miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGCCAAAGGAGATTTGCCC
species: Manihot esculenta
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|164373532|gb|DB934725.1|DB934725 DB934725 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_041_I0

TGCCAAAGGAGATTTGCCC
|||||||||||| ||.|
ACGGTTTCCTCTTAATGCT

EST sequence (targeted fragment marked with yellow):
AATGAACTATCTGCCGATTGTGCACATATTCCAAAAATGAAGGCACATCTGGGTATCGGCAATCTTCTTCACCCGCAAGAGGAGTTTTCTGAAAGCAAATTATGTCTCCATCTTCAAGCTGACTTAATCGAAATGAGGTCCTTTTATCAAGATGTTCACACATGACACAAGGCTCAAACTTTATTTCCTCATAAAGTTCAATCTCTTCATCAGATGCAATAACAGCCATTTGTTTAAGCTTTGCCAAGATTTCCATTGGTTTTCCAGAACCCTTCACAAAAAGCCTACCAACATATCGTAATTCTCCTTTGGCAGGATCATAAAGCTTGAAGAAAAGAAGAATATCTTCTTTAGTTTTTTCAGGAGGAGCAATAGGACGTAAATCCAGTCCAAACTCTACTTCCAAGAACAACTTCAATTCTGCATTGTGTGCTTTATTTGAAACTTCCCTCAGCTGTCCAACTGATTGCGCTTCCTCATGAGCAGTTAGTGGTCGATTGGGACGATATGTATGATTTTGACGCTTTGCCCATATCCAAAATCGCTGAAGTTGTACTGGTACACCAAATTCTTTGGCAACCTCTTCCTTAAAATGACTAAATGATGTCTGCTTCTGGA



gi|164389365|gb|DB940655.1|DB940655 DB940655 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_006_M1

TGCCAAAGGAGATTTGCCC
|||||| ||||| |.|||
ACGGTTCCCTCTCAGCGGA

EST sequence (targeted fragment marked with yellow):
GAGGGGCGTGCATGGTCGAGGAATGGCAGGCGACTCTCCCTTGGCAAACGGATGATGATCACTATTCACCATGCAAATTAATGCATAATCTGCTTTGCCAAAGGAGAATTGCCCTGCCATTTCTAATATCATACATTTATCAAATGCAGTTTATTAACTATTCAACTTAACCTCTTTATCCATGCCATTAATGGGATTTCTTTTCTTTCTTTCATCATTTGGCAGGTAATTGCTTATGTCAGTGTTTTGAAGAGCACAAAGGATCAGCAAGTCAGTGGGATATTGATCCATGCTTGAAGAATCTATTGATGTGGAGCTGGATGATTATAAGCACTTGATTGATCCGCCAAACAGCAACTTTTCTTCAAAATCATCTCATTAATTATTATTTCCTTTTTGAATGTCGAAATTCAGAACTTTTATATTGGGTCTGAATCTTCAACGGCCTTTGTAGC



gi|119013553|gb|DV455138.1|DV455138 CV02017B2F10.f1 CV02-normalized library Manihot esculenta cDNA clone CV02017B2F10.f1, mRNA s

TGCCAAAGGAGATTTGCCC
|| ||||||||||||. |
ACCGTTTCCTCTAAATAGA

EST sequence (targeted fragment marked with yellow):
TGCTCTGGATCCTTACTCCTCTGATGGGCATGATGGTATTGTCAGAGAAGACGGAGTTATAATGAATGATGAAACAGTGCATCAACTATGTAAACAAGCTGTTTCTCAGGCCAGAGCTGGGGCAGATGTTGTTAGTCCTAGTGACATGATGGATGGCCGTGTTGGAGCAATTCGGACAGCTCTAGATGCAGAAGGCTTTCATCATGTTTCTATCATGTCCTACACAGCAAAATATGCTAGTTCATTTTACGGTCCATTCCGAGAAGCACTGGACTCAAATCCACGATTTGGAGACAAAAAGACTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGATTGAGGCTCGTGAAGATGAGTCTGAAGGAGCTGATATCCTTCTGGTGAAACCGGGTCTTCCCTATTTGGATATTATAAGGCTTCTCAGAGATAAATCTCCTTTGCCAATTGCTGCATATCAGGTATCAGGTGAATACTCAATGATTAAGGCTGGTGGAGTTCTCAAAATGATTGATGAAGAAAGGGTGATGATGGAGTCTCTGATGTGTCTTCGACGGGCTGGTGCTGACATCATCCTCACATATTTTGCTCTACAAGCTGCTAGATGTTTATGTGGTGAGAAGAGGTAAATTCAGTAT



gi|164395258|gb|DB928268.1|DB928268 DB928268 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_023_M2

