| mature miRNA: TGGAGTGGAGTGGAGTGGAGT species: Triticum aestivum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|289683654|gb|GD188156.1|GD188156 Taw21-013-B01-A-009.g Triticum aestivum developing seed heat stress reverse subtractive libr TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): TAGACTGAAGAACAAACAACAAACCGGACTCAAAACACTGACACGAGAGACTCAAAACACTGACTGCAACATTGGACCATTCGCACGCACAGACGGCCGGACTCTTCTTGATTTTATTTTATCACGACGACCGGGGCGAGACTCCACGCCACTGCTCTGCACTCCACTTCATCGCTCTAGCCGGAGATCTGGATGGACTTGACCTCGGGCTTCTTGGCCTCCTCCTTGGGCACGGTGACGGTGAGCACGCCGTTCTCCATGGACGCCTTCACCTGCTCCGCCTTGGCGTTCTCCGGCAGCCGGAACCTGCGGAGGAACTTGCCGCTGCTGCGCTCCACGCGGACCTGCCCGGGCGGCCGCTCGAA | |||||||||
gi|222371513|gb|GH732891.1|GH732891 OV.114C01F010312 OV Triticum aestivum cDNA clone OV114C01, mRNA sequence TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): GGAGGTCCAGGCCGAGTTCATGGAGGGCGCCATGGCCGGCTCCACCTCCCTCTCCACGCCCGAGACCGAGGTCAACTCCCTCATGCAGCAGGTCGCCGACGACTACGGCCTCGAGGTCTCCGTCGGCCTCCCCCAGGCCGCAGCCCACGCCATCCCGGCCGCCAAGGACAAGGAGAAGGTCGACGAGGACGACCTCACCCGCCGCCTCGCCGAGCTCAAGGCCCGCGGCTGAACGACGGCTTTTTCACTTCACTTCACTTCAGGTACGGCTCATGCAATGTTCACTCGCTTCGCCGTCAGTTGTCAAGGGCTGCTCATATCTGACAGCCCCGTAAATATTGTTAACGCCCATGTGGGTGCTCTCTTGCCTGGGATCTCTATGTGGAACTGATTTAAACACTGCTGTGTGATATGACGTGTTATTCCGAAACGGAGTGTGATATTGATATTATGAGTCAGTAATAATACATGAGCTTGAG | |||||||||
gi|222368739|gb|GH728412.1|GH728412 G750.106L08F010529 G750 Triticum aestivum cDNA clone G750106L08, mRNA sequence TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): AGAGGCTCTTTGCCATTGTCCAGTCGATGCTGGTGTACACTGGCTTGGTCGAGCAGCTGCAGCAATTCTTCAAGAAGGGCAAATCATCTGGGACTAGCAAGTCAAGCCAGAAAGACGAAGCAAGCAGCAAGTGGGAGTCGACGATGAAAGAAAGGCTGAGCAACATGAAGGAGATGGTGGGACTATCAAAGGACCTGCTCTCATGGCTCGACGACATGACCTCGTCTGAAGATTTGCAGGAGGCCTTCGACGTCATGGGGGCGCTGCCAGACGTGTTCTCCAGTGGGTACACGAAATGTGATGATTTTGTCCGGGCTGCCATACAGGCTGGGAGGAGCTGAGCGGCCACAGCTCCACTCCACTCCACTGTTTGTGTTGATATAAGGCACGGCCCTTTTGGTATGGTATGATGATGTTGAGATAGGCAGCTTGTTTGTAGCAGCTGTAAACAGTCTAGCACTTGGAGATC | |||||||||
gi|289683362|gb|GD187897.1|GD187897 Taw21-009-C07-A-050.g Triticum aestivum developing seed heat stress reverse subtractive libr TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): TAGACTGATGAACAAACAACAAACCGGACTCAAAACACTGACACGAGAGACTCAAAACACTGACCGCAACATTGGACCATTCGCACGCACAGACGGCCGGACTTCTTGGTTTTATTTCATCACGACGACCGGGGCGAGACTCCACACCACTGCTCTGCACTCCACTTCATCGCACCTGCCCGGGCGGCCGCTCGAA | |||||||||
