| mature miRNA: TGCCTGGCTCCCTGTATGCCA species: Ricinus communis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|117351793|gb|EG682387.1|EG682387 RCRAH59TP Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRAH59, m TGCCTGGCTCCCTGTATGCCA EST sequence (targeted fragment marked with yellow): CCTAATTTTGCTCCTCCTGTAGCACTTTCTTCTCCTCGAATTGTAAGCATAGAGAAGACAAATTTTTTCATCTATTTTAGATGCATACTTGTATATTCACTTCTTGCTCTTGCATTGAACATTCATGCTCATACATATATATTTATATATAATATAATATACGCATCACATACAATCATGGATCATACATAAGATACATGCTTACATAGTTAGAGAAATGCTTATTTTAAGCTTTAATCATCATGCATCATCATCATTATCATATCATGCATATAAACATATATTTTTGTATATGCCTGGCTCCCTGTATGCCATTTGCAGAGCCCACCGGAGCATCGATGGCCTCCGTGGATGGCGTATGAGGAGCCATGCATATTCCTATTTATATTATATATCTATGGTATATATATATTTTATGCAGATTGTTTTCATTTATGATCTTATCTAGCGAGGAAGATGGCATTAATGGAGAAATTTGAAGAGGGCAGCATTGTAATTTCGAAAAGATTCAGGTTCTTTGAAGTTACTTTCACTTTATTTATCTTCTTTCTGGAATATCATTATTCTTCTCATGATTTAGGGTTTTTATCTATTTTTCTTTTAAGTCTCTTCTTTGTTTTTATTTTTCATTGTGTGATGCTTATCTTTAAACCTTTGGCAGAGAGGATATTAGATGAATTATATTTAAGTTTTCTGTTTGGGAATAATTTCCATAACCAGAGGTCTCATGTGTACTCTCTATGACTTGATTTATAAATATCGGTATTAC | |||||||||
gi|117335342|gb|EG667132.1|EG667132 RCRBZ35TO Castor bean cDNA library from roots, 1.8 kb Ricinus communis cDNA clone RCRBZ35, m TGCCTGGCTCCCTGTATGCCA EST sequence (targeted fragment marked with yellow): CAAGTCATAGAGAGTACACATGAGACCTCTGGTTATGGAAATTATTCCCAAACAGAAAACTTAAATATAATTCATCTAATATCCTCTCTGCCAAAGGTTTAAAGATAAGCATCACACAATGAAAAATAAAAACAAAGAAGAGACTTAAAAGAAAAATAGATAAAAACCCTAAATCATGAGAAGAATAATGATATTCCAGAAAGAAGATAAATAAAGTGAAAGTAACTTCAAAGAACCTGAATCTTTTCGAAATTACAATGCTGCCCTCTTCAAATTTCTCCATTAATGCCATCTTCCTCGCTAGATAAGATCATAAATGAAAACAATCTGCATAAAATATATATATACCATAGATATATAATATAAATAGGAATATGCATGGCTCCTCATACGCCATCCACGGAGGCCATCGATGCTCCGGTGGGCTCTGCAAATGGCATACAGGGAGCCAGGCATATACAAAAATATATGTTTATATGCATGATATGATAATGATGATGATGCATGATGATTAAAGCTTAAAATAAGCATTTCTCTAACTATGTAAGCATGTATCTTATGTATGATCCATGATTGTATGTGATGCGTATATTATATTATATATAAATATATATGTATGAGCATGAATGTTCAATGCAAGAGCAAGAAGTGAATATACAAGTATGCATCTAAAATAGATGAAAAAATTTGTCTTCTCTATGCTTACAATTCGAGGAGAAGAAAGTGCTACAGGAGGAGCAAAATTAGGGCAAACAAAGACAGACAGGGAGAGAGAGAGAGACAGAAATAGAGAAGGTA | |||||||||