| mature miRNA: TGCCTGGCTCCCTGCATGCC species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|89196687|gb|CI400857.1|CI400857 CI400857 Oryza sativa (japonica cultivar-group) callus 2ppm ABA(abcisic acid) Oryza sativa Ja TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CTTTATTTCGAAACCCATGCGGATTGGACTGGATTTATTCATAATTCGGATTTCAACTGGTACACTGGGCCGGCAAAAAATTACCCAATATTGGCAACACTGGTATGAATGCAAATTAACACAAGCCTAAAAACGGCACCTCCCCCCNGTTAACAAGAAGGCTAAAATGGCAAAAGAAAAGTTAAATTCAAATTCGCTTGGGAAGTTCAATTTTCCAGAATGTTCAATGGCAAGCCTTTAATGTTGGTGAATTCAATTCAAAGCCATTCAGCCCTTGGGGCCGGGAAGCCTGCCTTCTGGAAGCCAAGCAGGGAGCCAGGGAGGGAAGCAAGCCAAGCAGCCAGCCGATTGGCCACGGTGCCCTTCTGCCNNNGCGGTGGGTGGGTGGGGTGGGAGCCCAGCTTCAGCCTTCAGCCTTCAGCCTTCTGCTGGGTTGCCGGAGCAGGAGCAGGAGCAGCT | |||||||||
gi|41882789|gb|BX928093.1|BX928093 BX928093 Oryza sativa library (Han B) Oryza sativa cDNA clone y619f08p5, mRNA sequence TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): GGAATTCGGCCATTATGGCCGGGGGAGGGGCGGCGGCCAGGGGCAAGGTCAGAGCCCGTGTCCGGCCAGAGGAGGTCGTCGAGGCGGCAATCTCGCCGTGAGCGGGCAACCATTCGAGGTCGTCTACTACCCGAGGGCGAGCACGCCGGAGTTCTGCGTGAAGGCCGGGGCGGTCAGAGCGGCGATGCGGACGCAGTGGTTCGCCGGCATGAGGTTCAAGATGGCATTCGAGACGGAGGACTCATCAAGGATCAGCTGGTTCATGGGCACTGTATCGGCCGTGCAGGTTGCTGACCCCATTAGATGGCCTAATTCACCATGGAGGCTTCTTCAGGTTTCATGGGATGAACCGGACTTGTTACAGAATGTGAAGAGGGTGAGCCCATGGTTGGTTGAGCTTGTGTCAAACATGCCGGNCATCCACCTTGCTCCATTCTCGCCTCCACGGAAGAAGCTTTGCGTGCCGTTGTACCCCGAGCTTCCCATCGACGGCCAATTTCCGACACCGATGTTCCATGGAAACCCGCTCGCCCGTGGGGTTGGTCCTATGTGCTATTTCCCGGATGGCACTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTATATCTTTATCAGAATCTCAACTTAAGAAACTGCAGGCGAGTCTATCGGCCCAGGGGGTTTACAGATTGATCAGGGATGGAGCGAAGATTGAGATGGGTAATACGGGAAACGGGGGCGGGGAGAATTAAGGAGAGAG | |||||||||
gi|58664663|gb|CK053349.1|CK053349 60381rsicek_3172.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TCGGCACGAGGTGCACATCTCCAAAGCTCTCTTCTCACCAAACAGACATGTAGTACGAACGCCATTGTTCATCTTGTACTACTTTCTGTGTGTGTGTAGTTGTGTACTGTCTCTTCTTCTTCTTCTTCTTCTTCTTGTTTCTCCAGCTGCCATCTCCATCACAATGTCATGCCAGCTGAGCTCTTGGCTTTGGTGGAGTAGTAGTAGTTGTGTTGATGTACATATATAGGAGTTGTTGTTGTCTTCTCTTCTCTTCTCCAAGTGTTCTGGGCTTTGAGTCTAGCATTGGGGTGTGTGTGTGAGATGAGCACTGCAGTGTTGAAAGAAGGGAATGCATGGCATATTGGCAAGGATGCAGAAGGTTTGGAAGCTGAAAAGCAAAAGAGAGGGGAAAAAAAGGGGATATGCCTGGCTCCCTGTATGCCACTCGCGTAGCTGCCAAACTCAGTTGAAACAACTGCCTTCTCCCGGCGAGATTCAGGCATTGTGTTCGTACGTTTGGCTCTACTGCGGATGGCGTGCGAGGAGCCAAGCATGACCGTCTCTCTCTGTCTCTATCTCTCTCTCATTGACTCATTGTGTGTGCTCACTTAAGATTACACGCT | |||||||||
gi|88841748|gb|CI081004.1|CI081004 CI081004 Oryza sativa (japonica cultivar-group) ABA: Abscic Acid treated callus Oryza sativa TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): AGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTAGCAGCACGCGCGATCTTGAGCCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCCTGGGGTGCTGACGCCCTTGTTGATGGCAAGGCAGACCACCCTGCGCCATGCCGCTTGCCTGTCC | |||||||||
gi|86485350|gb|CI127983.1|CI127983 CI127983 Oryza sativa (japonica cultivar-group) Panicles more than 5cm stage and Panicles one TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACACCAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTAGCAGCACGCGCGATCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAAGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCCTGGGGTGCTGACGCCATTGTTGA | |||||||||
