miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGTGGACAAGGCCAAGTCCGA
species: Chlamydomonas reinhardtii
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|34982091|gb|CF556008.1|CF556008 1115014B11.x2 C. reinhardtii CC-1690 (mt+), Stress III (normalized), Lambda Zap II Chlamydomo

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
CACAGAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTCCAGTCCAGCTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCACCGCGCTTAGCAGCGGCAGCACCGGTCTCCTCAACATCAACCGGGTCGTTGTCACCCGCGGCGCTCAGGGTGACGTCGGTGTGACCGGGGTCCTCCCAGGTCTGGGGCAGCATGCCGTAGTTCCAGTTGATGTTGTACGGGTAGAAGCGGAGCTTGCCCTTCTTCACGTCATGCTTGATGGGGGTGCGGGGCTCGTCCGTGGCGACCTCCATCTTGGCCGAGGTCTCCTTGGGGATCTCGCAGATGTAGTGCAGGTGGCCGTCACCGGCGTAAAGGGAAATATCGTGCCAGCACGACACCTCCTTGGCACCCTGCTTGAAGAACATGCGGTACTCCAGGGAGTCCTTGGGGCCCTTCTCCTCCACGCTGTAAGCAGTGATCTCAGCGCTGGCAGTGGTCACCGAGCGCACGCGTTGGGCGGGGGCGACGCGCACAGGCACGGCCTGGCGGAAGGCCTTGCGTCCCATCGCGCCCGCGCGCAGGGAGGAGCGGATAGCCAGGGCCATTTTGCTGGACAGATAGGAACTGACAGATTCCCTAGTCT



gi|15698828|gb|BI723133.1|BI723133 1031066B03.x2 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas rei

TGTGGACAAGGCCAAGTCCGA
.| |||||||||| ||||||
GCTCCTGTTCCGGAGCAGGCT

EST sequence (targeted fragment marked with yellow):
GGTACAAGGCCCCCCCTCGGCTTGGCCCTCCGCGCATCGGACTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATGTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCATGTCTGCGGCGGCCTCCTCCTTGATCTTGACCATCCGTGCCTCGGACTTGGCTTTTTCCTCCTCGAACCTGGCCTTCCGTGCCTCGGACGAGGCCTTGTCCTCGGCGAGCGCCTTCTGCATCTTGGCTTTGTCCTCCTCGAACCTGCCTCGGGC



gi|15699581|gb|BI723886.1|BI723886 1031068B02.x3 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas rei

TGTGGACAAGGCCAAGTCCGA
.| ||||||||||||| |||
GCTCCTGTTCCGGTTCTAGCT

EST sequence (targeted fragment marked with yellow):
CTTGGCCCTCCGCGCATCGGACTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATATTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCATGTCTGCGGCGGCCTCCTCCTTGATCTTGGCCATCCGCGCCTCGGACTTGGCTTTTTCCTCCTCGAACCTGGCCTTCCGTGCCTCGGACGAGGCCTTGTCCTCGGCGAACGCCTTCTCCATCTTGGCTTTTTCCTCCTCGAACCTGCCTCGTGC



gi|9027627|gb|BE237667.1|BE237667 894037C06.x1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDNA,

TGTGGACAAGGCCAAGTCCGA
|.|||||||||||||.||.|
TCGCCTGTTCCGGTTCGGGTT

EST sequence (targeted fragment marked with yellow):
TTTTTTACGCTTGCGATTTACATCACTGCCGTACATGGCTGGCAAGTTGCGCAAGCAGAGAGATGCAAGCACGCCGCTCTGCGACAAACCCAACAACATTGGGCGCTGTTAGCATCATCCTGCACATCAACACGGGCAGGCTGCATTGGCAGACCCTGCTCCATTTGCCCGTCCCCACCACAACGCCTGTTTCCTGCCAACCGAATTTGAGGGGACCTCCTGGGCATCTGTCTGTCGACCACACCAGCTCACACCGGGGCACGCCATCACGCCGTTCCGCACAGTACCACGTTCCATCTGACCACCAATAACCGGACACAAGCACTGCCATCCCCTGACTCTTTGCCGCCCGGCACTGCACCTCACTTTTTGCCGCCACCCACGCCGAACTTTCCTTTCTTGGCCGCCGCGCCGCCCTTGGCGTCCTTGCCGCCCGCCGCTGCGCCCGCTTTCCGCTTCTTGTCGTCCTCCTTGGGCTTGGCCTTGTCCGCTGTGGCGGGCTTGGGCAGC



gi|22054222|gb|BQ811247.1|BQ811247 1030021E11.x2 C. reinhardtii CC-1690, Deflagellation (normalized), Lambda Zap II Chlamydomona