TGCCAAAGGAGATTTGCCC
|||||| ||||| |.|||
ACGGTTCCCTCTCAGCGGA

EST sequence (targeted fragment marked with yellow):
GAACGGTGGCGTGCATGGTCGAGGAATGGCAGGCGACTCTCCCTTGGCAAACGGATGATGATCACTATTCACCATGCAAATTAATGCATAATCTGCTTTGCCAAAGGAGAATTGCCCTGCCATTTCTAATATCATACATTTATCAAATGCAGTTTATTAACTATTCAACTTAACCTCTTTATCCATGCCATTAATGGGATTTCTTTTCTTTCTTTCATCATTTGGCAGGTAATTGCTTATGTCAGTGTTTTGAAGAGCACAAAGGATCAGCAAGTCAGTGGGATATTGATCCATGCTTGAAGAATCTATTGATGTGGAGCTGGATGATTATAAGCACTTGATTGATCCGCCAAACAGCAACTTTTCTTCAAAATCATCTCATTAATTATTATTTCCTTTTTGAATGTCGAAATTCAGAACTTTTATATTGGGTCTGAATCTTCAACGGCCTTTGTAGCATGCAATAATTTGCCCTTCGTTGAAACCCATTAACATTTTTACTCAAATATTTCAGGATTATGCAATGGGATTGGGTTTAGCTTATCAATGTAATAAGATGCACACGTGTGATCAATATATATACACATGCATG



gi|182383055|gb|FF380594.1|FF380594 CASLA96TR CASL Manihot esculenta cDNA 3', mRNA sequence

TGCCAAAGGAGATTTGCCC
||||||||.|| .||. ||
ACGGTTTCTTCCGAATTGG

EST sequence (targeted fragment marked with yellow):
ACCACCGACGCTAAGAACGAAGACATGAGAACTAAGCGTGAGAAAAGAATGGCTATGGCCAAACGCGGTATTAAATCGCTAGGCGTAGCAGTCGCCTTGCCTCTTGCTTTGTCCCTTTTCAATATCTACTTCTTCGGCTCCAGAAACGGCTATGGCAACATATCGAAACCTTTTTGGTTCCCGCCTATGTGGGCTCTACACTTTGCCTGCTTGAGTTCCACCTTCTTAATGGGTCTCTCCGCTTGGCTCGTTTGGGCTGAAGGAGGGTTCCACAAAGAACCAACGACTCTATCTCTCTACCTGGCGCAGCTAGGTCTGAGTTTCGCTTGGGAACCGATTGTGTTCCGGATGGGAGCCACATGGTTCGGTTTGGTTGTGTGCTTGGCTATGTTTGGGGCTCTCGTTGGTTGTTCTCGCAAGTTTATGAAGCTGAATCCGATCGCTGGAGATTTGGTTAAGCCTTCTTTGGCATGGGCTACAGTTGTAGCCATTGTAAATCTAAAGCTTGCTTTAGTATGAAATCTTGGAAGTACAGGCTAGAGGGATTGTTGTTTGAGAGAAGACTTTGATGGTGTTTTTGTAAAATCGTAACAGCTTTACGTGCTTTTATATAATTTATATATAGGTAGTTCCTGTAAAATGTTTTCTTTTCTTCGTTCTTTTTCTTTCTAGTTTCGTGGTTATGGCCTTTATTCTCAACTTGTGACTAGCGAGAATTTCATCTTGCTATTGTAAAAAGATCTTAGAAGTGCGTTATGAAAAGTTTGAAAGACATTTTTGCAGCTTTTTTTTCC



gi|182641672|gb|FF536619.1|FF536619 CASRQ40TF CASR Manihot esculenta cDNA 5', mRNA sequence

