| mature miRNA: TGCCTGGCTCCCTGTATGCCA species: Sorghum bicolor database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|30963790|gb|CD220356.1|CD220356 CCC1_66_G04.g1_A007 Callus culture/cell suspension Sorghum bicolor cDNA clone CCC1_66_G04_A00 TGCCTGGCTCCCTGTATGCCA EST sequence (targeted fragment marked with yellow): TGTCGGCCTTCTTGAGGATGAGGAGAGTAAGATGATCAAGGGTCCTGGTGGGTACATGAGAGGCAGGGGGAAGGTCAAGATCACGGATGTTGTTGAGGCCGCAAGCCTTGCGGCCAGCGGCCAACCATTTGAGGTGGTGTACTACCCGAGAGCTAGCACACCGGAGTTTGTTGTCAAGGCAGCATCGGTGCAGAACGCGATGAGGAACCAGTGGTGCCCTGGGATGAGGTTCAAGATGGCATTTGAGACAGAGGATTCATCAAGGATCAGCTGGTTTATGGGGACCATAGCTTCTGCTCAGGTTGCCGACCCAATCAGATGGCCAAATTCACCGTGGAGGCTTCTTCAGGTGACATGGGATGAACCTGACTTGCTGCAGAATGTGAAATGTGTCAATCCATGGCTTGTGGAGATTGTATCAAGCATTCCACCCATTCACCTGGGACCATTTTCTCCACCTAGAAAGAAGTTGCGGATGCCCCAACATCCAGACTTTCCATTTGACGGTCAGCTGTTGAATCCAATTTTCCACGGCAACCCACTTGGTCCAAGCAACAGCGCTCTTCGCTGTTTCTCGGACATTGCTCCTGCAGGCATACAGGGAGCCTGGCATGCTCAATTTGGTTTACCCCTAACAGACCACCAGCTTAGCAAGCTGCACCT | |||||||||
gi|33110393|gb|CF073734.1|CF073734 FE1_12_G05.b1_A002 Iron-deficient seedlings Sorghum bicolor cDNA clone FE1_12_G05_A002 3', mR TGCCTGGCTCCCTGTATGCCA EST sequence (targeted fragment marked with yellow): CAAATTAGCATGTGGGGAGCCAGGCCCGATATTTGGCATTTGCCCCCACAGCATTATTTGAAGGGTCAACAAATGCAAGGAGCATTTGCATACATTTCTGTTCATACAGATACAGTATCCACAGATATCATACAAACAACTGAAGCATGCCCATCAAAGGGCGAAATGAATGACAAATCGAACACATACAGCCATTTCTGTGACTAAAATTCCGAGCAGATGGCCAGAGGCAGCAATGAATTTAATCAGTACCGCAGTACAATCCCTAAACTACTAGCTGGTGCAGCACCCCATACAAGATTCGTGGTTCAGTCTTGTGACGTAACTGTAGCAGAGTCCCAATCAAACCATGTACGTCATACCAACACGCATGATGTTCGAATGGGGGACCTTCAGGGTTGCAGTGCCAGCCCTGCAGTTCCTCCTGAGGAATGCATAGAAATAATTAATGACAAACTTCTTCATGAAGAGCGACTCCTTCCTTGCCCTCACATC | |||||||||