TGTGGACAAGGCCAAGTCCGA
.|.|||||||||||||. ||
GCGCCTGTTCCGGTTCGTCCT

EST sequence (targeted fragment marked with yellow):
TTTTTTAAGCGACAATTAATTACACATGAATGCACATTTCAGCCCAATTCAAAACGTCCATCGGTGTCAGGCTAGGCAGCGACAGACGACTCGACACTGACTACGTGGCCCCCTCCGTATCCTCGCACGCGCTCGCTCGGTGTTGCCCCCCGCCGACCACCTCATGCGCTCGTGGACAGCGGCGCCTCCTGCTTGGCCTTGTCCGCGTTGCCGCTGCCGCTGTCGTGCTCCAGCGCCAGTTTGAAGACCTGGTCGTAGCTGCTCACGAAGTGCGGCTCCAGACCCTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTGCGTGTACGTGTACGTGTACGTGTGCGTGTGCGTGTGCGAGTGTGTGGGTGTGTGACATGAAGGATGGACACTGGGTGAGGCGCGCCGGCAGGACGCCACC



gi|23358114|gb|BU645934.1|BU645934 1112034D02.x1 C. reinhardtii CC-1690 (mt+), CC-1691 (mt-), Gamete (normalized), Lambda Zap II

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
TTTTTTACGTCTGCGGGGGTTACACGCATGTAGTGCACGCGCACGCACAGGCGCAGAGGAAAAACTTCCGTGCATATGGTACGGAACCTGTGCTGCAACCATGCACCGCTGATATCACCGCAACGCTACGACCAGCACACGCCGCGCATGCTGTTATGCACAAGACGCCAAATCAAAAAGCGAACACCAGGTCCCGGCAGCCCCACCAGCCACTGCGGCGCATTAGACCTCAAGCTGCATCACACGGGGTTACTTAGATCAGGGACAGCTCCTCAGAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGTGGGTCTCCTTGATCACGTTCAGGGTGAACTCCTTGTTCATGCACTTGTTGTCGTAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTCTGGATCTCACCCGGGAAGTGCTTCTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTCCAGTCCAGCTCGACGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCCGCGCTTAGCAGCGGCAGCACCGATCTCCACAACATCAACCGGG



gi|14239572|gb|BG858388.1|BG858388 1024057D08.x1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDN

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
TTTTTTCGCCTGCGGGGGTTACACGCATGTAGGGCACGCGCACGCACAGGCGCAGAGGAAAAACTTCCGTGCATATGGTACGGAACCTGTGCTGCAACCATGCACCGTTGATATCCCCGCAACGCTACGACCAGCACACGCCGCGCATGCTGTTATGCACAAGACGCCAAATCAAAAAGCGAACACCAGGTCCCGGCAGCCCCACCAGCCACTGGGGCGCATTAGACCTCAAGCTGCATCACACGGGGTTACTTAGATCAGGGACAGCTCCTCAGAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGGGGGTCTCCTTGATCACGTTCAGGGGGAACTCCTTGTTCATGCACTTGTTGTCGAAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTTTGGATCTCACCCGGGAAGTGCTTTTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTCCAGTCCAGCTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCCGCGCTTAGCAGGGGCAGCACCGATCTCCACAACATCAACCGGGTCGTTGTCACCCGCGGCGCCCAGGGTGG



gi|15699581|gb|BI723886.1|BI723886 1031068B02.x3 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas rei