TGCCAAAGGAGATTTGCCC
|||||||.|||||||. |
ACGGTTTTCTCTAAATTGA

EST sequence (targeted fragment marked with yellow):
GGAAAGGGAGGAGAAGATGCAGAGGTCATCGAGCAGTTCTTGGCTGCCTGCAGAGTTCTTCAATAACACCACCACCAAGTACACAGACAACGACCAGCAACAACTCCCCACTTACGATCCTCTCCCATGTTGCGAAGAAGGAGAAGTCTCGTCTCAGATCTGCAGAGAACGCTATTCATCTCATCCCTCTTGTTCTTGTTCTATGTGCCATCATCCTTTGGATCTTCTCTAGCCCAGAGTCAAGGGTTTGAAGTTTGATGGATTACCTATTTTAGTATCAGTTCCTAGAGTGGTTTGCTATAGAGCTTGAAGCCAGAGCACTTAAATCAAACAAAAAAACAACTGATTCATTACATCTCATCAAAGGGATTAGCACATACAAGCAAAGCAGTTAAATCTCTTTTGGCATATTTGCCGCATGTTTGTAAAAGTTTTATGATGTAAAAGGATTTCTTTTTACACAAATTCAATTCTTATACTAGTTTTCTTTAAATGAGGAAGGATGCTATATATGTCTTTGATGTTAAGTGGCGTTTGTTTTACCAGTTTTTTAGGTTGCTTCCTAGTGAGGAAGATGGGTAAATGCCATAACAAGCTTGGCAACATAACAGGGGAGAGCAGAGTGAAACTTCATTATGTGACGCTTATAATACAATTTATATTTCTATTAATGTT



gi|164405023|gb|DB938548.1|DB938548 DB938548 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_052_C0

TGCCAAAGGAGATTTGCCC
|||||| ||||| |.|||
ACGGTTCCCTCTCAGCGGA

EST sequence (targeted fragment marked with yellow):
GGTGGCGTGCATGGTCGAGGAATGGCAGGCGACTCTCCCTTGGCAAACGGATGATGATCACTATTCACCATGCAAATTAATGCATAATCTGCTTTGCCAAAGGAGAATTGCCCTGCCATTTCTAATATCATACATTTATCAAATGCAGTTTATTAACTATTCAACTTAACCTCTTTATCCATGCCATTAATGGGATTTCTTTTCTTTCTTTCATCATTTGGCAGGTAATTGCTTATGTCAGTGTTTTGAAGAGCACAAAGGATCAGCAAGTCAGTGGGATATTGATCCATGCTTGAAGAATCTATTGATGTGGAGCTGGATGATTATAAGCACTTGATTGATCCGCCAAACAGCAACTTTTCTTCAAAATCATCTCATTAATTATTATTTCCTTTTTGAATGTCGAAATTCAGAACTTTTATATTGGGTCTGAATCTTCAACGGCCTTTGTAGCATGCAATAATTTGCCCTTCGTTGAAACCCATTAACATTTTTACTC



gi|119017536|gb|DV453839.1|DV453839 CV02014A1D03.f1 CV02-normalized library Manihot esculenta cDNA clone CV02014A1D03.f1, mRNA s

TGCCAAAGGAGATTTGCCC
..||||||||| |. ||||
GTGGTTTCCTCAAGTCGGG

EST sequence (targeted fragment marked with yellow):
AACTTCGGCGGCACTTTCTCCTGCAACATTTGCAGCNNNGACGATTTCCAGCCCTAAGAGGAAGAGCATGAATGTGAATTACATAACTGGGCTGAACTCCTTTGGTGGGTTAAAAGCTCACAACAGTGTGAGCTCATTAGGGCTGCCTGTGTGCACTGAGCGGTCATTTGCAAAGGTGGTGAGCTCTCTGAGGACCTCATCAAACAGGAAAGGCAGAGGTGGTGGTGGTGGTGCACTCTCTTCAACTTGCAGTGCTATTGATGAGATTTTCAGGATTGCAGCAATCATGAATGGGCTTGTTCTTGTTGGAGTTGCAGTGGGATTTGTTCTTCTTCGAGTTGAAGCATTTGTTGAGGAATCTGAGTGAGAAACTCTTAAATTTGGTGCCTGATTCCTTCAGTGTTCTTCATTGCATCTTTCTTCTGTTATTCAATTTCATGTAGTTATTAGAGATTGAATTCCTATTTTGAAACTGTATAAATAATTCAATACATGAATTCTGTTCTAGTTTTGAACAGAATTAGAAAAAAAAAAAAAAAAAAAAAANNNAAAAAAAAAAAAAAAATTGC



gi|119004925|gb|DV446910.1|DV446910 CV01020B1B02.f1 CV01-normalized library Manihot esculenta cDNA clone CV01020B1B02.f1, mRNA s

