| mature miRNA: TGCCAGACCCAACACCCTTGG species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73869422|gb|DT472160.1|DT472160 WS01225.BR.1_H21 PT-GT-FL-A-3 Populus trichocarpa cDNA clone WS01225_H21 5', mRNA sequence TGCCAGACCCAACACCCTTGG EST sequence (targeted fragment marked with yellow): GCTTCAAATAGTTCGGCAGTTCCAAGGGTTAGACTCACTCTGGGCTGTTGAACTTGGGCTTTCTTGGGAAAATAATCGTCTTCAAAATAAAACAAAACTGATTCCAGAAAGAAAGAAAACGCCGTTTCCTTTTATTGGGGGGGTTGGGTTTGGCAGAGAATTATTGGGGTTTAGGCAAGTCAGAATGGAGGGGTTTAAACAACTCTGGGAGCATATGCAGTCAATGGATCGCACATCAGAGAAGATTGCCTATGGTGCGGGTGTTGCCGCTGGAACTGTAGGAGGAGTTGCTGGTGTAGTATGCGGCAGTAAAATGGCCTTTGACTGGTTGATTGACCGCTACGATGAATTCGAGACCAGGAGTATTGAAAGGATTATGCGGAAAATAGATGCAAACAGGAGGGACAGAAACACAGGGGTTTCGGTCGCATCAAGGAGCATTCTCACAGAACCTAAATCAGATGGCATGTAATGATGTTGAAGCACTCAGGAGAACCCGTGGTAAAGTCCAGGTGCAAGCTGTGTCCTGCCTTTTTGGTCAGATAGATTCGGAAGGCAGATTTGAACTTAGAATCTAGTCCCTTTTTTTCCGTTACTTTGATATCCTTTCGTACAATACTGATAACGATAGATGATTCATGGAAATTGATAGGTAGAGATGTTAGTGATTGCCTCCATATTCAGGACTCGTAGTTTAAGCTTGAGTAATTTCATGGTTTGGATCAGCTTGTGTCCATAACTGCTAAATGAACCTTCGATGTGTTTTAGAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAA | |||||||||