| mature miRNA: TGGAGTCAGCGGTTCATCGAT species: Centaurea maculosa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|124622331|gb|EH719567.1|EH719567 CNML6052.b1_H02.ab1 CNM(LMS) spotted knapweed Centaurea maculosa cDNA clone CNML6052, mRNA s TGGAGTCAGCGGTTCATCGAT EST sequence (targeted fragment marked with yellow): CCACAGGAGGAAGACGATGATCATGAAGTTGTTAACTTCGGTAGATCACTCATAGTACCAAGTGTTCAAGAACTTGCAAAGCAGCCACTCACCAAGATCCCACTTCGATATGTGCGCCAATTTCATGAATCTCTCTCCGATGATGATGATCCGTTGACTCCATCTGTTCCAGTTATTGATCTTCACAACTTACTTCAAACCGCTTCTGCTGAATCTTCTTCAACGTATTCCGTTGAGCTCAATAAGCTTCATTCAGCTTCTAAACAATGGGGTTTCTTCCAGGTTATAAACCATGGAATAAACGAGTCCTTATTGGAGGATTTTAAGAGGGAAGTCTTGAACTTTTTCAACCTCCCGATGGAAGATAAACAAAAGCTTTGGCCGGAAGAAGACAACCATGAAGGATTCGGTCAATTGTTTGTTGTATCAGAGGAGCAAAAGCTTGACTGGCCCGACATGTTTTACATAACTACCCTTCCACACAATCTCCGGAAATCCCAGCTATTTCAAAAGTTGCCTCTCATTCTCAGGGATAAGTTGGAAGACTACTCCAAGGAAATGAAGAAGCTAGCAACGACCATCTTGGGTCAAATGGCTAAGGCTCTCGAGATGGATGGAGATGAAATGAGAGAGTTGTTTGACGATGGCGTGCATCCAATAAGAATGAATTATTATCCCCCATGTCCCGAGCCTGAACTGGCTTTGAGATTCTCCCCACATTCCGATGCAGATGCTTTAACCATCCTCTATCAAC | |||||||||