TGCCAAAGGAGATTTGCCC
|||||||.|||||||. |
ACGGTTTTCTCTAAATTGA

EST sequence (targeted fragment marked with yellow):
TCTCCTTCTCCATATTAAAGGGAGGAGAAGATGCAGAGGTCATCGAGCAGTTCTTGGCTGCCTGCAGAGTTCTTCAATAACACCACCACCAAGTACACAGACAACGACCAGCAACAACTCCCCACTTACGATCCTCTCTCCCATGTTGCGAAGAAGGAGAAGTCTCGTCTCAGATCTGCAGAGAACGCTATTCATCTCATCCCTCTTGTTCTTGTTCTATGTGCCATCATCCTTTGGATCTTCTCTAGCCCAGAGTCAAGGGTTTGAAGTTTGATGGATTACCTATTTTAGTATCAGTTCCTAGAGTGGTTTGCTATAGAGCTTGAAGCCAGAGCACTTAAATCCAACAAAAAAACAACTGATTCATTACATCTCATCAAAGGGATTAGCACATACAAGCAAAGCAGTTAAATCTCTTTTGGCATATTTGCCGCATGTTTGTGAAAGTTTTATGATGTAAAAGGATTTCTTTTTACACAAATTCAATTCTTATACTAGTTTTCTTTAAATGAGGAAGGATGCTATATATGTCTTTGATGTTAAAAAAAAAAAAAAAAAATCG



gi|164395169|gb|DB946138.1|DB946138 DB946138 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_023_M2

TGCCAAAGGAGATTTGCCC
|.||||||.||||||||||
ATGGTTTCTTCTAAACGGG

EST sequence (targeted fragment marked with yellow):
TCAAAATCATCTCATTAATTATTATTTCCTTTTTGAGCCTCGAAATTCAGAACTTTTATATTGTGTACGGAACTTCAACGGCCTTTGTAGCATGCAATAATTTGCCCTTCGTTGAAACCCATTAACATTTTTACTCAAATATTTCAGGATTATGCAATGGGATTGGGTTTAGCTTATCAATGTAATAAGATGCACACGTGTGATCAATATATATACACATGCATGAAAAAGAAATCATTCAACTAGAACTTACTAACACTATCATAGAATTCCAAGAGAAGCTGAAAATAAAGGCATTGCTTGAGAGAGAATTGTATGGACTGAATTGTGGGGCAAATCTTCTTTGGTAGTAGGCCTACTCTTTGTAGTTGATTACAACATGAGTTGCCAACTGCCAAAGCAAGAATTGCCCAGGAATGCATACCCATAAACATAAGGGTACGTACCCTTAAACTATGTACTGATGAAACAGTGCCCATAAACATAAGGGTGCGTACCCTTAAACTTTGTACTGATGAAACAGTTTCAAGGTTCAATAGTAATTTATAGTTCAGT



gi|219223915|gb|FG806840.1|FG806840 K018G01 Cassava root 210-day-old plants cDNA library Manihot esculenta cDNA, mRNA sequence

TGCCAAAGGAGATTTGCCC
|||||||.|||||||. |
ACGGTTTTCTCTAAATTGA

EST sequence (targeted fragment marked with yellow):
CTATGTGGCATCATCCTTTGGATCTTCTTTAGCCCCAAGTCCATGGGTTTGACGTTTGAATGGATTACTAATTTTACTATCACGTTCCTAAAGTGGTTTGCTATAGAACTTGAAGCCCGAACCACCTTAATCAAACCAAAAAACCACTGATTCATAACATCTCATCCAAGTGGATTAGCACATACAAGCCAAGCAGTTAAATCTCTTTTGGCATATTTGCCGCATGTTTGTAAAAGTTTTATGATGTAACAGGATTTCTTTTTACCCAACTTCAATTCTTATACTAGTTTTCTTT



gi|164380780|gb|DB931132.1|DB931132 DB931132 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_031_L1

TGCCAAAGGAGATTTGCCC
|||||| ||||| |.|||
ACGGTTCCCTCTCAGCGGA

EST sequence (targeted fragment marked with yellow):
GAACAATGGCGTGCATGGTCGAGGAATGGCAGGCGACTCTCCCTTGGCAAACGGATGATGATCACTATTCACCATGCAAATTAATGCATAATCTGCTTTGCCAAAGGAGAATTGCCCTGCCATTTCTAATATCATACATTTATCAAATGCAGTTTATTAACTATTCAACTTAACCTCTTTATCCATGCCATTAATGGGATTTCTTTTCTTTCTTTCATCATTTGGCAGGTAATTGCTTATGTCAGTGTTTTGAAGAGCACAAAGGATCAGCAAGTCAGTGGGATATTGATCCATGCTTGAAGAATCTATTGATGTGGAGCTGGATGATTATAAGCACTTGATTGATCCGCCAAACAGCAACTTTTCTTCAAAATCATCTCATTAATTATTATTTCCTTTTTGAATGTCGAAATTCAGAACTTTTATATTGGGTCTGAATCTTCAACGGCCTTTGTAGCATGCAATAATTTGCCCTTCGTTGAAACCCATTAACATTTTTACTC



gi|164401761|gb|DB924911.1|DB924911 DB924911 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_014_H1

