| mature miRNA: TGTCCATCGCCAAGTTGCCAG species: Chlamydomonas reinhardtii database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161814983|gb|FC104296.1|FC104296 CACW4967.fwd CACW Chlamydomonas reinhardtii Strain S1D2 normal Chlamydomonas reinhardtii cDN TGTCCATCGCCAAGTTGCCAG EST sequence (targeted fragment marked with yellow): CTCGTATGAGCTGCGTGCGTTAAGTAGTGTTTCAGTTGCCGAGGCTTCAGCTTCTTGAGTTCCAAGCAAAGCTCTCTTTGCCTTGGAGGCTGAGGCTTGTGCCCCTACTAACCAAGCCAAGATGGCGATGTCGCAGCAGTCAGGTATTCTCTCACAAGGAGCAACGGAAGAACGCGGCGAGAATGCCCGTATGGCATCGTTTGTTGGAGCTGTCGCTGTAGCTGATCTGGTGAAGTCGACGCTTGGGCCGAAGGGCATGGACAAAATCCTGCAAAGTATGAGCCGCGGCCAGGAGGTGACCATCACAAATGATGGCGCCACCATCCTCAAGTCCATCTACGTGGACAACCCGGCCGCCAAGGTCCTCGTGGACATCAGCAAGGTGCAGGATGACGAGGTGGGCGACGGCACCACCAGTGTGGTGGTGTTTGCGGGCGAGCTGCTGCGCGAGGCGGAGCTGTTGGTCAACCAGAAGGTGCACCCCATGACCATCATCGCGGGCTACCGCGAGGCGTGCGACTGTGCTCGCGGCGTGCTGGAGACCGGCGCGTTCAACCACCAGTCCGACGCGGAGCAGTTCCGCCAGGACCTGCTCAACATCGCCAAGACCACACTGAGCAGCAAGATCCTCACAGTGGACAAGGAGCACTTTGCCAACCTGGCGGTGGACGCCATCATGCGCCTCAAGGGCAGCGGCAACCTGGAGGCCATCCACATCATCAAGAAGACGGGTGGCACGCTGCACGAGTCCTTCCTGGACGAGGGCTTCATCCTGGACAAGAAGATCGGCGTGGGGCAGCCCAAGCGCATTGAGAATGCGCGTATCCTGGTAGCCAACACGCCCATGGACACAGACAAGATCAAGATCTACGGCGCCCGGCGTGCGT | |||||||||