TGTGGACAAGGCCAAGTCCGA
.| ||||||||||||||||||
GCTCCTGTTCCGGTTCAGGCT

EST sequence (targeted fragment marked with yellow):
CTTGGCCCTCCGCGCATCGGACTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATATTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCATGTCTGCGGCGGCCTCCTCCTTGATCTTGGCCATCCGCGCCTCGGACTTGGCTTTTTCCTCCTCGAACCTGGCCTTCCGTGCCTCGGACGAGGCCTTGTCCTCGGCGAACGCCTTCTCCATCTTGGCTTTTTCCTCCTCGAACCTGCCTCGTGC



gi|23361717|gb|BU649537.1|BU649537 1112081B04.x1 C. reinhardtii CC-1690 (mt+), CC-1691 (mt-), Gamete (normalized), Lambda Zap II

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
TTTTTTCGTCTGCGGGGGTTACACGCATGTAGTGCACGCGCACGCACAGGCGCAGAGGAAAAACTTCCGTGCATATGGTACGGAACCTGTGCTGCAACCATGCACCGCTGATATCCCCGCAACGCTACGACCAGCACACGCCGCGCATGCTGTTATGCACAAGACGCCAAATCAAAAAGCGAACACCAGGTCCCGGCAGCCCCACCAGCCACTGCGGCGCATTAGACCTCAAGCTGCATCACACGGGGTTACTTAGATCAGGGACAGCTCCTCAGAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGTGGGTCTCCTTGATCACGTTCAGGGTGAACTCCTTGTTCATGCACTTGTTGTCGTAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTCTGGATCTCACCCGGGAAGTGCTTCTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTCCAGTCCAGCTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCCGCGCTT



gi|15698828|gb|BI723133.1|BI723133 1031066B03.x2 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas rei

TGTGGACAAGGCCAAGTCCGA
.| ||||||||||||||||||
GCTCCTGTTCCGGTTCAGGCT

EST sequence (targeted fragment marked with yellow):
GGTACAAGGCCCCCCCTCGGCTTGGCCCTCCGCGCATCGGACTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATGTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCATGTCTGCGGCGGCCTCCTCCTTGATCTTGACCATCCGTGCCTCGGACTTGGCTTTTTCCTCCTCGAACCTGGCCTTCCGTGCCTCGGACGAGGCCTTGTCCTCGGCGAGCGCCTTCTGCATCTTGGCTTTGTCCTCCTCGAACCTGCCTCGGGC



gi|161817235|gb|FC101604.1|FC101604 CACW3036.rev CACW Chlamydomonas reinhardtii Strain S1D2 normal Chlamydomonas reinhardtii cDN

TGTGGACAAGGCCAAGTCCGA
.||| |||||| ||||| |||
GCACATGTTCCTGTTCAAGCT

EST sequence (targeted fragment marked with yellow):
CACTCGCCATCTTCTTACAGAGCTCCGGCTGCCGCTGGCGCCGCTCGCTTCCGCCCGGCCTGAGCCCCACGCTCAGACCTTTCTTGCCTCTGAGACCGCGGCCGCTCCCTCCACGNTGCACCGCCACGCCGACCGTGCAAGCTACTCAGTCGAGCACAAGAGGCATGGGTGGTCAGCTGCCGGGCGGCGCACAGGACCCGCCCCCTGCGCCGCCCTGGAGGCGCCACAGCGGCCGCTTAGGCGGACTTGTTGGCGGGGGTCCAAGACTCGTACTTGCGCCAGTTGCGCGGCTTGGCGTTGAACCAGGAGCCCTTGGGGTTGTAGCAGGTCTGCGTGCCGGTCTTGGTCATGGAAGCCTCGATCTGGTAGGTGGGCTGCTTGAACTGCGTGTTCGTGGGGTTGTAGTCGTTGATGTAGTTAAGCCAGCCGTGCCACTCGGGCGGGATGGTGGTGGGGTTGTAGTCGAACTTGTCCTTGTACACGATCCAGCGCCGCCGGCCGTAGGCCGCCTCCTCGTTCTCGTAGTACCGGTTGCCGTTGTAGTCGGTGCCCACCAGCCGCCCAGCACCCGTGGCGCGGACCAGCACGTTGTGCGCAAGGTTGCCATCTACCAGCATCTTGCCGAACTCCCACGATGCGAAGAAGGACCCGACCGACTTCTTGCCGGAGGCCTCCAGCAGGCGACTGAAGTAGCCCGAAAGCGACATGGCTACACTGTTTGAAGGAAAATGGCTCGAGGCCGCTAACCAAGAGAGTGTGCAGAGAAAGGGTCGTTCACGCTGCGGTCCTTTCACGTCGTTTGGGCCTATCGACCGTTTCAC



gi|14238196|gb|BG857012.1|BG857012 1024049D04.x1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDN

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
TTTTTTACGGCTGCGGGGGTTACACGCATGTAGTGCACGCGCACGCACAGGCGCAGAGGAAAAACTTCCGTGCATATGGTACGGAACCTGTGCTGCAACCATGCACCGTTGATATCCCCGCAACGCTACGACCAGCACACGCCGCGCATGCTGTTATGCACAAGACGCCAAAAAAAAGCGAACACCAGGTCCCGGCAGCCCCACCAGCCACTGGGGCGCATTAGACCTCAAGCTGCATCACACGGGGTTACTTAGATCAGGGACAGCTCCTCAGAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGTGGGTCTCCTTGATCACGTTCAGGGTGAACTCCTTGTTCATGCACTTGTTGTCGTAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTCTGGATCTCACCCGGGAAGTGCTTCTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTTGGGTCGGTAGTGGAGATGGCGATGACCTTTCAGTCCAATTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCGCGGGCTTAACAGCGGGCAGCACCTGATTTTCACAAAAATAAACCGGGTTGGTTTGTCACCCCCGCGGGCGCCCAGGGAAGGCGGTAGGTGTGGCCCGGGGGTCCTCCCAGAGAATTGGGAGCAACTATAN



gi|161801646|gb|FC092588.1|FC092588 CACW23056.rev CACW Chlamydomonas reinhardtii Strain S1D2 normal Chlamydomonas reinhardtii cD

TGTGGACAAGGCCAAGTCCGA
||||| ||||||||| ||.|
CCACCTCTTCCGGTTCCGGTT

EST sequence (targeted fragment marked with yellow):
GGCATGCCTGCGCCGCCGAGCCCCAACTGTGAAGCGCTCACCGTGACGGCTGTTAGGCCCGAGCCACGCGCCCCTGGGCCCAGGCGACCGACCCGCCGCTCCTTGCCGCCGCCACTCCTCACCGCTGCCACTCCTTCAGAGCCACCCCGCGCTGATACCACCACACCGGATCCGCCGCTTACAGGCCCTTCAGGCTGGTCGCCAGGCCAGACGCGTCGGCCCAGCTCTGCAGGTCCGATACCAGGCTCACGTACGCGCGCTTGGAGCCGGCGGCGTCGCCCTTGGCGGCGGCGGCCTGCACGCTCTTGATGGCCTCCACCAGCTTGCCGGCGGTGGTGCTGCCGGACACGGTGGAGGCGACGGTGCTGAAGTCGCCCACCCAGGACTCGGACAGGGTGCTGGCCGCGCCCTTCAGGTCGCCGCTCTCCAGCTGGCTGCCGCTCTTGGCCAGCTTGTACACGGCCTTCTGCACCGGCACCAGCTCCTGCTCCAGGCGGCGGTCGGTCAGGTTCTCGCTGGCCATGAAGTCGCGGGTCACGCCGCGCTGCTGCGCCAGGCGGGCGCGGCGGTTGGCCTTGGCCTTCTCCACCAGGTCCTCATCCTCCTCGTCAGGAATCAGGGCCAGAGCCTTGGGGGCATACATCAGCGCGGGCAGCAGCGCCACGCCCAGAATAGCACGACGCGAGGCGGTGTTGGGGGTCGCCTGCGCGACCACCTTCATGCCCCGGCGAGAGACCGGAGCAGCAACCTTCTGCATCATGAGGGCCATGCTGTCTGACTACTTGTGG



gi|161816877|gb|FC101363.1|FC101363 CACW2892.rev CACW Chlamydomonas reinhardtii Strain S1D2 normal Chlamydomonas reinhardtii cDN