TGCCAAAGGAGATTTGCCC
||||||||.|||| || ||
ACGGTTTCTTCTACACCGG

EST sequence (targeted fragment marked with yellow):
CGGGGGAAAATTAAGGAGATAAGAGGAAAATAATAAAAATCTTGATTACCCTTCTTATCCAAGAGAGAAAGGCCACATCTTCTTTGGCAATATCATATTCCTTTGCGAGTGGTTCATTAAGAGAAGAGAAGAGAAGACATGGCTATGAAGAACTGTTTTCAAGTGAGTACAGTGTGCACTGGTGCTAGAGCTGGAGTATTATTTGCTCCAGTAGAGAAGCTTCATTTACCAACTTCCTGTAGAGGATTTAATAATCAATCCAATTCTTCATCATTGTCTTCCTCCTCTTCTTCTTCTTCCTTTGCTCATTCACTCACTACTCTCAGAAGAAGAAGCCAAAAATCCCGCTTTGTCTGCAAAGCTCGGGAAGCTTTAGATGAAGGTTTGTCATTTAGCTCCTCCTTCACAGCTCCAGTTTAGTTTTTTTTCTTTTCTTTTCTTTTAATATTTATACATTATGTGATCTTTTCTATGCCTCATTTTCTAGTTGCTGCCATTGGAATGGTAGTTCTTGAG



gi|164383014|gb|DB949359.1|DB949359 DB949359 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_033_O1

TGCCAAAGGAGATTTGCCC
.||||||||| |||| ||
TTGGTTTCCTCCAAACTGG

EST sequence (targeted fragment marked with yellow):
TAGGCCTGAGAGATATGATAGAAATCTGGCTGAGAATACTCTCAAGGCCCTTGGGAAGATTGATAAAGTCAGATCTAACAGGGAAGCTAAACACATTGAAAAGAGGATGAAGGGCAAGAAAAGCAAGGAGCAGAGAGAGGCTGCAAAGGAATTGGAGCAGAGCATCCACATGGTCAAACCTCCTTTGGTTCTTGCTCAAGAGCCATCTCTTACATTGCCCAAGATCAAGGCCAAGGTCTCACAACAGCAAGCCGACGAAAACCATGCAGTGGAGGAGTGATGTTTTACTGGTTTATCCATGCTTTTATCCCCAGTTATTTTCTTCTTTTTCTTTTGGTTCCTACTTTCTTTCTTTTTTCCCTTTTCTTTTTCGTTTGTGAGAACACGTAGATGATAAAGGGGTTTGAGTATATCAATCAAG



gi|119019650|gb|DV457638.1|DV457638 CV02025A1C06.f1 CV02-normalized library Manihot esculenta cDNA clone CV02025A1C06.f1, mRNA s

TGCCAAAGGAGATTTGCCC
..||||||||| |. ||||
GTGGTTTCCTCAAGTCGGG

EST sequence (targeted fragment marked with yellow):
AAAACCAGGTAACCCATTTTCTACTTCTACAATTTATATACCATATTATTAAATCTCCCTTCATTTTTCATTACAGCTGGTTTTTGTTCACAGAACAATGGCAGCAACTTCGGCGGCACTTTCTCCTGCAACATTTGCAGCGGCGACGATTTCCAGCCCTAAGAGGAAGAGCATGAATGTGAATTACATAACTGGGCTGAACTCCTTTGGTGGGTTAAAAGCTCACAATAGTGTGAGCTCATTAGGGCTGCCTGTGTGCACTGAGCGGTCATTTGCAAAGGTGGTGAGCTCTCTGAGGACCTCATCAAACAGGAAAGGCAGAGGTGGTGGTGGTGGTGCACTCTCTTCAACTTGCAGTGCTATTGATGAGATTTTCAGGATTGCAGCAATCATGAATGGGCTTGTTCTTGTTGGAGTTGCAGTGGGATTTGTTCTTCTTCGAGTTGAAGCATTTGTTGAGGAATCTGAGTGAGAAACTCTTAAATTTGGTGCCTGATTCCTTCAGTGTTCTTCATTGCATCTTTCTTCTGTTATTCAATTTCATGTAGTTATTAGAGATTGAATTCCTATTTTGAAACTGTATAAATAATTCAATACATGAATTCTGTTCTAGTTTTGAACAGAATTAGAAAATTTGAATTAATGGCAAGATAATCAAATTGAAAAAAAAAAAAAAAAAATGC



gi|164396191|gb|DB946336.1|DB946336 DB946336 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_024_H0

