dur25.root.ADAA-aad55a04.b1 DUR25-root Arachis duranensis cDNA 5', mRNA sequence TGCCAAAGGAGAGTTGCCCTG EST sequence (targeted fragment marked with yellow): CCTGTTGGCTGTTTTTTCAAATAGTGTCTCCTATTTCTATGTAAGGAAAAGCTTCCATTCACCTCACACCAGAGAGATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACTGTGTGTGTGTTTGTGTCTCCCTGCAATGGTGGTTCCAAGGCTCGGTGGTGGGTTGGAGGATGGTGGAACCGGGCGTGGAACTAGGCCTATCTGAACAAATAACCATTTCTTCCTTCTTCTAAAAACCACAAGAAAAAAGTTATTATCTAAGAAGAAAAGAGAAAGATAGTATCTTTCTTTTAAGCTGAAAGCAAAGTTCTGATTTTTGAGAGGTACCCTACTTTCAAATTTGTTATGTTGTGGGTGGAGTTCCTTCTTTTGTTGTTTAGAGTGATGAGGCTTTATTGGGTCTATATCTCTTATACCCTTATATGGGTCCAATCATCTCAATGGTGCAAATGGATCAAAAGAGTTGATCTGGTAAAAGATTACAAGCCCTTTTGCCATTGATGATTGTGTCATCTGATACAGCTGATGTGTGCTTGGCTTTGTTGTCGAGGCAAATCTTCTTTGGCAATATGGAAGAGGAATTTCTTTTTCCGTTATGGCAATTACTTATGTTTGATGATTAACTGAAAAGG | |||||||||
gi|296562931|gb|GW947347.1|GW947347 Dur25.seed.ADAA-aaa98g08.b1 DUR25-seed Arachis duranensis cDNA 5', mRNA sequence TGCCAAAGGAGAGTTGCCCTG EST sequence (targeted fragment marked with yellow): AACAACTAACCAACAAACCAACCCTCTTCCAATCTTTGGTGAAGTTCATTCCTTTTTGAGTTATTACTATGGCCCTTTTTGTCTCTTGTGCTGTAACCGTCATGGCTTATATGGGTTCAACTTCAATCTTGTGGCTTCTTTCAATGGTTTAAACGATATGATCTGGTGACAACCTCTTTTGACTTTCAGCAATGATGGATTGGCAATTATGGTTTAGTTTTGACTAAGTTCTTTCAGACGGGTCATCTGAGCATATATTTGTATTCAATTTCACCTTATCTGTTGAATGTTCTAAACCCCTTCGTGCTTTAGAATCTGTAGTGTATGTGTTTTAGATAGTAATTGATATCCTTGGTTCTAGATAGACTTGTGGGGCAAATCTCCTTTGGCAATATAGCTTCCAATCTTGGAAAGAAGCAAACTTATTATCCTTCCAAAAGAAGTTGTTTATGTTTGAAGACTCTGCTCTGTTGGGCATTGGGCAAATCTCCTTT | |||||||||