gi|117251477|gb|CT844182.1|CT844182 CT844182 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CTCCCCTCCGTCTGCAGGGAGCCAGACACACGGGGTCGCGCCCTCACGTGCCTCGCGCCGTGCGGCCCCCATCGCCGTCCTCATCCTGATCCTAATCCCAAGCGACCGCGGCGCGATCACGCGGCGACCAAACATCTCTCGTCGACGAGACGACGTGCCCGCCGCTCGCCACCCCCCCCCCCCCCCCCACCCGCTCGCGTCGGCATAAATACAGCACGCCACGCCCATCCCTCTCACTCTCACCAACAACAGTAACCCAACCGGAGAGCTTGCGGAAGCGGCGGTTGGGTGCGGGCGCGCGCGTGTGAGGGGGGAGAGAAGGCCAGGAGGAGGCGACGCCGTCGCCCGAGGGAGGCAAAAATCCGATCCTCCTCCTGCCCTGCTCGCTCGCTCGCTCGCCTGCGCTGCGCGCACTTGGCCCCGTCCCGTCCGTTCCCGCTCGCCAGGCATAGAAAGATGGTGCTCTGGGTCTTCGGCTATGGCTCCCTGATCTGGAACCCCGGATTCGACTTCGATGAGAAGATCCTGGGCTTCGTCAAGGGCTACAAACGCACCTTCAATCTTGCTTGCATTGACCATCGGGGCACGCCGGAGCATCCTGCGAGGACCTGCACACTTGAGTCCGACGAGGAAGCCATATGCTGGGGGATTGCATACTGTGTCAAAGGGGGGCTTAAAAAGGAGCAAGAAGCAATGAAGTACTTGGAAAGAAGAGAGTGTGAGTATGACCAGAAGATCTCTGTGGATTTCTACAAGGAAGGAGATTCTTTGAAGCCAGCTGTGACAGGTGTACTAGTCTTTGTATCCACTCCTGATCCAGTAGGCAACAAATACTATCTTGGGCCTGCTCCTTTGGAGGACATGGCAAGGCAAATTGCTACAGCCAATGGCCCCAATGGGAATAACAGGGATTACCTGTTCTCAATGGAGAAGGCATTGTCCAACATATGCCATGAAGATGATTCAATCATCGAGCTAGCTAACGAGGTCAGGAAGGTGTTGAGCCGGCCGAAGGAAAAGATCACTGGCTCCGATAGCCCACAAAAATCTCACGCTCTCGTACACCTGTCTGCGCTTCCTGAGGGCACTGTGTGGACTCAAGATAGCAAGCTCGGCGGTGGAAGAGATGAGATCTCCTCTGACCTACTCACTCTTGACGCTGGATTGAACGAGTTTAACGGTTCTGCTTCGAGCTCCCTGGCACACTGGGGGACCAGAAATGGGCTGATTTTTCTTTCCAACCCGCTGGCGGAATGCTGTAACCTTTAATTTTTGGTTATACTAGAAACCCAAGACTGGGGGTGGTTGCTTGGTTTCCTTTTTCCCCCCTATAATAATTAAAAGGGATTACACTGAAGCCTTTTTTAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|86604084|gb|CI114858.1|CI114858 CI114858 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): AAAAAAGCAAGCATGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATATCACATCTTAGCAGAACGCGCGATCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCG | |||||||||
gi|88405850|gb|CI591245.1|CI591245 CI591245 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TGCCTGGCTCCCTGC-ATGCC EST sequence (targeted fragment marked with yellow): GATCTACCTCCTCCAACGAAGCCTTCCTTCGCCCTTGTCGTCCAACCCTCCTCTCCTCCCCTCCTCGTCGCGGGGCTAGGGTTACGCCCCCTCCTCCTCCTCCTCCTCCTCCTCCTCGTGTGGGGGCATGGCAGGGAGCGAGGCGGCGGCGGAGCAGGAGGCGGAGATGGACCCGGACTTCTCGGGCGGGGGCGGTGGGGGCCCCAGCTTCGAGTTCGCCTTCAACTCGGTCAACTTCTCCGACCGGGTGCTCCGGATCGAGGTCGTCGCGGGGGACGACGACGACGACGACCACCACGCGCCCGGCTCCAGCCGGGACGGCGGGGCCGGCTCCTCTCGGATTGGGCGCGCCAGCGCAAGCGCCGCCCCGATGAGCTACTCAAGGAGAAAGAGTCTGAAGGAGTGATG | |||||||||
gi|163918270|gb|EG713184.1|EG713184 Os6CPREST1111 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-E4E01S, mRNA seq TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CGGCCGGGGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTCAATTTATTTGTAGACGCTCAAGATTACTTGCAGATCTGTCAGAAGTAATACTGCCACAATGAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTATCAGCATTGTAACTAGCTATACAGGAT | |||||||||
gi|33803323|gb|CF327535.1|CF327535 NACL--02-B01.g1 Rice callus plasmid cDNA library (NACL) Oryza sativa Japonica Group cDNA clon TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTGATCCATGTTTATCAGGTTTAATTAAGCGTGTAATCTTAAGTGAGCACACACAATGAGTCAATGAGAGAGAGATAGAGACAGAGAGAGACGGTCATGCTTGGCTCCTCGCACGCCATCCGCAGTAGAGCCAAACGTACGAACACAATGCCTGAATCTCGCCGGGAGAAGGCAGTTGTTTCAACTGAGTTTGGCAGCTACGCGAGTGGCATACAGGGAGCCAGGCATATCCCCTTTTTTTCACCTCTCTTTTGCTTTTCAGCTTCCAAACCTTCTGCATCCTTGCCAATATGCCATGTATTCCCTTCTTTCAACACTGCAGTGCTCATCTCACACACACACCCCAATGCTAGACTCAAAGCCCAGAACACTTGGAGAAGAGAAGAGAAGACAACAACAACTCCTATATATGTACATCAACACAACTACTACTACTCCACCAAAGCCAAGAGCTCAGCTGGCATGACATTGTGATGGAGATGGCAGCTGGAGAAACAAGAAGAAGAAGAAGAAGAAGAAGAG | |||||||||
gi|88273443|gb|CI393849.1|CI393849 CI393849 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): AAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTCAGCAGCACGCGCGATCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTTTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCCTGGGGTGCTGACGCCATTGTTGATGGCAAGGCAGACCACCCTGCGCCATGCCGCTTGCCTGTCC | |||||||||
gi|218502476|gb|FG960215.1|FG960215 MA_PA64s_08026 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TAGGTTTCGATCTCGCCCCCGGACGGCTTCCCCATCCCTTCACTCCTCCTCCCTCCGCGCGAAGGCTCGCCATGGAGGGAGCCAGGCGCCAGCCCGCAAGAGATCCCGGCCGGACACGGCCAACGGAGGCGCCGCCGGAGGGAAGCGCTCGAGAGAAACGGAGTCATTTCAAACTGGTCTATCAAGCAAATTGAAGCCTTGCACCAAGTTTATCAGCACTATCGGATGCCCTTTTGGCGAGGGTTGTCATTTCTCGCACTTTGTCCCTGGTGGGTATCAAGCAGATAGCAAAAACACTCAATCTAGGCAACCCAGCTGTGCCTGCACCGGCAAGAGCTCCTATGGATCATGCTGCTGGTGGTAATTCTCATCCAGCTTCTTCTGGCAAGACACGCATGTGCACCAAGTATAACACTGCAGAAGGCTGCAAATTTGGTGACAAGTGCCATTTCGCCCATGGTGAGAGGGAACTTGGCAAGCCAGCTTACATGTCCCATGAGAGTGCCATGGCTCCTCCTATGGGTGGTCGATATGGAGGCCG | |||||||||