TGCCAAAGGAGATTTGCCC
.||||||||||||||||
GCGGTTTCCTCTAAACGTT

EST sequence (targeted fragment marked with yellow):
ACAGAGGCATGGTAAATCCTCTTATAGTGATTGTATACAGCAGTAGAACGGTCTTTTAGGACTCAGCAGTACTCTATAACGAACTCATCAAGGCCCTTGCAAATCTCCTTTGGCGTGGGTAAGTCCTTCCCCAAATTAGATCCACCCCATCCACCAGTCCTTTCCCCTCCTCCAGCTGCTCTACCATTTGATCCACTTCCTCCACTTGGCTCGGTGGCTCTAATCACATTAACCCCAGGGGCAAATGGTGGGCCAGGTGGAGTATGAACTGCCAGGACATTCTCACCAGGTGGAGGCAAATTCTCAGGTGGGTCCCCTGCGTAAGTCCTGAGAGTGTCCCAAAAGGAGGCCCTGAGTCCATTACTAATACCATTGGTGTAATCCTCCGGGGAATCTTGAGTGGCGTTATCCTTGGATTGTTTGGTGGAGTTTCTGTTTTTGGGTTTAGAGTTAGTAACTCTGCCAATTTCAATGAAGCTACCCTGAAGAGGAGCAATCTTGTAAGGACGGAAGTAATAGGCGGTTTTACAACTGGGGCAAAAATTAACGGCTTGATAGCTGCTGCTAGTACTGTTAGGTCCTCCAAGACTGGAGCACTCTTGATTG



gi|164387214|gb|DB922775.1|DB922775 DB922775 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_008_J0

TGCCAAAGGAGATTTGCCC
|| ||||||||||||. |
ACCGTTTCCTCTAAATAGA

EST sequence (targeted fragment marked with yellow):
TACGGTTGTTGAAGGACAAATATCCCGATCTTGTTATTTACACTGATGTTGCTCTGGATCCTTACTCCTCTGATGGGCATGATGGTATTGTCAGAGAAGACGGAGTTATAATGAATGATGAAACAGTGCATCAACTATGTAAACAAGCTGTTTCTCAGGCCAGAGCTGGGGCAGATGTTGTTAGTCCTAGTGACATGATGGATGGCCGTGTTGGAGCAATTCGGACAGCCCTAGATGCAGAAGGCTTTCATCATGTTTCTATCATGTCCTACACAGCAAAATATGCTAGTTCATTTTACGGTCCATTTCGAGAAGCACTGGACTCAAATCCACGATTTGGAGACAAAAAGACTTATCAGATGAACCCAGCAAATTACAGAGAGGCTCTGATTGAGGCTTGTGAAGATGAGTCTGAAGGAGCTGATATCCTTCTGGTGAAACCGGGTCTTCCCTATTTAGATATTATAAGGCTTCTCAGAGATAAATCTCCTTTGCCAATTGCTGCATATCAGGTATCAGGTGAATACTCAATGATTAAGGCTGGTGGAGTTCTCAAAATGATTGATGAAGAAAGGGTGATGATGGAGTCTCTGATGTGTCTTC



gi|119004842|gb|DV446727.1|DV446727 CV01020A1A10.f1 CV01-normalized library Manihot esculenta cDNA clone CV01020A1A10.f1, mRNA s

TGCCAAAGGAGATTTGCCC
||||| |||| |||.|||
CCGGTTACCTCAAAATGGG

EST sequence (targeted fragment marked with yellow):
GCCTGGAGGGACAATTCATCCCTTGACAAGGTATGTGATGAATTATATCAGTTTGATTTCAGATTATAAACAGACCTTGATCGAGCTTATTTTGTCAAAACCATCAACTGGGTCAAGTTATTCTGGTGATTCAACAACCCCAGATATGGAATTTGCTGAGCTAGAGGGTAAAACTCCATTGGCCATTCATTTGATTTGGATTATTGTAATTCTGCAATTCAATTTGGATGGCAAGTCCAAGCATTACAAAGATGTATCATTAGCTCACCTTTTTATGATGAATAATGTTCACTATATTGTTCAAAAAGTAAAAGGGTCACCTGAATTGAGAGAAATGATAGGTGATGATTACTTGAGGAAACTAACAGGGAAGCTCAGGCAGGCAGCTACCAGTTACCAGAGAGCTACTTGGGTGAGAGTGTTGTATTGCTTGAGAGATGAGGGCTTACATGTGAGTGGGAGTTTCTCTTCTGGGGTTTCAAAGAGTGTTTTAAGGGAAAGGTTTAAAACCTTCAATGCTATGCTTGAAGAGGTTCATAGGACTCAAGCAACATGGCTGGTGCCGGATAATCAACTGAGGGAGGAGCTTCGAATATCGATATCCGAGAAGTTGATTCCGGCTTACAGGTCATTTCTTGGGAGGTACAGGAGTCATATAGAAAGCGNNNNGCACCCGGAGAACTATATGAAGTATTCAGTTGAGGATTTGGAGAGTGCTGTGTTGGATTTCTTTGAAGGGTACCCTGTATCTCAGCTCTTG



gi|119009714|gb|DV447156.1|DV447156 CV01021A1H08.f1 CV01-normalized library Manihot esculenta cDNA clone CV01021A1H08.f1, mRNA s