gi|289681676|gb|GD189807.1|GD189807 Taz21R-012-H05-A-046.g Triticum aestivum 10-day-old seeding heat stress forward subtractive TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): TAGACTGAAGAACAAACAACAAACCGGACTCAAAACACTGACACGAGAGACTCAAAACACTGACTGCAACATTGGACCATTCGCACGCACAGACGGCCGGACTCTTCTTGATTTTATTTTATCACGACGACCGGGGCGAGACTCCACGCCACTGCTCTGCACTCCACTTCATCGCTCTAGCCGGAGATATGGATGGACTTGACCTCGGGCTTCTTGGCCACCTGCCCGGGCGGCCGCTCGAAGT | |||||||||
gi|289683539|gb|GD188041.1|GD188041 Taw21-011-C02-A-006.g Triticum aestivum developing seed heat stress reverse subtractive libr TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): TAGACTGATGAACAAACAACAAACCGGACTCAAAACACTGACACGAGAGACTCAAAACACTGACTGCAACATTGGACCATTCGCACGCACAGACGGCCGGACTTCTTGGTTTTATTTCATCACGACGACCGGGGCGAGACTCCACACCACTGCTCTGCACTCCACTTCATCGCTCTAGACCTGCCCGGGCGGCCGCTCGAA | |||||||||
gi|289683917|gb|GD189109.1|GD189109 Taz21-001-G03-A-020.g Triticum aestivum 10-day-old seeding heat stress forward subtractive l TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): TCTAGTGTGGTCGCGGCCGAGGTACAGACTGATGAACAAACAACAAACGGGACTCAAAACACTGACACGAGAGACTCAAAACAACGATTGCAACATTGGACCATTAGCACGCACAGACGGCGGGACTGTTAAGGATTTTATTATATCACGACGACCGGGGCGAGACTACCACGCCCACTGCTCTGCACTCCACTTCATCGCTCTAGCCGGAGATGTGGATGGGCTAGACATCGGGATTGTAGGCCTCAACATAGGGCAAGGTGACGGTGAGCACTCGGTTCTGCAACATGTCGGGGGGGCCGCTGGAAT | |||||||||
gi|289682199|gb|GD188728.1|GD188728 Tau21-003-E07-A-051.g Triticum aestivum flower heat stress forward subtractive library Triti TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): AGACTGAAGAACAAACAACAAACCGGACTCAAAACACTGACACGAGAGACTCAAAACACTGACTGCAACATTGGACCATTCGCACGCACAGACGGCCGGACTCTTCTTGATTTTATTTTATCACGACGACCGGGGCGAGACTCCACACCACTGCTCTGCACTCCACTTCATCGCTCTAGCCGGAGGTCTGGATGGACTTGACCTCGGGCTTCTTGGCCTCCTCCTTGGGCACGACCTCGGCCGCGACCACGCTA | |||||||||
gi|289683080|gb|GD189728.1|GD189728 Taz21-002-E02-A-007.g Triticum aestivum 10-day-old seeding heat stress forward subtractive l TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): GTAGACTGATGAACAAACAACAAACCGGACTCAAAACACTGACACGAGAGACTCAAAACACTGACTGCAACATTGGACCATTCGCACGCACAGACGGCCGGACTCTTCTTGATTTTATTTTATCACGACGACCGGGGCGAGACTCCACGCCACTGCTCTGCACTCCACTTCATCGCTCTAGCCGGAGATCTGGATGGGCTTGACCTCGGGCTTCTTGGCCTCCTCCTTGGGCACGGTGACGGTGAGCACGCCGTTCTCCAACCTGCCCGGGCGGCCGCTCGAAAGCG | |||||||||
gi|289683657|gb|GD188159.1|GD188159 Taw21-013-B04-A-029.g Triticum aestivum developing seed heat stress reverse subtractive libr TGGAGTGGAGTGGAGTGGAGT EST sequence (targeted fragment marked with yellow): TAGACTGATGAACAAACAACAAACCGGACTCAAAACACTGACACGAGAGACTCAAAACACTGACTGCAACATTGGACCATTCGCACGCACAGACGGCCGGACTTCTTGGTTTTATTTCATCACGACGACCGGGGCGAGACTCCACACCACTGCTCTGCACTCCACTTCATCGCTCTAGCCGGAGATATGGATGGACTTGACCTCGGGCTTCTTGACCTGCCCGGGCGGCCGCTCGAA | |||||||||