gi|33681081|gb|CF309320.1|CF309320 ABF--03-H13.b1 ABF3-overexpressing transgenic rice plasmid cDNA library (ABF) Oryza sativa Ja TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTCTTTCTCTCTCCTCCTCTACTTCTTCCTCCCGTCACCTCCTCCTCTTCAATTAGGAGCCGAGAGAGAGAGAGGGAGAGAAAAGGGCGAGCGGGGAGCCGGGCTTCCAGTGGCCAAAGTGCGGTGACGTCGGCGGCATATTGTGTTCCCGGTCGACGCGCACTCGGGGAGGTTGGTGGCTGGTAGAGAGGAAGGTTGAAACGGCCGGAACGGCGACAATACGAGCTCAGTTTCGGCCGGTAAAAGAGGCGGCGGCGGTGGCTTATCTCGGAGGGGAAAAGGAAGGGGCAAGTAGGGGAATAGATTTGCCTCATCGAGACGAAGGTAGTGGCGCGAGGGCTTGGCCTGCAGGGCTCCAGTGAAGGAGATCGACCAGCGGCCGGCATTGGGGAAGAGAGAGAAAGATAGAGCTCGAGGCTCGGATGTGTATTTTCTACTCCTTTAGTCCATGTCAGTGTCC | |||||||||
gi|66913384|gb|CX100232.1|CX100232 RECm1074 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TCCCGGGTGACCAGGTACACACACGTAGAGATCGAGGGATCGAGGCCTCTTCCGTTCGCTCCGCCTCTCACCGTCGTCCTCGCCGCGATGCTCTGCTGGGCGTCCTACACCCTGTCGATCTGGCACAACAGCCGCGGCGCCGCGGACAGCAGCGTGCTCGGCCTCGTCGTCGGCGCCCGTGCGCGCCGCCGTCGACGTCGGGGCCATGCATGGAGGGAGCTGGGCGGCGGAGCTGATGTCCCGCGGCGTGGTCACAGTGTCCGTGGCGGCGCCATGGGGCGCGTCCGATGGCGCGGCGCTCGTCGAGCTCGCGCTGGAGAGAGGCGTCCCGGCCGTGCTCGCCGCCGCGGGGGGCGCGCCCAGCCGCCGGCTCCCGTTCCCGGCCGGCGCGTTCGACATGGCGCACTGCGGTCGCTGCCTCGTGCCGTGGCATCTTCATGGCGGGCGGTTCTTGATGGAGATCGACCGCGTGCTCCGGCCAGGCGGCTACTGGGTCCACTCCGGCGCGCCGGCGAACGGCACGCATGAGCGCGCCGCCATCGAGGCCGGCGCGGCGAGCATGTGCTGG | |||||||||
gi|66926772|gb|CX113620.1|CX113620 EI083A10 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CACAGCTGCTCTGTGTGCCACTGATTGGCTGGCCAGCGTGGTGCTGGCCACTGATTGTGCTTGCCAGCAGCTTGTGCGTGCCAGCGGTTGGCTCTATCCATCCGTCGTCCGTCGCGCTCACTCACACGCGTCCATCATACTCAACACAGCAAGCCAGCAACTCAGCAGCACACACACACATCACGCACTGCATTCGTCTATCGTCCGACACCCAACTGCCCTGGTGTTCAATCCTGGCATGGTGCTCCAACCTGCATCTGGCACAGGTGTGCTGTGGTGCATCTGTGCTGTGTGATGTGCGTGCACGTGGCAGGCAGGGAGCCATGCGATCGCAATTGCCCGTCTGACCTCCCCACCGCCCTGCCCCCAATGTTATGGCTGCGCAGCTGTGATGCGTCAACTGGACTCGCCCCGAGAGATCGTCCTCGTGCTGAACAGACTCTGCCGGAAACATCCTGGGTATACCAGTACAAAGCAAGACCAGGGAGTGCCAGTGGATACATATGTTTGGCATGGGTACTCGTTCAAACCACAAATACAACCATGATCAACAAAAGCAGAACACCATGGGTGGACGAGGTTAAGTACGGTATTAAATGCTATCGACGGAACAGTACAACACAGGCTATCACAGATAAACAAATCATTAGAAGACATGATGAGACAGTATGTGAAACTTATACAGATCAGAGCGCAAGCTGCGCAAGGTCAGGAGACAGCCACAGAAGGCAGAGGGAAGCAGAAATGGTGATGTGTGCTATGCAAGGGAATGGAATTAGTAATAGAGTAAGAATAACTGTACGGTTATG | |||||||||
gi|89195680|gb|CI393709.1|CI393709 CI393709 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): GAGGGGTAAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTAGCAGCACGCGCGATCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCCTGGGGTGCTGACGCCATTGTTGATGGCAGGGAAAACACCC | |||||||||
gi|89166634|gb|CI103920.1|CI103920 CI103920 Oryza sativa (japonica cultivar-group) Panicles one day after flowering Oryza sativa TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGGTAAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTAGCAGCACGCGCGATCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTTTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCCTGGGGTGCTGACGCCATTGTTGATGGCAAGGCAGACCAC | |||||||||
