| mature miRNA: TGGAGAAGCAGGGCACGTG species: Paullinia cupana var. sorbilis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|196462841|gb|EC774479.1|EC774479 EST 10975 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence TGGAGAAGCAGGGCACGTG EST sequence (targeted fragment marked with yellow): AAAAGCAGGCTATATCGTCGACCCACGCGTCCGGTGCTCTTCAACAATTGGGAATGATACAGCACAACGCTTGGAGACCACAGAGAGGATTGCCTGAAAGAGCCGTCTCTGTTCTTCGCGCTTGGCTCTTTGAACACTTTCTTCATCCTTACCCGAAAGATTCGGATAAGCAAATGTTAGCTAAACAAACAGGGCTTACTAGGAGTCAGGTGTCCAATTGGTTCATTAATGCTAGAGTGCGGCTCTGGAAGCCCATGGTTGAAGAAATGTACACGGAGGAAATTAAGGAACATCAGCAAAATGGTTCCGAAGACAAATCAAGCAAAAGTGATCACAATGAAGATTCGGCTTCCAAGTCAACTGGAGCAGCACTCGACAAAAGCCCTCTTACTGATAATCAGGACAATGTTCACACAATTATTTCAATGTCCACATCCTCTACTTCTCCAATTGCTGCTGCAAATCTTCG | |||||||||
gi|196469253|gb|EC777059.1|EC777059 EST 13555 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence TGGAGAAGCAGGGCACGTG EST sequence (targeted fragment marked with yellow): ATTAGGTGACACTATAGCAACAAGTTGTACAAAAAAGCAGGCTATTCGTCGACCCACGCGTCCGGAAGACACATATTCAAGGAATAATGAAATTAGGCTCATTCCAAAACGATATGATGTCATCATCCTCTGTTTTACCTCCATTAATGGACTCTCCACCTCCTTACAACACCATCAATGAAACATCTCACGTGACCTGCTTCTCCGACCCCATGGAGGATCACAACAAAACGACCACCAAGACAACAACACAACATCAACAACATCAACAAGACAACAACATGGTCGTCGAATCCTCTGTTTCTATCACCCCTGTTTCACTCTTCAACAACAACAACAACAAATTCTCTGTTTCTTTACCAAACTCTGTTTTCTCAAACCAAATCCTCCAATACCCAGATGCTTTTCTGTTTCAAGACCACTCTATTCTGAAGATTTTAATGGAGAATCAAACACAGTCAAACATGAAACTCAACCCAACAAAACAAGAGTTCTCACAAGACTCAGTTCTGTCCAACCAGGAAGCTCCATCAACTTCTCCAGTAGACCTTGATTGTCTCTGGAATTATTATTGATTATAATTATTGTTTTATGATTATTATTATTATTGTCGTTAAAAAAAATTGTGATATAACGTCATA | |||||||||
gi|196468931|gb|EC771368.1|EC771368 EST 7864 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence TGGAGAAGCAGGGCACGTG EST sequence (targeted fragment marked with