| mature miRNA: TGGAGAAGCAGGGTACGTGCA species: Lactuca perennis database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|83886592|gb|DW088672.1|DW088672 CLPY12477.b1_J23.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPY12477, mRNA se TGGAGAAGCAGGGTACGTGCA EST sequence (targeted fragment marked with yellow): CGGGGATTAAACCTCTGAATCTTTCTGCTTACACTATCTTTTGGTTTTACTTTTCTGTCATGGCTGCCTTTTTTCTACTTCTTCAATGATTTCCTTTCCCATAGCTTTCTTTCACCAGTCTACTCCTATTTATATTCATTCAACCTTGAAAAACAAATAAAGCAAGCTATTCGATGAAAAACCCATATGAAATTTCCGCCTAGAAAGTGATTTTTCGTCAAAAGTTTTCAAGGGTTTTAGAAGATGGAGAAGCTCTGTGATCCTGCTCGAGAAGATGATCAAATGGATATGCCTCCAGGATTCCGATTTCATCCTACAGATGAAGAACTCATCACTCATTATCTCTCTAACAAAGCTGTCGATACCACCTTCTTTGCAAAAGCAATCGGAGAAGTCGACATGAACAGAATCGAGCCATGGGAGTTACCTACGATGGCGAAAATGGGAGAAAAAGAGTGGTACTTTTTCTGTTTTAGGGATAAGAAGTATCCCACTGGATTACGAACAAACAGAGCAACCGCCGCCGGTTACTGGAAAGCCACCGGAAAAGATAAGGATATTTACAGAGGGAGATTGCTCGTCGGAATGAAGAAGACTTTGGTTTTCTACATGGGAAGAGCTCCAAAAGGGGAAAAGACAAATTGGGTGATTCATGAATATAGATTAGAGGGTAAATTCAGTCTGCAAAATTTGCCAAAATCAGCCAAGAATGAATGGGTTATTTGTCGTGTGTTTCACAAGACTTCAGGCGGGAAGAAGGTCCCCATTTCCGGGCTGATGCGGATGGATTCCGGCGGTGTTACCAGGTCGCTGCCACCATTGATGGACTCTCCGGCGGCGTTTGGTGGAGGGACATCAGTCAATTAGTATATCCGATTCACTACACGTACCCTGCTTCTCCAATCAAGTCGATATTTCAAACA | |||||||||
gi|83886511|gb|DW088591.1|DW088591 CLPY12402.b1_D05.ab1 CLP(XYZ) lettuce perennis Lactuca perennis cDNA clone CLPY12402, mRNA se TGGAGAAGCAGGGTACGTGCA EST sequence (targeted fragment marked with yellow): ACCTCTGAATCTTTCTGCTTACACTATCTTTTGGTTTTACTTTTCTGTCATGGCTGCCTTTTTTCTACTTCTTCAATGATTTCCTTTCCCATAGCTTTCTTTCACCAGTCTACTCCTATTTATATTCATTCAACCTTGAAAAACAAATAAAGCAAGCTATTCGATGAAAAACCCATATGAAATTTCCGCCTAGAAAGTGATTTTTCGTCAAAAGTTTTCAAGGGTTTTAGAAGATGGAGAAGCTCTGTGATCCTGCTCGAGAAGATGATCAAATGGATATGCCTCCAGGATTCCGATTTCATCCTACAGATGAAGAACTCATCACTCATTATCTCTCTAACAAAGCTGTCGATACCACCTTCTTTGCAAAAGCAATCGGAGAAGTCGACATGAACAGAATCGAGCCATGGGAGTTACCTACGATGGCGAAAATGGGAGAAAAAGAGTGGTACTTTTTCTGTTTTAGGGATAAGAAGTATCCCACTGGATTACGAACAAACAGAGCAACCGCCGCCGGTTACTGGAAAGCCACCGGAAAAGATAAGGATATTTACAGAGGGAGATTGCTCGTCGGAATGAAGAAGACTTTGGTTTTCTACATGGGAAGAGCTCCAAAAGGGGAAAAGACAAATTGGGTGATTCATGAATATAGATTAGAGGGTAAATTCAGTCTGCAAAATTTGCCAAAATCAGCCAAGAATGAATGGGTTATTTGTCGTGTGTTTCACAAGACTTCAGGCGGGAAGAAGGTCCCCATTTCCGGGCTGATGCGGATGGATTCCGGCGGTGTTACCAGGTCGCTGCCACCATTGATGGACTCTCCGNGCGCGTTTGGTGGAAGAACATCAGTCCAATTAGTATATCCGATTCACTACACGTACCCTGCTTCTCCAATCAAGTCGATATTCAAACAACCCAGAAAACCAT | |||||||||