gi|29625906|gb|CB630917.1|CB630917 OSIIEb08C08.r OSIIEb Oryza sativa Indica Group cDNA clone OSIIEb08C08 3', mRNA sequence TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CAGACATTGACGATTGGAAGAATCGCACGGACGAAACGGATTGACGGACGAGAAATCTTAATCTTAACTAATAATAATAATTATTAATAATTATTAAAAGATTGATATTTTTCCAATCGTCACCCAAAAATTATCGTCCGTAAATCCGAGTGGCATCCTCCGTCCCGCACACATGTGTTCATTGCGTCGCCAAACAAAAAAAAACAGAGACAGATTCAAAATCCTTCGCGTAAATAACAAATTTTCCCGTTCGTCACACAGAAATTTTCGTCCGTCCTCCAAATTTTGACCGATTCAGTGCGCATGCTTTCTGCACGACTTGTAGGAGTCCGCATCAAATACAAATAATCCAAAAAAAAAAACAAAATTGAACAAATCGATTTTTAATAGAGGCAAACAAAAACAAAATTGAACAAAGACAGGCAGGGAGGATACCAGATTCAACAGGAAAGGAAGTTGGATGCGGATTCGATGTGAACTCAAAATCGAATAAAATTAACCCCATAAATACACGAAAGAGTTACTGCAAGCAATCGAACAAGTCACGGAGCAATTGGTGATATCTGACCTGATTTCACGGAGGCGGGTTTAATTCATCTCCCCATAGATGGGACAGGTCGTAGGCGGCGGTTGGTTCGTGAGGAGGTGGAGGGGGTTCGGTGGGCCTCCGGCGAGGAGGCGGCGGCAGGGCTCCGCCTCCGATGGGGCGGAGGCCATGAGGACGTGGCGGCCCTCAACGGCGAGCTCCTGGATGTTGGGGTGTCGAGGGAGCCAGGCAATGATTCCTGGAGGATGGCGCATTAGGAGGGGGGGCCCGGTACCCAGCTTTGTC | |||||||||
gi|44673103|gb|CR286537.1|CR286537 CR286537 Oryza sativa library (Han B) Oryza sativa cDNA clone y809d09p5, mRNA sequence TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TTGGAGTGGCATGTCGGGGTGAACGCGCCGGGCTATGGCGGCGGGGTTCTCGGCGTTCTGAAGGAGGAGGAGAGTAAGCTGATGAAGGGCCATGGTGGTGGTGGGTACATGAAGGGCAAGGGGAAGGTGAGGATGGCCGATGTCGTGGAGGCCGCTAGCCTCGCGTCGAGCGGGCAGCCGTTCGAGGTGGCGTACTACCCGAGGGCTAGCACCCCGGAGTTTGTCGTGAAGGCCGCGTCGGTGCAGGGCGCAATGAGGATCCAGTGGTGCTCCGGGGATGAGGTTCAAGATGGGTTTCGAGACAGAGGATTCATCAAGGATTAGCTGGTTTATGGGGACAATATCTTCTGTTCAGGTTGCTGATCCCAACAGATGGCCGAATTCGCCGTGGAGACTTCTTCAGGTGACATGGGATGAACCGGACCTGTTGCAGAATGTGAAATGTGTCAGCCCATGGCTTGTGGAGCTTGTGTCAAGTATTCCACCAATCCATTTAGGACCATTTTCGTCACCTCGAAAGAAGTTGCGGGTTCCCCCACATCCTGACTTCCCATTTGAGGGTCATCTTCTGAACCCAATTTTCCATGGGAACCCACTTGGTCCTAGCAACAGCCCACTATGCTGTTACCCGGACAACGCTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTTTACAATAACAGAACACAGCTTAACAGCTGCCCTTGGTCTGTACATAG | |||||||||
gi|88408240|gb|CI551369.1|CI551369 CI551369 Oryza sativa (japonica cultivar-group) 2 weeks seedlings root of seedling UVC irradi TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): AAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCACCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTACCAGCACGCGCGATCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCC | |||||||||
gi|88992102|gb|CI035240.1|CI035240 CI035240 Oryza sativa (japonica cultivar-group) etiolated shoot Oryza sativa Japonica Group c TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TTTCAAGCACGAGACGAANGCGTCTTACANATAGACCACATGCTACACGTAGAGATACAGGCAACTCTCACGTTCACACGGGACACGTTGCCTTCTGCTCGTATAACACAGAAAAGGAAGTCGACAGTGATTCCACTCTACACTAGACAACCTCAGCGTCCGTCCTCTTGTTCGTTGTCGACCTTTTCCAGAGCTAGACGGAGTTGGTGGAGACGTGGGGGTCAGCGCTTAAGCAGATGCAGGCTTGGGAGTCGCCACTGGCTCGGCGGCAGTCTTGGCGGGCTCGGCGTTCGTCGCGTCGCTCTCAGAATCGGGATAGCCAATGTTCGTGGGCGCGCCGGGAGCTAGGTACTCGGGCAACGGCGGGTTCGGCGCCACCAACGGGCCCGAGATCGGAACTAGGTATGGAGCCGGGCTCTGCTCGGCGTTCGTCGCGTCGCTCTCAGAATCGGGATAGCCAATGTTCGTGGGCGCGCCGGGAGCTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCTTTTAGAGCAGAAGTAACACTTCCGTACAGGCCTAGAAGTAAAGGCGACATCCACTGAGGAGCAGTTCTT | |||||||||
gi|87030770|gb|CI361984.1|CI361984 CI361984 Oryza sativa (japonica cultivar-group) flower Oryza sativa Japonica Group cDNA clone TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): GAGGGGTAAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGGTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTAGCAGCACGCGCGATTTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGAAATGCCTGC | |||||||||
gi|117210622|gb|CT863588.1|CT863588 CT863588 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): GCATGCAGGCAGGCATCTTGTCTTATTGCTTTTCTTCTCGCTACCCCCCCCCCCCCTCTCTCTCTCTCTTGCCTTTCGCACCATTGCCAGCAGCAACTAGCTACTACTGCAGCCTGCAGGCCCCTCCTCCTCTTGCTGCTGTGCTGCCTTGAGCGTTTATTGCGTGAATGCTCTTTCTGTTGCTGCAATTCATTTCATAGCCCATATGATGATCTCTGCTCCTCCAACCTAGCTGTGTATAACTCCCATAGAATCAGCAGCTAGCCCACATGTTTAGATCAGCTGTTGCAGTGAGCCAGTGAGTAAGTAGTGCTATCACTCTCACCATCTCGATCCATCGATCAACCCAACTAAAGAGTAACGAGAGCTACGACGACCGTGTGGATGGATCGTGGCTTCAACGAGATGATCTTGAGCGAGAGCGTGTGGAATGGCGGCGGCGGCCGAGGCCGCGGAAATGGAGATGGGGGGGCGGTGGTGCTGCCCCCCGAAGTGGGTGGTGTCAATGCCGTGGACGGGAGCGGCATGACGATGCTGGAAAAGCTGGGGGTCCACCAAGCCCTGGGGGCCGCAAAATTTAAGATTGAAGGGAACCCAAGCCCCCGGGGTGCCGGCGGGCGGCAGGTTGGAAAAAGGGGAGGAGGGGGGCCCCCCCCCCCAAAAAGCCGGGAGAAACACCGGGCCTCCAAAAACCCGGGGGGGGGCCCCCCTTTCCCCAGCCAAAAAGGGCAAACAGGGGGATACCCCCCCCCCCTTAATCTTAAAAAACATTTAAACCCCCGAAAATGTTTCTTGGTGAACTCAAAAAGGAGGGGGAAAATAACATACCCACATCTCCCCCACACAACAAAAAAAGGGCCGCGCAAATAAGGGGGGGGAAATATGGGTTGTTTTGCGCCAAAAAAATATAAAAAAAAAAACCCTCCCCCCCCCACAAAACAAAAACCAAACCCCGGGGCGCGGGTTTCCTCACTCTGGTTTGAAGGTAGGGGGGGCTTTGTTGTTTTTTTACCACACCACAAACACCACACCCACCCCACACCCCACCACCACCACAACCACCCAAAGAAGTATTTGATTTTTCTGCTATAAAACACAACAACCCAACACCCACCCCACCCACCCCCCCCCCCCCCCTCCCCCCCTCCCTCATCCTTGTTTTTTTATTATTTTATATAAGTGAGGGCAGACGGTGGGGTGGGGTGGAGGGCGCGGCTGCGGGGAGCCGGGCAGCCGCCTCCCCCAACTATACAGTTCAAGAAGGTTGTAGGATGATATAGAAAGAGAAGACAAAGAGAGAGAGACAAAGACAGGATAGA | |||||||||
gi|88460187|gb|CI529262.1|CI529262 CI529262 Oryza sativa (japonica cultivar-group) after pollination embryo Oryza sativa Japonic TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCAAATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTAGAAGCGACTCAGCAGCAAGCAGNAAGCAAATATTACCGAAAATTTGAAGCATTTCAGATCTTAGCAGCACGCGCGATCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGNCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTACCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCCTGGGGTGCTGACGCCATTGTTGATGGCAAGGCAGACCACCCT | |||||||||
gi|88349918|gb|CI634453.1|CI634453 CI634453 Oryza sativa (japonica cultivar-group) leaf of seedling 50ppm CuSO4 for 3 days Oryza TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): ATCACCACATCATTTCTCTCTCTCTCTCTAGTTCTTCCTAGCTATCTCTCTCTCTCTCTAGATCTTGTCGTCCTCGTCAACAATCCATGGAGAAATTGTGTAGTAGTAGTTCAGGAGATGGTGATTGTTCATATTGCAACATGTATTGTGGTAGCAAATCCATGCATAAGCAATGGCATTGACATGCATGGAGATATATGTGTAGCAAAGATGAGAGATCTAGGTGACAAGAGAAGGAGATGATGGAGATCAATGCATGGATAATTGATCTAAAGCAAAGGTGATGATATTGGGAATGTGCCTGGCTCCCTGTATGCCACTCATCTAGAGCAACAAACTTCTGCGAGAGGTTGCCTATGATGGATGGNGTGCACGGAGCCAAGCATATTCCCTCCTATTTTCCAACCTTCTCCT | |||||||||
gi|89174387|gb|CI110585.1|CI110585 CI110585 Oryza sativa (japonica cultivar-group) Panicles two weeks after flowering Oryza sati TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): AAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCCTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTAGCAGCACGCGCGATCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTNTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCCTGGGGTGCTGACGCCATTGTTGATGGCAAGGCAGACCACCCTGCGCCATGCCGCTTGCCTGTCCATGATCTCCTGAGCGAACTCAGGGTCCACGAGCAGGTTGGCGAGGTCGGAGTTCCTGTC | |||||||||
gi|29680154|gb|CB676429.1|CB676429 OSJNEe12K23.f OSJNEe Oryza sativa Japonica Group cDNA clone OSJNEe12K23 5', mRNA sequence TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CCAAAGTCCAAGCTGACCAGGTACACACACGTAGAGATTGAGGGATCGAGGCCTCTTCCGTTCGCTCCGCCTCTCGCCGTCGCCGGCGGCGATGCCGAACGCCGGCGCCGCCAGGAGGTGCGGCAGGGCCACGCACGTCGACCTGCTCACCGTCGTCCTCGCCGCGATGCTCTGCTGGGCGTCCTACACCCTGTCGATCTGGCACAACAGCCGCGGCGCCGCGGACAGCAGCGTGCTCGGCCTCGTCGTCGGCGCCACGGTCTGCGGCGACGCCGACGAGGAGCTCGACTTCGAGGCGCGCCACGCCGCCGACGACGCCGGCCTGTCCGTGTCCTCGGGCCCGGCGAACTCGAGAGTGCGGCGGGCGTTGAGCTCGTCGGGGCCAGCGCCCGCCGCGGCGGGGACGACGGTGAGCCGGTACCGCGCCCCGTTCCCGTGGCCGGCGAGCCGCGGCGTGGTTTGGGCGGGGAACTCGGCCCGCGGCGCCAAGGCCGCCGCCGACGCCGCCGCCGCCGCCAACAAGTGGGCGCGCGTCGACGGCGACATGCTCCGGTTCACCGACGCCGCCGCCGTCCGCGCGTACGCCTACGTCGTGCTCCGGCTAGTCGCCGCGCCCGTGCGCGCCGCCGTCGACGTCGGGGCCATGCATGGAGGGAGCTGGGCGGCGGAGCTGATGTCCCGCGGCGTGGTCACCGTGTCCGTGGCGGCGCCATGGGGCGCGTCCGAT | |||||||||