TGCCAAAGGAGATTTGCCC
.|||||||.|||.||.||
GCGGTTTCTTCTGAATGGA

EST sequence (targeted fragment marked with yellow):
CAAATCTTATCGGGGCGACAGAGATTTCAGTTGNNNNNTTGGCAGAGTCATTAATGTTGGGAGTTGCAATAATTGCAAATGACATTTCACATTTTGGATTTTTAGCAATGCTGTCACTTTTATCAGTAGTTGGGGCAGCATGGATGTTTTGTCGATGGTTGTCGAATCCAACAGATGAACAAAGAAGTCTTTTCTCTATCAGCCTAGGTTATAATTTTTAGCTTTCCAATTCGAAGGAACACAGATCAAGGCTTTTAACTGTTACAGGAGCCAAGCTAAAGCCATTTCAGAATACATGTTCCAGAATCAGCATGTGTATAGCAGCCACAGAAGGCCTTGAGGTAAGTCTTCTTTGGCGACTTAGTGGGTCAGAGTTTCTGTAATTGCACGGCTCAGTTGAAATAGCATTGTCACTTGACTTTGTATCATATTGGACAGTGTCCATGTATAGTGGAGAGGAGAATGAAAGGAATTTCTTTCCCCCTAATGCTGTAAAAACAGTTGAAACAGGAAAAAAAAAATTGTAAAGGTTTTGATTTATTTAAAAAAAAAAAAAAAAAATCG



gi|164407026|gb|DB929717.1|DB929717 DB929717 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_027_M2

TGCCAAAGGAGATTTGCCC
|||||| ||||| |.|||
ACGGTTCCCTCTCAGCGGA

EST sequence (targeted fragment marked with yellow):
GGGCGTGCATGGTCGAGGAATGGCAGGCGACTCTCCCTTGGCAAACGGATGATGATCACTATTCACCATGCAAATTAATGCATAATCTGCTTTGCCAAAGGAGAATTGCCCTGCCATTTCTAATATCATACATTTATCAAATGCAGTTTATTAACTATTCAACTTAACCTCTTTATCCATGCCATTAATGGGATTTCTTTTCTTTCTTTCATCATTTGGCAGGTAATTGCTTATGTCAGTGTTTTGAAGAGCACAAAGGATCAGCAAGTCAGTGGGATATTGATCCATGCTTGAAGAACTATTGATGTGGAGCTGGATGATTATA



gi|56918989|gb|CK643326.1|CK643326 rni.06.J4.5 MBra685 cassava lambda zap Manihot esculenta cDNA 5', mRNA sequence

TGCCAAAGGAGATTTGCCC
.||||||.||| .|||||
TTGGTTTCTTCTCGACGGG

EST sequence (targeted fragment marked with yellow):
CACAACCACAGGAAGATACAAGAGAGAAGAAAAACAGGAAAAGAGCTTGTGAATTGAGCTAGCTAGATAGCCATGGCTAAGGAATTACAGGTTCTTAATGCGCTTGACGTAGCGAAAACACAATGGTACCACTTCACTGCAATTATCATTGCAGGAATGGGCTTTTTCACAGATGCATATGACCTCTTTTGCATATCTCTTGTGACCAAACTTCTCGGTCGCATATACTACCATGTTGATGGTGCAGAGAAGCCTGGAACTTTACCTCCTAACGTATCAGCCGCTGTTAATGGTGTAGCATTTTGTGGAACTCTGGCAGGGCAGCTCTTCTTTGGTTGGCTCGGGGACAAGATGGGGCGGAAGAGAGTCTATGGCATGACACTCATGCTCATGGTGATATGCTCGGTCGCCTCAGGTGTTTCTTTTGGTCACAATGCTAAAGCTGTGATATCAACCCTTTGCTTCTTCCGGTTTTGGCTCGGGTTTGGCATTGGTGGTGACTACCCACTTTCTGCCACAATCATGTCTGAATATGCTAACAAAAAGACTCGAGGAGCCTTCATTGCTGCTGTATTTGCCATGCAGGGCTTTGGAATTTTGGCAGGCGGCTTATTTGCCATAATTATATCATCTGCATTTCGTACCAGGTTTGATGCTCCAGCTTATGAGGTTGATGCAGTTGCCTCTACCGTGCCGCAGGCCGACTACGTTTGG



gi|164403565|gb|DB947384.1|DB947384 DB947384 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_027_M2