yellow): AAGCAGGCTATATCGTCGACCCACGCGTCCGGGGTGAAGAAGATTGCTTAGGAGGGAAGATTGAAGGCTCCAGATTGAAATTCGTGGATCATCATCTTCGACAACAACGTGCTCTTCAACAATTGGGAATGATACAGCACAACGCTTGGAGACCACAGAGAGGATTGCCTGAAAGAGCCGTCTCTGTTCTTCGCGCTTGGCTCTTTGAACACTTTCTTCATCCTTACCCGAAAGATTCGGATAAGCAAATGTTAGCTAAACAAACAGGGCTTACTAGGAGTCAGGTGTCCAATTGGTTCATTAATGCTAGAGTGCGGCTCTGGAAGCCCATGGTTGAAGAAATGTACACGGAGGAAATTAAGGAACATCAGCAAAATGGTTCCGAAGACAAATCAAGCAAAAGTGATCACAATGAAGATTCGGCTTCCAAGTCAACTGGAGCAGCACTCGACAAAAGCCCTCTTACTGATAATCAGGACAATGTTCACACAATTATTTCAATGTCCACATCCTCTACTTCTCCAATTGCTGCTGCAAATCTTCGAAACCAATCTGGATTCTCACTCATTGGTTCCTCAGAATTAGAAGGTTTCACCAACACACAAGCTAGTCCT | |||||||||
gi|196473007|gb|EC769803.1|EC769803 EST 6299 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence TGGAGAAGCAGGGCACGTG EST sequence (targeted fragment marked with yellow): TGTACAAAAAAGCAGGCTATATCGTCGACCCACGCGTCCGTGAGCTACAGAACCAATGAGAATAAGCATCCTTTATCCTCTTCTTTATTTGGTACAAAATTATTTGTCGACAAAGCAACAATTGTTTCTAGACCGGTGAACTTGAGAGCTAGTGGAATCACTTGCTCTGCTTCTGCTCCTTCTGTTCTCCCATCAGCTCTGCTTTTTGATTGTGATGGCGTGTTGGTTGATACTGAGAAGGATGGCCACAGGGTCTCATTCAATGACACTTTTGAAGAAAAAGAGTTAGGTGTTACATGGGACATTGATCTCTATGGCGAGTTACTGAAGATTGGTGGAGGAAAAGAAAGGATGACAGCTTATTTTAACAAGACAGGTTGGCCAGAAAATGCTCCAAAGGGTGAAGCAGAAAGAAAGGATTTCATAGCTTCACTTCACAAAAGGAAGACAGAGTTGTTCATGGCCCTTATTGAGAAGAAGTTGCTACCTCTACGGCCTGGAGTTGCAAAGCTGATAGATCAGGCATTGGGAAATGGAG | |||||||||
gi|196467203|gb|EC770762.1|EC770762 EST 7258 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence TGGAGAAGCAGGGCACGTG EST sequence (targeted fragment marked with yellow): AAAGCAGGCTGGTACCGGTCCGGATTTCCCGGGATATCGTCGACCCACGCGTTCGGAGGATTCTTGTCACTGGAGGAGCTGGATTCATTGGTTCTCACCTTGTAGACAAGTTAATGGAGAACGAAAAGAATGAGGTGATTGTTGCTGATAATTACTTCACTGGATCAAAGGACAATCTAAAGAAATGGATCGGTCATCCAAGATTTGAGCTCATTCGTCATGATGTAACTGAGCCATTGTTGGTTGAAGTTGATCAAATATACCATTTGGCTTGTCCTGCTTCTCCGATCTTCTATAAGTACAATCCTGTCAAGACCATCAAGACAAATGTGATTGGTACTTTGAATATGTTAGGACTCGCCAAGCGTGTTGGAGCTAGGATTTTGCTCACTTCAACATCAGAGGTGTATGGTGACCCTCTTGTGCATCCCCAGGAAGAGAGCTACTGGGGAAATGTTAATCCTATCGGAGTCAGGAGTTGCTATGATGAAGGAAAACGTGTTGCTGAAACTTTGATGTTTGATTACCATCGCCAGCATGGAATTGAGATCAGGATCGCAAGGATTTTCAACACCTATGGACCTCGCATGAACATTGATGATGGGCGCGTTGTCAGCAACTTCATTGCTCAAGCTATCCGTGGTGAGCCCTTGACTGTTCAAGCACCTGGAACTCAAACAAGGAGTTTCTGTTATGTCTCAGATATGGTGGATGGCTTGATCCGGCTTATGGAAGGAGAAAATACTGGTCCGATCAACATTGGGAACCCTGGTGAATTCACAATGCTGGAACTTGC | |||||||||
