| mature miRNA: TGGAAGGGGCATGCAGAGGAG species: Elaeis guineensis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161977879|gb|EL693035.1|EL693035 OPR03078 Elaeis guineensis root Elaeis guineensis cDNA clone OPVRXX_A2186.seq, mRNA sequence TGGAAGGGGCATGCAGAGGAG EST sequence (targeted fragment marked with yellow): ACTCTTTATCATACTTATTATTCGAACTTTGCGTTATACTTGCAACATTGTCAGAGTATTCCTACTTTCCATTGCCTAATTGCCCACAACACATGGTGTTACCATCATAACACATGTTCCATTGTAGTACTTGGGTTGCCAGCACCTATCTAAACGACGGCCAAGCTTAATTACCCCGTGGCACACACTTGATATCTGGCCACACAATATCCCTTTATTGGACTAAATTCACCTGGTCAAACCCAATTGTGATACCCCGATTCAAGCTCAAGCATTAAACACGCTCCCTTATTGCCAAACATTGCGCACAAGGACATTCACCTTCTTAGCCACAAGCTCACGTTCACACATCCCACATACATTGCGGCCCTGGCACCTTATTGCAACGTGCGCCATATTATCTGCGCCATGACGTTTAATTTCGCCTGACACGAGGACTCTTAGCACTTACATTTTCTTCAATACAATTAGATTTGAGGCTTTCCACCCAAGTAGGGATTCAACCCAAAACAAGGTGGTCGGCAAAGGAAAGAGGGTATGGTTAACAACAATTATGCCTATTTGACAATTCCTCGACACTCTTCATCTCGGCGGGCACCATTAGCCTCTTATATATGCCTCTTCCACTATATGTAGAAACGCCACCATTTGGTGGCCAACGCAACACAGCACGGCAATTCTCCACCCAAGGTAGCAATTATTGCCCATTTGGCCCTTCAACACTTTGTGGCCCAGATGGAACTATGCAACAGCGGGCCTTTGGCACAACCTTCTACTTTCTGCCAACATGCACCTTTACCAAAGGCCACCCCCACATTTAGTCGTCGCCACCACCACAGACCACTCTCTATCTAGGCTGCAACCCTACATTTTGACCCCACAACATCATAATATGAGCGCAGACAACCGGCGCACACGACAACACCTTCTTCGACAAGACACTTTTTCGGACCCACAGCACACATACTCACATTCTCACTAATACTCTCAAGTACTCGATGTCAAAAATCTAGATGTTTGGGCACCCCCCGCCCGTATTTTCCCCGGATTAAGCCGTTTTGTGCCAATACATACGGAGAATTGTATTCCAATTAATACCGTTTCGAAAACACTTAGATATTATCGATCTTCTGAGAGTCGATCTTGATACTTGATCACCCCAAAGAATGATTGACAGCCGATTAAGACATGAGACAAACTTTCAAGGCAGCGTGACACACGGTACGTCGTGTCACACATCATTGAACAGGCACCAAACATACTAGCTATCTCTACGGGAGTCTCACTACCCGCCACTTGCTAAACAACAGCAACTCTCACACTGGCGGAACAATTTTCCCCTTCTAAAACGAGAGAATACTGGCACTACACGCAGGCCGATCTATACGATGGCGTGTCAACACTAGTTATCAAACGGCGCAACCATCAACCATAGGGTCATACAGCCCAACACATTAACTCGCAGACGCGACAACGCACAATCAACGATGGGGACAACTTCCCAACACATTTGTGTACAGTCGGGGCACATATTTGTGTGTGCACGATTGGTGACCAACGCCATTAACCAACGTGATAGATTATCTAGTAACACAACACCGTATATAACACAACACTACACAACACATAACTAGCGCAAAGCAGAACAAACACAACAACAACAGAAGACAACGCTCTCTCGGCACAAGGTAGGAATGAAGTATGCCAGGTGGTCACTCACCCACACGAGGGTGATGTAATACTGCGACCCGCCATAATACACATCGTTTCAGCTGTGTATCCCCACCACCCCATACAGTTGATCAAGCAGAGATCATTAGGGACCGAG | |||||||||