| mature miRNA: TGGAGGCAGCGGTTCATCGAT species: Nicotiana tabacum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|190785735|gb|FG165515.1|FG165515 AGN_RNC011xb22r1.ab1 AGN_RNC Nicotiana tabacum cDNA 3', mRNA sequence TGGAGGCAGCGGTTCATCGAT EST sequence (targeted fragment marked with yellow): GTACATGAGCAGTGCACAATGCCATGACTTACACTTTGCATCACAGCAGTGCGTGAACAATGCAGCATCTACTTCTACAGGTGGATAGGTGGATCGCTGCCTCTGCATTCTACTTCTGCACCAGCACAAACAGTACATGAGCAAGTGCAACAAATTCCACTGAACTCTACCTCTCTTGCATCACAAGCAGTACGTAAACAATTGCAACAACTACCACTGGATTCCACCACTCGTGCTTCACAAACGGTACAAGAACAAGTTGAGGATTCTTCCAATCATGAAACAAACGAGCAATCCGAGGAACAAGGCAAGAACATGTAGATTTCAATAGTTAAATTCAATAACGTAATGACTTTTGGTGGCTATTTTACTTCATATTAATGTAGTTCCTTCTGCCAAAAAACGAAAAAGAGGAAAAACTTAGATGCAAAGTGTTCATGGTAGGAAAGAGCGCAAGCAAATTGTGCTAAATGAGAACAATCAACCCATGGGTCCTACTGATGATGATGTAAATGAGTTGGGTAGCTTCCTTGGTACGTTGGCAAGGAATGCGACCTTTTGTCCTCTTAATGTGTTTGATTGGAGGAAACCTGAGACAAAAGAAGATATATGAAAATATGTCAAGGGAAAATATGACATTCATGAAGGTGCAAAAAAGTGGGTTTTTTCAATCAATTTGAAATGCTTGGAGAAAGTACAAAAACCAGTTATATAAAGACCATTTTGAACCCTATGAGAATGACGAGCTTCGAATGGAGAATAGGCCGGTTGATGTTCTGGATTCTCAATTTAGGGAACTTCTTAGATATTGGAACTCTGATACCTACAAGAAAATGAAAGAAACCAACACTGAGAATCGCAAAAAGTTGAGATATCCACACACTG | |||||||||
gi|190777493|gb|FG165445.1|FG165445 AGN_RNC011xb22f1.ab1 AGN_RNC Nicotiana tabacum cDNA 5', mRNA sequence TGGAGGCAGCGGTTCATCGAT EST sequence (targeted fragment marked with yellow): CTCAGACAACTTCTTCAACTGCAAACGCCTTTCTCTCTCCAAAAATCTTCTTCTCTCGTTCACTCTAAGAAATCTGTTGAATCTTCCTCTCTATCGTATTCCTCTCTTTCACTCTCTGAACTTGGTTTAATAGGTTTTTACAAATAAGTTTTGCTGATTTAGTGGGGTGGCAAAATTTTGGGTATCGTGAAGGGGGTGGCGAAATTTTGAGGCATCTGAGCAGACTTCCTCAAAATAGGTGCTCTCCCCAAATCCCTAATTCCAACACTAGTGATTTTAGCCATAGGAAAGCGGATCATGAATCAGGAAGGGCGCTCAAGTAAAAATAAAAAATTAACAAAATGCATTGCAGCTGGATCGCTTGCATCTTTGCGAAACCTAAAGGTTTCGTCATTGAAAACAAACAGAGTTATTAATGCTCCAAGGTCACTGCCTCTGCATTCTACTTCACACTAGCACAAACAGTACATGAGCAAGTGCAACAAATGCCACTGAACTCTACACCTTCTGCATCACAAGCAGTGCGTGAACAATTGCAGCATTCTACTTCTACAGGTGGATAGGTGGATCGCTGCCTCTGCATTCTACTTCTGCACCAGCACAAACAGTACATGAGCAAGTGCAACAAATTCCACTGAACTCTACCTCTCTTGCATCACAAGCAGTACGTAAACAATTGCAACAACTACCACTGGATTCCACCACTCGTGCTTCACAAACGGTACAAGAACAAGTTGAGGATTCTTCCAATCATGAACAACGAGCATCCGAGGACAGCAGAACATGTAGATTTCATAGTAAATCATACGTAATGACTTTGTGCTATTTTACTTCATATTAATGTAGTTCC | |||||||||