gi|196465684|gb|EC768478.1|EC768478 EST 4974 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence TGGAGAAGCAGGGCACGTG EST sequence (targeted fragment marked with yellow): CGGGATATCGTCGACCCACGCGTCGAAAAATGTCAAAAGAAGTGAAGTTGTTTGGAGTATGGGGGAGTCCATTTAGTAAAAGAGTGGAAATAGCACTGAAACTGAAAGGCATAGAGTACGAATACAGAGAAGAGGATCTAAGCAACAAAAGTCCTCTGCTTCTCCAATACAACCCAGTTCACAAAAAATCCCAGTGTTGGTCCACAATGGAAAACCCATTGCAGAGTCACTAGTGATCGTCGAATACATAGATGAGACCTGGAAACACAACCCAATCTTGCCTCATGATCCATATGACCGAGCTATGGCTCGATTCTGGGCAAAATTCATCGAAGAGAAGGTGATGCCTTCGCTGTGGAACGCTAGCTGGAGCC | |||||||||
gi|196462345|gb|EC775737.1|EC775737 EST 12233 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence TGGAGAAGCAGGGCACGTG EST sequence (targeted fragment marked with yellow): CAAAAAGCAGGCTATATCGTCGACCCACGCGTCCGTTCAAATTTCTCTTCAATTAAATTTCACTATTTTTTTTCCAGATAAAACCCTAAGTTCAAACTCATCACCCAATTCAAATTCCATCTATTATCTTTTTGCAAATGGCTGCCTCTGATTCCTCCGCTTCACTTCCCGTGTCTGCTCCTCTTGCGCCTAAAAAGGAGAATATCACTCCAGTTGGTTCAAAACTAGCGGAATTGAATGAATCGAGGACGGAGTTGCTTAATAGGATTCAGGGGCTCAAACAGGATTTGCAAAGTTGGAGGTCAAAGCTGGACAGCCAAGTCAAGGTTTATCGTGATGAGTTGTCTGAAATGAAAAAAACTTTGAGCATTGAAGTTGACCAACTCAGATCAGAATTTCAAGAGCTGCGGAGCACTCTTCAGCAGCAACAAGATGATGTTTCTGCTAGCCTCAAAAACTTAGGGTTGCAAGATGTTTCTGGAGATGTAAAACAGGTCGAGGAAATGAAGACGGACGGGAAAGATGAGGAAGTCCATACCACCCATGATAACGATATCGATAAGTGATAATGTCAGGTTTCATTTTACGAATTCTGGTTCTGGGTGCTTCCCTGATTTAGAATCTGTGTCCTGCTTGTCCACATTTAACTCCATTCTTAA | |||||||||
gi|196461122|gb|EC768502.1|EC768502 EST 4998 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence TGGAGAAGCAGGGCACGTG EST sequence (targeted fragment marked with yellow): TGTACAAAAAAGCAGGCTGGTACGGTCCGGAATTCCCGGGATATCGTCGACCCACGCGTCCGCAAAAATGGCAAAAGAAGTGAAGTTGTTTGGTGTATGGGGGAGTCCATTTAGTAGAAGAGTGGAAATAGCACTGAAACTGAAAGGCATAGAGTACGAATATATAGAAGAGGATCTAAGCAACAAAAGTCCTCTGCTTCTCCAATACAACCCAGTTCACAAAAAAATCCCAGTGTTGGTCCACAATGGAAAACCCATTGCAGAGTCGCTTGTGATCATCGAATACATAGATGAGACCTGGAAACACAACCCAATCTTGCCTCAGGATCCATATGACCTAGCTATGGCTCGATTCTGGGCAAAATTCATTGATGACAAGTGCCTGCCTGCGCTGTGGAAATCGGTGTGGAGCAAAGGGGAGGAGAAAGAAGAGGCTATTAAGGAATCAAATGGGTGTTTAAAGATACTTGAAGATGAACTCAAAGACAAAAAGTACTTTGG | |||||||||