gi|58667037|gb|CK055723.1|CK055723 61088rsicek_4369.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica Gr TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): GCACGAGGGGAGGACTCATCAAGGATCAGCTGGTTCATGGGCACTGTATCGGCCGTGCAGGTTGCTGACCCCATTAGATGGCCTAATTCACCATGGAGGCTTCTTCAGGTTTCATGGGATGAACCGGACTTGTTACAGAATGTGAAGAGGGTGAGCCCATGGTTGGTTGAGCTTGTGTCAAACATGCCGGCCATCCACCTTGCTCCATTCTCGCCTCCACGGAAGAAGCTTTGCGTGCCGTTGTACCCCGAGCTTCCCATCGACGGCCAATTTCCGACACCGATGTTCCATGGAAACCCGCTCGCCCGTGGGGTTGGTCCTATGTGCTATTTCCCGGATGGCACTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTATATCTTTATCAGATCT | |||||||||
gi|86414016|gb|CI068223.1|CI068223 CI068223 Oryza sativa (japonica cultivar-group) BAP treated callus Oryza sativa Japonica Grou TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): AAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTAGCAGCACGCGCGATCTTGAACCATTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAG | |||||||||
gi|163927237|gb|EG715207.1|EG715207 Os6CPREST0075 6cm rice panicles Oryza sativa Japonica Group cDNA clone 6CPR-A1H09S, mRNA seq TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): ACGGCCGGGGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTCAATTTATTTGTAGACGCTCAAGATTACTTGCAGATCTGTCAGAAGTAATACTGCCACAATGAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTATCAGCATTGTAACTA | |||||||||
gi|58612059|gb|CK039771.1|CK039771 39833rsiceg_7544.y1 Oryza sativa cv. 93-11 tillering whole plant cDNA library Oryza sativa cD TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CAGCCTACAGGAGGCCTACAGCGGCAGCACCCACCAGGGCAGGCGGGGAGGCAGGCAGTCGTTCATCCACATCCACCGCCGCCGTCTCCCCCGCCGCTTCTCACCCATTCCTCTCCAATCCGGCCGCGCCGGCGCCGCATCTGGTCCACCAAGAACCCCTTCAAAGAATCCCCACAACCCTCTAGGGAAAGATCGCGAGAATTCCTCTCAATCGCCGCTTGGATGGGGTGCGGGCAGTCCAAGATCGACCAGGAGGAGGCGGTGTGCCGGTGCCGGGACCGGAGGAAGCTGATGGCCGACGCCGTCCAGGCGCGCAACGCCTTCGCCGCCGCCCACTCCGCCTACACCGTTCTCCTCAAAAGCACCGGCGGCGCGCTCTCTGACTTCGCCCAAGGCGAGACGCCCGACCTGGTGGCCTCTCACGCCCACCTCG | |||||||||
gi|66929943|gb|CX116791.1|CX116791 EI106C10 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CAACAGAGAGACAAAAGTAGTGGGCCAGATAGCAGGTCAGTGCGAGATATGAGAAACCCTGTGTCATGTAAACGACGAACGCGACACCCTGCTAGTCATTAACAATCTAGCAGGCTACTGACTGTACAGCACGGCCAGGCGACACCGCGTTGCATCANTGAATACACTAGGGGTGGTGAACAACAACGTAGCAGAGACCGCCAAGGACTGGGGACCAACCTTGCTGAACAATGCATATTAGCACACAAGACATACAGTACACTAAACCAGCCACAAAAACAAGATCAGAAACAAGCACAAGACAGATTACACAAACGAAAGGCAAACAGAGAAAGGAAAAGAAGTACAGAAGCGACGAACAAGTAAGAACAGCAACAATACTAGGGGCACACGTGGGACCAAGGCAAACAGGCCTATTATATATCGGATGAGCATATAGTTAATATCCCCATGGGGACAGATAGATAGACACAGACGAAGCGACGATGTAAGCGACGATGCAGAGAGCAGCAGGACTACCGCGACAGACTCGAAACAACAGACGATGCGAACGCGCCCGAGGTCGCGCGGAGAAGCCGGGGCGCGCGCGCGCAGAGCCGCGGCAGGCGAGCCAGGCAGCTGACGAAGCCGAGACAGCCCGACCAGCTAGGAGCGCAGAGCGCGGCGGACGCACCGGGACGAGCGGCCGCGGGGGCACGAGACAGGCGGCGGGCGCCGGCACCTCGAGCGCGCCAGCGGCAGCGGACGCGGACGGCGCACGCAGAGGGCGGCAACGAAGAGCGACGAGCCGGCGCAGCGCCAGGCAGGGCACGACACCGGGACACCACACGAGACGCAGCGATGACTAGAGAACAGCAGGAGCCGGAGGGACGGCGGAGCCCAGGCAACGAAACGCGCAGGAGCACGGCGGGGCGCAGCCGGCGGGGCAGCAGCACGGAAGACGACAGCGAGACAGTGAGACAGAGCACGACTAGGAGGCCGCGCGTCGAGGCACGAGCCGGCACCAGGGAGCCAGGCGCGGCGCGACGACGCAGCGGCAGGCGCGCAGACGACGAGAAGAAAAGCAGGAGCACGAGAGGAGGGACGAGACCAAGCGACCGCGTACGCAGCACGGCCGAAGCACGGGCCACGCCAGAGGCGGCGGGGAGAGCACCGAGCAGGCGAGCGAGGGGGGCGACC | |||||||||
gi|117246194|gb|CT848502.1|CT848502 CT848502 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): ATCCTCTCCCCTCACTCACTCACTCTCTCTCTTTCTTTCCTTAACTCTCTCTCTCCTCTCCACTCCTCCTCAGGCGGCGGTGGCGGGAGCTGGCGGCGCTCGGCAGCCTCGGGCTCTGGCCTGGAGCTGGCGGTGCCGGGGACGGCTCGGCCTGGAGCTAGCGGCGGCGGGGGCGACGCCACGGGCGGCCGTGCTTCCAGGCCAGTCGAGAAAGCCGTCACTACCTCACCCACACCCACTGTTCTTGGCCATAGCTGCCTACTCCCATGGTCTCCTCGTCCTTGCCCTTGTGCTCGATCGATCACCAGCCGAGCTGATTTTTCTCTTCTGCTTGATCTCTACCTCTGACATGCATCTGAAGACCGGAGAGCATCTGCATCTGCCTATATCATCCGGTCATGGATATGGATAGATGACCGGCCTGTTCATGTCTGAAGAAAAATCAAAGGTTTGGTTTTGATCGGCTTGAGAGCGTGCCTGGCTCCCTGCATGCCACTCATGTAGCCCAATCCATGGTGTGTTTGGATGCTGTGGGTGGCGTGCAAGGAGCCAAGCATGCGTGCCATGATCTCTCTTTCTGCCTTAATTCAGTTTCAGACATGTGTAGTTGGATTTGTTTCCTCTAGGTGTTCATGTTAATTACATATTTCATGTTGATTTTGCCCGTTTGGATATGTGTTTGTCTGCTTGGTTTCGAATTGTTTTAGCAGGGGGGCAGAACTAATCAAGGATACTGCAAATCGTTGGAATTAATTTCTTGTTCAATCTTGATCCAGATAACTATGAGAGCTTTTAATCACAACGAGAAAAGCTAAAACCAAAATGCGGGACTGATGATCAGCATGGAGAGCAGCCTCAATTTATTTGTAGACGCTCAAGATCTGTCAGAAGTAATACTGCCACAATGAGGATGTTTTATGGTTATATAGGCTAAAATATATATGAGTAATATTCCATGCATGTCTATCAGCATTGTAACTAGCTATACAGGATAAAAATTCACAAAAATTCATACAGAATCTCTCTTCGATATATCCCCTACTAGCAGATAGCTGAACCCTGAATAGAGCTTTGCAAGGTTGCAGTTAGCAGGTACAAGGCTCTGAAAGGAAAAAAACGAATCCTTTCCAAAAATGCATTTGCCTGATAAATATGACACAAGGACACAGTTTTGGGAGGCGCCGGTAAAAAGTGGTCACTTTTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|38479724|gb|CF963813.1|CF963813 7390rsiced_10516.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indic TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): GGCCAAGAAATGGTTCAGAACTGCATGGCTCAAGACCTATCTTGGAAGGGACCTGCAAAGAAGTGGGAGGAGGTTCTTCTTGGGTTGGGGCTTGAGGGGAGCCAGCCAGGCATCGAGGGTGAGGAGCTGGCGCCACTTGCCAAGGAAAACGTGGCCACTCCCTGAAATTCTCCATGACGGTGCCTAGCTTGCTGGCTTGTTTAGGTGACAGGCAGCCTGATAGGATCCCATGGACGGCTGAGCTCGCCACCGGCAAAGCCACTATTTGTATCCCTGCAGGCTTCTGCCATTTCTCTCGTCTACTTCACGTGTAATATAATCGCAGATGTTACTTAGAGATGATGGGCCAGATGGCATGCATTTGCCTGTTTCTCTCTCGCTCCTTCTGCATGTGTAATAGTATATTTGGCTGTGAAGTTCTGGACCCTGTCAGTCGCTGTCTAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|88215359|gb|CI215208.1|CI215208 CI215208 Oryza sativa (japonica cultivar-group) Panicles mixture of one, two, three weeks aft TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TTTTTTTGAATAAATTAAGAAAACTCAAATAAAATATTAAAATGGAAAATTTAGTGTCAAAAGGTAGGATTTGAATTTAGATAAATTTAGGTCCAAGTTTCATTGGAATCGGATCTACGGTTTAGGAGATATGTGCTTCTAAAGATTGGAATTTGAATTAAATCTAGAAAATGTGAAATAGTACTGTACTGGGGCCCACCTGTCAGCCTTTCTTTTATTTTTCTTTTCTTTCTCTCTCCTCCTCTACTTCTTCCTCCCGTCACCTCCTCCTCTTCAATTAGGAGCCGAGAGAGAGAGAGAGGGAGAGAAAAGGGCGAGCGGGGAGCCGGGCTTCCAGTGGCCAAAGTGCGGTGACGTCGGCGGCATATTGTGTTCCCGGTCGACGCGCACTCGGGGAGGTTGGTGGCTGGTAGAGAGGAAGGTTGAAACGGCCGGAACGGCGACAATACGAGCTCAG | |||||||||
gi|88289673|gb|CI522806.1|CI522806 CI522806 Oryza sativa (japonica cultivar-group) 5 days after pollination pistil Oryza sativa TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): GGGTAAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTNACATCTTAGCAGCACGCGCGACCTTGAACCACTCGGTGTGGAAGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTANGCGAGACTCGCCGACATGC | |||||||||
gi|88246265|gb|CI246114.1|CI246114 CI246114 Oryza sativa (japonica cultivar-group) Shoot and root of germinating seeds Oryza sat TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): TTTTTTTTTTTAAAAAAGCAAGCATTGCCAAAATGCTTTTATTCATATATAGACTTACAAAGATCACAACAAAGGTTCCAATGATAAATATCCATGTTCTCTCCACCCTGGGCTGCTCCTTACATTAAAAGAATGGAGATAGCTATGGACCTCCTTATCCAAATTAAGCGTAGCACATTGACCATAAAATTTAACAACAGTTCCTCCCACCCTACAAGCGACTCAGCAGCAAGCAGCAACCAAATATTACCGAAAATTTGAAGCATTTCACATCTTAGCAGCACGCGCGATCTTGAACCACTCGGTGTGGAGGGAGCCGGGCATGTCGACCCTCTCGTAGGTGTGAGCCCCGAAATAGTCCCTCTGTGCCTGCACCAGGTTGGCAGGCAGCCTGTCCCTCCGGTAGGAGTCGAAGTACGCGAGACTCGCCGACATGCCTGGGGTGCTGAC | |||||||||
gi|66926533|gb|CX113381.1|CX113381 EI081L10 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): GTGCTCGCTGCAGGTCCGGCGCGGCAATCCTTTTGGTCAGCCGACTGGTCAGTCTGACGCCGCCGTCTCTCGTGTAACCTATCTTATTGGATAAGATTACGTGTCTGCCGGTAGATTATGGGGTCTCGTGGCGGAGGAGCGACGGTGGTGGTGTGCCTGCTCAGAGATGCATGCGAGGACATCCGCAGACTCGACATACCGGACTGACTCGTACATCGAGTACCTGCTTCGGCGCAGGATGGCCGGAGGCTTCGAGTGGCGCTGCCCGTGCCGTAGATCCGAGCGCGCGCTCCACCACGGGGTATGCTCGGAGCACCGCTAGCGGACTCGTACGCGTGGTAGTCCCGCATTACTGAGGCAGTCGCCCGACGCGGCGTGGTGCCTTCCGTGCGAGAATGCGGTGGATGCGGCCATGGTGCCGACCGTAGGTTGACTGATGCCTTCCTTCCTGGCAAACTGTCCTCCCGTACGCTTCGCACTGTACTCACTTCCCGTCCGGGACGCGCGATCAGGGCCATGGGATGCCTGCCTAGCCAGTGATTGGCGATAGCCAGTGCGTACGCAGCCTGCGAAGGGAAGTCCTAGCTGGCTAGGCCGGGAGGCCGCGTGGCGTCGCCAATTGGGTGCATCTCGTCCAGCGGGAGGCCGTGCAGCTCGTTAGATCAAAAGGTGCCGGGGAGTTCAAGGCCGAGGCATAGTGGGTGTCCCGCCGGTGGGTTCACAGGTGGGCAGGCGCGAGATTCTGAAGAGGTGCGGTGGACGGTTCGCCGAAGCTGGTCGTCGACGCGAGGAAGCTCGACGGTCGAGGATCGATGGATCAACACTCGAACGAAGGATCGGAGACCATCTCCTAATCCATCGAGAACACGCGGGGCATACACGAGGGGGTCATGGTCACCCTACCGGGAGACCAATCACCGGTGTCACACGGTCGGTGAATGTGGAGAACGTGGCAGTACTTACCCGCTCAGTTACAAACCGCGCCATGACCGATTACCGACAGTGGGCGTGCACGGAGGCAGGCGGATGATCACCGCAGAAGTCGCGCACAAGGAGGGAAGAGAGCGCAGCCGGATGGCAAGACCCACGAACATAGGAGACGATAGAAGACAGCATACGAACGACGAGGCACGCCGAGNAAAACCAGACAGAAACAAAGCAAAGAAAGACAAGAAAGCAAGAAGAAGACAACAAAGAACAAGACAGCAAGACAGCACAGCAGACGCACGAGCGGCAAAACAGGAGCGACACGCAGCACGAAACCAACGACTGAAGAGCAGCGAGACAGACAGAGCCAAGCAACGCATACGACAACGACACAGACGACAGACAGATCAGCAGCACAGAGATAGACAGAGGAGTACGAGCAGACG | |||||||||
gi|117237240|gb|CT861814.1|CT861814 CT861814 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): AAAAATCAATGTCCCGTCCGATCGCGAGATCGCGATCGCAAACTGGCAAAATCGCACCCGCAAAAATATCTCGGCACGAGTCGACGCGACATTCCAATAGCAGCAGCAGCAAGCAGCATTCGCATTGGCCTCCGCGCGCTTTTGCGTTTACACCCCTCGCGCCCCCTCAAAATTGCAGACGCCACCCTCCCCTCCCCTCTCGTGCTCTCCTCTCCTCTCCTCTCCTCTTCCTCCTCGCCTCGCGTCGCCTCCTCCGCGGCGAACCCTAACCCTAGCCTCGCCTTCCCCCCAATGGCGCGTCACGCGTGAGGAGCCGCCGCCGGAGCAGCAGGAGCGGGAGAGGGAGGGAGGGAGGAGGAGATGTACAAGCAGGGGGGAGGAGGGGGAGGGGGAGGCGGGGCGGGCGGGGGGCCGGGCGAGAGACCGACGCGCCCGACAAGCACCCGGAGAAGGCGGCCGCCGCCGCCGCCCCGGCCCGCGACCCCCGCGACGACAGGGGGGAGGCGGGAGGGACGGAGCCCGGAGCGCACACACCCACGAGCAGGCGCGCCCGCCGCCCACCCCCCGCAAGGACAGCACCGAGAGGCGCCGGGGCGAAGCCGGACGGCAACGGCGCGGCGCGGGGCCCACAGACCAAGGGCAGCAGGGGGACGCGGGGCACGGGCGCCCACCCAGGGGGCCCCCACAACGCGCGCGGGGCACCGCGGGCGCGCGACGAGCAGGAAGAGACCGGGGAACGGGGCAGGGGGGGGCCAGGACACCCCGGCCCCCGGCGGCCGACCCGGGAGGCAACAAGGGAGGAAGGGCCGGCACGCCCCCGCCGCGGGACAAAAACACGCACCGCAGACGCGAAAAGGAAGCGGGCCGAAAGCGGGCGGCGCCACGGGCACCACCAGGCCCAGGACACCCCGAGCGCGCGGAGAAGAAAGGAAAGAGAGCCGAGGCCCGGGCCCGAGCCCCCAGAACGGCGGCGCGGGGGGGCACCGAGCCCGCCCAGCCAACAGCAGAAACCCCACGGCCCCGAACGGGCAGACGCACGACCCGAAGAGCGCCCCCCCCCCCGGACGAGCGCCACGCGACCGGGCGCCCGGCGCACACCGCCGGGCGGACCCGGGCCGCAGGAACCCACGGCGGGGAGGGAGAAGCCGACGGGGCGGCCGAACAGGCCAGAGGCGCCGCGCCACCGCAAAAGAAGCAGCGCGACGCCCACAAAACACCCCACCCCGAAAAGACCACACCCGGCAAACAAACCGGGGCGCCGCCGCGCCCCGCCCCGCCGCGCGACGGCAACCGCGCGACCACGCCGCA | |||||||||
gi|58659214|gb|CK047894.1|CK047894 49608rsiceh_20361.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CGGCACGAGGGCGGAGGACGTCGTCGAGGCGGCGAGGCTGGCGAGCGGCGGGCAGCCGTTCGAGGTCGTGTACTACCCGCGCGCCAGCACGCCGGAGTTCTGCGTGCGCGCGGCGGCGGTCCGCGCGGCGATGCGGGTGCAGTGGTGCCCCGGGATGCGGTTCAAGATGGCGTTCGAGACCGAGGACTCCTCCCGGATCAGCTGGTTCATGGGCACCGTCGCCAGCGTCCAGGTCGCCGACCCCATCCGTTGGCCGCAGTCGCCGTGGCGGCTTCTCCAGGTGACCTGGGACGAACCGGACCTCCTCCAGAACGTGAAGCGGGTGAGCCCATGGCTGGTCGAGCTGGTGTCGAGCATGCCGGCCATCCACCTCTCGTCCTTCTCGCCGCCGCGCAAGAAGCCCCGGATTCCGGCGTACCCGGAGTTCCCCTTCGAGGGGCAGCTCCTCAACCCGGCGTTCCCGCCAAACCCGCTGGCACACGGGCACCACCATTACCATCACAANCACCCGTCCTTCTTCCCGTTCCCCGACGTTAGTGCTCCTGCAGGCATACAGGGAGCCAGGCATGCGCAATTTGGTCCATCTTTATCAGATCTC | |||||||||
gi|58666683|gb|CK055369.1|CK055369 59519rsicek_15769.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TGCCTGGCTCCCTGCATGCC EST sequence (targeted fragment marked with yellow): CGGCACGAGGCGGACGCAGTGGTTCGCCGGCATGAGGTTCAAGATGGCATTCGAGACGGAGGACTCATCAAGGATCAGCTGGTTCATGGGCACTGTATCGGCCGTGCAGGTTGCTGACCCCATTAGATGGCCTAATTCACCATGGAGGCTTCTTCAGGTTTCATGGGATGAACCGGACTTGTTACAGAATGTGAAGAGGGTGAGCCCATGGTTGGTTGAGCTTGTGTCAAACATGCCGGCCATCCACCTTGCTCCATTCTCGCCTCCACGGAAGAAGCTTTGCGTGCCGTTGTACCCCGAGCTTCCCATCGACGGCCAATTTCCGACACCGATGTTCCATGGAAACCCGCTCGCCCGTGGGGTTGGTCCTATGTGCTATTTCCCGGATGGCACTCCTGCAGGCATACAGGGAGCCAGGCATGCTCAATTTGGTATATCTTTATCAGATCTCCACCTTAACAAACTGCAGTCGAGTCTATCGCCCCACGGGCTTCACCAGCTTGATCACGGCATGCAGCCGAGGATCGCCGCTGGTCTAATTATCGGTCATCCGGCTGCTCGGGATGATATCTCATGCTTGTTGACCATTGGTAGCCCCCAGAACAACAAGAAATCAGATGCCAAGAAGGCGCCAGCCCAGCTGATGCTTTTCG | |||||||||