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
GGATCTCACCCGGGAAGTGCTTCTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTCCAGTCCAGCTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCCGCGCTTGGCAGCGGCAGCACCGATCTCCACAACATCAACCGGGTCGTTGTCACCCGCGGCGCCCAGGGTGGCGTCGGTGTGGCCGGGGTCCTCCCAGGTCTGGGGCAGCATGCCGTAGTTCCAGTTGATGTTGTACGGGTAGAAGCGGAGCTTGCCCTTCTTGACGTCCTGCTTGATGGGGGTGCGGGGCTCGTCCGTGGCGACCTCCATCTTGGCCGAGGTCTCCTTGGGGATCTCGCAGATGTAGTGCAGGTGGCCGTCACCGGCGTACAGGGGGATCTCGTGCCAGCACGACACCTCCTTGGCACCCTGCTTGAAGAACATGCGGTACTCCAGGGAGTCCTTGGGGCCCTTCTCCTCCACGCTGTAAGCAGTGATCTCAGCGCTGGCAGTGGTCACCGAGCGCACGCGCTGGGCGGGGGCGACGCGCACAGGCACGGCCTGGCGGAAGGCCTTGCGGCCCATCGCGGCCGCGCGCAGGGAGGAGCGGATAGCCAGGGCCATTTTGCTGGACAGATAGGAACTGACAAGTTCCTGATCTGG



gi|15698828|gb|BI723133.1|BI723133 1031066B03.x2 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas rei

TGTGGACAAGGCCAAGTCCGA
.| ||||||||||||| |||
GCTCCTGTTCCGGTTCTAGCT

EST sequence (targeted fragment marked with yellow):
GGTACAAGGCCCCCCCTCGGCTTGGCCCTCCGCGCATCGGACTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATGTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCATGTCTGCGGCGGCCTCCTCCTTGATCTTGACCATCCGTGCCTCGGACTTGGCTTTTTCCTCCTCGAACCTGGCCTTCCGTGCCTCGGACGAGGCCTTGTCCTCGGCGAGCGCCTTCTGCATCTTGGCTTTGTCCTCCTCGAACCTGCCTCGGGC



gi|34990023|gb|CF563940.1|CF563940 1115088C05.y1 C. reinhardtii CC-1690 (mt+), Stress III (normalized), Lambda Zap II Chlamydomo

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
GCACGAGGGTTACACGCATGTAGTGCACGCGCACGCACAGGCGCAGAGGAAAAACTTCCGTGCATATGGTACGGAACCTGTGCTGCAACCATGCACCGCTGATATCCCCGCAACGCTACGACCAGCACACGCCGCGCATGCTGTTATGCACAAGACGCCAAATCAAAAAGCGAACACCAGGTCCCGGCAGCCCCACCAGCCACTGCGGCGCATTAGACCTCAAGCTGCATCACACGGGGTTACTTAGATCAGGGACAGCTCCTCAGAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGTGGGTCTCCTTGATCACGTTCAGGGTGAACTCCTTGTTCATGCACTTGTTGTCGTAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTCTGGATCTCACCCGGGAAGTGCTTCTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTCCAGTCCAGCTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCCGCGCTTAGCAGCGGCAGCACCGATCTCCACAACATCACCCGGGTCGTTGTCACCCGCGGC



gi|14237989|gb|BG856805.1|BG856805 1024048C10.x1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDN

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
TTTTTTGTTACGTCTGCGGGGGTTACACGCATGTAGTGCACGCGCACGCACAGGCGCAGAGGAAAAACTTCCGTGCATATGGTACGGAACCTGTGCTGCAACCATGCACCGTTGATATCCCCGCAACGCTACGACCAGCACACGCCGCGCATGCTGTTATGCACAAGACGCCAAATCAAAAAGCGAACACCAGGTCCCGGCAGCCCCACCAGCCACTGCGGCGCATTAGACCTCAAGCTGCATCACACGGGGTTACTTAGATCAGGGACAGCTCCTCAGAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGTGGGTCTCCTTGATCACGTTCAGGGTGAACTCCTTGTTCATGCACTTGTTGTCGAAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTCTGGATCTCACCCGGGAAGGGCTTCTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTCGGGTCGTTAGCGGAGATGGCGATGACCTTCCAGTCCAGCTTGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCCGGGCTTAGCAGCGGGAGCACCCGATCTCCACAACATCAACCGGGTCGGTTGCCACCCCGCGGCGCCCAGGGGTGCAGTTTAGATGTGGCCCGGGGGTCCTC



