| mature miRNA: TGCCTGGCTCCCTGAATGCCA species: Sorghum bicolor database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|30164380|gb|CB928109.1|CB928109 ABA1_36_D07.g1_A012 Abscisic acid-treated seedlings Sorghum bicolor cDNA clone ABA1_36_D07_A0 TGCCTGGCTCCCTGAATGCCA EST sequence (targeted fragment marked with yellow): CTGTTTCACTTTCCCCAACTCTGTTTTACTTTCCCCTCGCCTTCGTGTCTGCTCCGCTCAGATTTCCGAGGCTCTTCCTGCCCCCTCCGTTTCTACTAGAAGCTTCGCGTGGATTTGGATTCATGGAGCCAGGCATCCGTCGATCTGCGCGTGGAGCAGCTGATTTTGATCTATCCTCGGAGCAACTATTCATCAGAAGAAGGTACTCGGCCGATCCGATCCACCGGATCGGCCGCCAAACCGCATATCTCCACGGTGGTGCAAGGGAAAACCGGGGCAACACGATGTTCTGCTGCGGTGGTACCGAGGAGGATACGTACGCCGCACCTGCGAGCCGTCACCCAGCAGCACCTAGGAATACGTCGCAACACAACGCAGGCCGCGGCAAACCAAGAGGGCCCAATGCGCCGAGGAGCAGCGGGCCGCCGAAGGTCCTCCCCGTCGATGTGCCGGCCATTTCCATGGGCGAGCTGAACAACATCACGGGGAGCTTCGGGCCGAATGCCCTGATCGGGGAAGGCTCCTACGGCAAAATCTACCGCGCCGTGCTGACCTCCGGGGAGCCCGTCGCCATCAAGAAGCTCGAT | |||||||||
gi|30963790|gb|CD220356.1|CD220356 CCC1_66_G04.g1_A007 Callus culture/cell suspension Sorghum bicolor cDNA clone CCC1_66_G04_A00 TGCCTGGCTCCCTGAATGCCA EST sequence (targeted fragment marked with yellow): TGTCGGCCTTCTTGAGGATGAGGAGAGTAAGATGATCAAGGGTCCTGGTGGGTACATGAGAGGCAGGGGGAAGGTCAAGATCACGGATGTTGTTGAGGCCGCAAGCCTTGCGGCCAGCGGCCAACCATTTGAGGTGGTGTACTACCCGAGAGCTAGCACACCGGAGTTTGTTGTCAAGGCAGCATCGGTGCAGAACGCGATGAGGAACCAGTGGTGCCCTGGGATGAGGTTCAAGATGGCATTTGAGACAGAGGATTCATCAAGGATCAGCTGGTTTATGGGGACCATAGCTTCTGCTCAGGTTGCCGACCCAATCAGATGGCCAAATTCACCGTGGAGGCTTCTTCAGGTGACATGGGATGAACCTGACTTGCTGCAGAATGTGAAATGTGTCAATCCATGGCTTGTGGAGATTGTATCAAGCATTCCACCCATTCACCTGGGACCATTTTCTCCACCTAGAAAGAAGTTGCGGATGCCCCAACATCCAGACTTTCCATTTGACGGTCAGCTGTTGAATCCAATTTTCCACGGCAACCCACTTGGTCCAAGCAACAGCGCTCTTCGCTGTTTCTCGGACATTGCTCCTGCAGGCATACAGGGAGCCTGGCATGCTCAATTTGGTTTACCCCTAACAGACCACCAGCTTAGCAAGCTGCACCT | |||||||||