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mature miRNA: TGGAGAAGCAGGGCACGTGCA
species: Paullinia cupana var. sorbilis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|196469253|gb|EC777059.1|EC777059 EST 13555 Guarana fruits cDNA library Paullinia cupana var. sorbilis cDNA, mRNA sequence

TGGAGAAGCAGGGCACGTGCA
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GCCTCTTCGTCCAGTGCAC-T

EST sequence (targeted fragment marked with yellow):
ATTAGGTGACACTATAGCAACAAGTTGTACAAAAAAGCAGGCTATTCGTCGACCCACGCGTCCGGAAGACACATATTCAAGGAATAATGAAATTAGGCTCATTCCAAAACGATATGATGTCATCATCCTCTGTTTTACCTCCATTAATGGACTCTCCACCTCCTTACAACACCATCAATGAAACATCTCACGTGACCTGCTTCTCCGACCCCATGGAGGATCACAACAAAACGACCACCAAGACAACAACACAACATCAACAACATCAACAAGACAACAACATGGTCGTCGAATCCTCTGTTTCTATCACCCCTGTTTCACTCTTCAACAACAACAACAACAAATTCTCTGTTTCTTTACCAAACTCTGTTTTCTCAAACCAAATCCTCCAATACCCAGATGCTTTTCTGTTTCAAGACCACTCTATTCTGAAGATTTTAATGGAGAATCAAACACAGTCAAACATGAAACTCAACCCAACAAAACAAGAGTTCTCACAAGACTCAGTTCTGTCCAACCAGGAAGCTCCATCAACTTCTCCAGTAGACCTTGATTGTCTCTGGAATTATTATTGATTATAATTATTGTTTTATGATTATTATTATTATTGTCGTTAAAAAAAATTGTGATATAACGTCATA