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mature miRNA: TGGAGTGGAGTGGACTGGAGT
species: Triticum monococcum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|20315025|gb|BQ169062.1|BQ169062 WHE2493_F02_L03ZT Triticum monococcum early reproductive apex cDNA library Triticum monococcu 

TGGAGTGGAGTGGACTGGAGT
 ||||||||||||||||||||
CCCTCACCTCACCTGACCTCA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTTTTTTTGGATGCTGGCCGACACTGGGCGTCGACCCGACAACACTTCTTTTATTTAGCCCACGCCACGCGCCACCCCGCGCAAAGCACCTCACACCTCGTAGTACAAAGCAGTAGCACCCACTCCAGTCCACTCCACTCCCTGGCTGACTCAGCATCACGCCGTGCCACGTAGGAGCACACGGCCGCCGCCGTGGACGCTGACCTAGCCAGCCCCTCCTCCGCGCGCGCCGGCGCCTCACACGCTGACGCTGGCCACCGCGGCGGCCGGCTCCTCTGCCGCGGCAGCGGGTGCCCGCTCCGCTGCAGCCGGTGCTTCCTCGGCGACGGCCGGCACCTCTGGCTCGGCAGCAGGCGCCGCCTCCTCCTTCACCTCCTCGACGACTGCCGGCTCTGCCTCAGCCACGGCCTCCTTGGTCTCTGCCTCGACGACGGCTGGCGCCTCTGGCTCTTTGGGCGCCTCGGCCTCCGGCTCGGCGGCAGCTGCTGGCTCGGGCTCCTTGGT


gi|25443926|gb|CA722133.1|CA722133 wds1c.pk003.c6.f wds1c Triticum monococcum cDNA clone wds1c.pk003.c6.f 3' end, mRNA sequence 

TGGAGTGGAGTGGACTGGAGT
|||||||||||||||||||||
ACCTCACCTCACCTGACCTCA

EST sequence (targeted fragment marked with yellow):
ACAGCCACTATAGGGCGAATTGGGTACCGGGCCCCCCCTCGAGTTTTTTTTTTTTTTTTTTTTTGAGAAAACAGATGTCCGTAGATATAATGAATCATGTCTTATCGACAAAATAAAAGGCATACATTATCTAGAGTGGCACTGCGTCGCTCGCTCGATGCTCACCGACAACACTTTTATTTAGCCCACGTCACGCGACCCCGCGCATAGCACTCCACTCCACTCCACACCTAGTAGAGTACAGTAGTAAAAAGTAGGACTCCAGTCCACTCCACTCCACTGGCTGAGCATCACGCCGTGCCACGTAGGAGCACACGGCCGCCGCCGTGGACGCTGACCCAGCCAGCTCCTCCTCCGCGCGCACCGGNGCCTCACACGCTGACGCTGGCCACGGNGTCGGCCGGCTCCTCTGCCGCGGGCGCGGGTGCCTCCTCCGCTGCAAGCCGGTGCTTCCTCGGNGACGGGCGGNAACTCCGGCTCGGGAAGCAAGGGGCGGCTCCTCCTTTAACTCCTCGANGACTGGCGGGTCTGGCTCTGGCANGGGCTCCT


gi|25443926|gb|CA722133.1|CA722133 wds1c.pk003.c6.f wds1c Triticum monococcum cDNA clone wds1c.pk003.c6.f 3' end, mRNA sequence 

TGGAGTGGAGTGGACTGGAGT
 || |||||||||| ||||||
TCCACACCTCACCTCACCTCA

EST sequence (targeted fragment marked with yellow):
ACAGCCACTATAGGGCGAATTGGGTACCGGGCCCCCCCTCGAGTTTTTTTTTTTTTTTTTTTTTGAGAAAACAGATGTCCGTAGATATAATGAATCATGTCTTATCGACAAAATAAAAGGCATACATTATCTAGAGTGGCACTGCGTCGCTCGCTCGATGCTCACCGACAACACTTTTATTTAGCCCACGTCACGCGACCCCGCGCATAGCACTCCACTCCACTCCACACCTAGTAGAGTACAGTAGTAAAAAGTAGGACTCCAGTCCACTCCACTCCACTGGCTGAGCATCACGCCGTGCCACGTAGGAGCACACGGCCGCCGCCGTGGACGCTGACCCAGCCAGCTCCTCCTCCGCGCGCACCGGNGCCTCACACGCTGACGCTGGCCACGGNGTCGGCCGGCTCCTCTGCCGCGGGCGCGGGTGCCTCCTCCGCTGCAAGCCGGTGCTTCCTCGGNGACGGGCGGNAACTCCGGCTCGGGAAGCAAGGGGCGGCTCCTCCTTTAACTCCTCGANGACTGGCGGGTCTGGCTCTGGCANGGGCTCCT


gi|25443926|gb|CA722133.1|CA722133 wds1c.pk003.c6.f wds1c Triticum monococcum cDNA clone wds1c.pk003.c6.f 3' end, mRNA sequence 

TGGAGTGGAGTGGACTGGAGT
|||||||||||||| ||  .|
ACCTCACCTCACCTCACGATA

EST sequence (targeted fragment marked with yellow):
ACAGCCACTATAGGGCGAATTGGGTACCGGGCCCCCCCTCGAGTTTTTTTTTTTTTTTTTTTTTGAGAAAACAGATGTCCGTAGATATAATGAATCATGTCTTATCGACAAAATAAAAGGCATACATTATCTAGAGTGGCACTGCGTCGCTCGCTCGATGCTCACCGACAACACTTTTATTTAGCCCACGTCACGCGACCCCGCGCATAGCACTCCACTCCACTCCACACCTAGTAGAGTACAGTAGTAAAAAGTAGGACTCCAGTCCACTCCACTCCACTGGCTGAGCATCACGCCGTGCCACGTAGGAGCACACGGCCGCCGCCGTGGACGCTGACCCAGCCAGCTCCTCCTCCGCGCGCACCGGNGCCTCACACGCTGACGCTGGCCACGGNGTCGGCCGGCTCCTCTGCCGCGGGCGCGGGTGCCTCCTCCGCTGCAAGCCGGTGCTTCCTCGGNGACGGGCGGNAACTCCGGCTCGGGAAGCAAGGGGCGGCTCCTCCTTTAACTCCTCGANGACTGGCGGGTCTGGCTCTGGCANGGGCTCCT