TGCCAAAGGAGATTTGCCC
|||||| ||||| |.|||
ACGGTTCCCTCTCAGCGGA

EST sequence (targeted fragment marked with yellow):
CACGGGCGTGCATGGTCGAGGAATGGCAGGCGACTCTCCCTTGGCAAACGGATGATGATCCTACATAGGCATGCAAATTAATGCATAAACTGCTTTGCCAAAGGAGAATTGCCCTGCCATTTCTAATATCATACATTTATCAAATGTAGATGATTAACTATTCAACTGCGGATCTTTATCCATGCCATTAATGGGATTTCTTTTCTTTCTTTCATCATTTGGCAGGTAATTGCTTATGTCAGTGTTTTGAAGAGCACAAAGGATCAGCAAGTCAGTGGGATATTGATCCATGCTTGAAGAATCTATTGATGTGGAGCTGGATGATTATAAGCACTTGATTGATCCGCCAAACAGCAACTTTTCTTCAAAATCATCTCATTAATTATTATTTCCTTTTTGAATGTCGAAATTCAGAACTTTTATATTGGGTCTGAATCTTCAACGGCCTTTGTAGCATGCAATAATTTGCCCTTCGTTGAAACCCATTAACATTTTTACTCAAATATTTCAGGATTATGC



gi|164383208|gb|DB944206.1|DB944206 DB944206 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_017_K0

TGCCAAAGGAGATTTGCCC
||||||..|||.||| ||
CCGGTTTTTTCTGAACAGG

EST sequence (targeted fragment marked with yellow):
TCGCAAACTAGAGATTCGAGATTGCCCCTTTGGGGACAAGTCTTTTTTGGCCAATGCTGCAAAGCTTGAGACAATGCGATCCCTTTGGAACTGCTCTTGCTCAGTGAGTTTTGGTGCATGTAAGCTACTAGGTCAGAAGATGCCTAGCCTCAATGTTGAAGTTATTGATGAGAGGGGACCTCCAGATTCAAGACCAGAAAGTTGTCCTGTAGAGAAACTTTACGTTTATAGGACTGTTGCTGGGCCTCGATTTGACATGCCTGGTTTCGTTTGGACAATGGATGAAGATTCTGCATTGAGGTTTTCTTGACAGATTTCTATATTTTCCCACTTCTGCCTCCTTGCCAGTGGTGAATAGATATAGCAGTTACATGCTCCAAATGCTACTCATTGTTGCACACTTAAATTTCAGTAGCTTGATACAAATGCAGCCCCATTGGACTGGGAACAAGAATGGACGGTATACTGAGGCTTGAGAGCTTAATTGCCATCCTATTTTACTCTTTGGCTGAGCTACTAGTTAGCAGTTGGTGATTAATAAAGAGATGGAAACTTGAATTTGTTGTAGC



gi|164394469|gb|DB945966.1|DB945966 DB945966 full-length enriched cassava cDNA library Manihot esculenta cDNA clone CAS01_023_D1

TGCCAAAGGAGATTTGCCC
|||||||||||| ||||||
ACGGTTTCCTCTTAACGGG

EST sequence (targeted fragment marked with yellow):
GGCGTTGGAGTTTGTTGTGATTTTGGTATGCTGCTACTGGGAGACGAAGAGAACTGATAGCGGCCAAAGGGTTAGTAATCCTCTCTCTTCCTAGATGATTGTTCATTTCATTGATAAAATTGCATCGACTCCTCAATACTGCCCTTCAAATTCAACTTCAACTTTTGGGCATATAAGAATCTAGAAATTGCAAAAACCATTTCATTAGAGTTTACTAAAACTTCCATGTAGCTAGGGTTTCCCTAATTAAATATTCCAGCTGTATCTATGATCTGCCTGCGAGTAAGATATCCTGGAAATGTGTCTGCTTCAAGTTGCCTCTTCAACCAGAACCATCAGTGCCTTGGGCAGTTGAACATGGCATGCATTTACGAGACAATTGTGTAATTAGTAGTGTAGTTGAATAACAGGGCAATTCTCCTTTGGCAGCTATCAGTTTAGCAGACTGGTTAACAGCAGAATACCAAATTCCTGCCAAAGGAGAATCGCACTGATATTCTTCACTACCCTCTAGGAGTA