gi|15699581|gb|BI723886.1|BI723886 1031068B02.x3 C. reinhardtii CC-1690, Stress II (normalized), Lambda Zap II Chlamydomonas rei

TGTGGACAAGGCCAAGTCCGA
.| |||||||||| ||||||
GCTCCTGTTCCGGAGCAGGCT

EST sequence (targeted fragment marked with yellow):
CTTGGCCCTCCGCGCATCGGACTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATATTGGCCTTGTCCTCGGCGGCCGCCTTCTCGATCTTGGCCATGTCTGCGGCGGCCTCCTCCTTGATCTTGGCCATCCGCGCCTCGGACTTGGCTTTTTCCTCCTCGAACCTGGCCTTCCGTGCCTCGGACGAGGCCTTGTCCTCGGCGAACGCCTTCTCCATCTTGGCTTTTTCCTCCTCGAACCTGCCTCGTGC



gi|15372959|gb|BI532385.1|BI532385 1024121C04.x1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDN

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
TTTTTTAAGTCTGGGGGGGTTACACGCATGTAGTGCACGCCCACGCACAGGCGCAGAGGAAAAACTTCCGTGCATATGGTACGGAACCTGTGCTGCAACCATGCACCGTTGATATCCCCGCAACGCTACGACCAGCACACGCCGGGCATGCTGTTATGCACAAGACGCCAAATCAAAAAGCGAACACCAGGTCCCGGCAGCCCCACCAGCCACTGGGGGGCATTAAACCTCAAGCTGCATCACACGGGGTTACTTAAATCAGGGACAGCTCCTCAAAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGGGGGTCTCCTTGATCACGTTCAGGGGGAACTCCTTGTTCATGCACTTGTTGTCGTAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTCTGGATCTCACCCGGGAAGTGCTTTTCCACGTCCTCGACGTCGTTGCACAAAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTCCAGTCCAGCTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCCGCGCTT



gi|23365762|gb|BU653582.1|BU653582 1112107F04.x1 C. reinhardtii CC-1690 (mt+), CC-1691 (mt-), Gamete (normalized), Lambda Zap II

TGTGGACAAGGCCAAGTCCGA
|.|||||||||||||.||.|
TCGCCTGTTCCGGTTCGGGTT

EST sequence (targeted fragment marked with yellow):
TTTTTTACGCTTGCGATTTACATCACTGCCGTACATGGCTGGCAAGTTGCGCAAGCAGAGAGATGCAAGCACGCCGCTCTGCGACAAACCCAACAACATTGTGCCGCTGTTAGCATCATCCTGCACATCAACACGGGCAGGCTGCATTGGCAGACCCTGCTCCATTTGCCCGTCCCCACCACAACGCCTGTTTCCTGCCAACCGAATTTGAGTGGACCTCCTGGGCATCTGTCTGTCGACCACACCAGCTCACACCGGTGCACGCCATCACGCCGTTCCGCACAGTACCACGTTCCATCTGACCACCAATAACCGGACACAAGCACTGCCATCCCCTGACTCTTTGCCGCCCGGCACTGCACCTCACTTTTTGCCGCCACCCACGCCGAACTTTCCTTTCTTGGCCGCCGCGCCGCCCTTGGCGTCCTTGCCGCCCGCCGCTGCGCCCGCTTTCCGCTTCTTGTCGTCCTCCTTGGGCTTGGCCTTGTCCGCTGTGGCGGGCTTGGGCAGCGAGGTAAAGAAGGACTCGAGGCGGCCCTGGTTGGCCTTGGTCTTGTTGGCCTTGATTCGCCCCACCGCGTTGCGCACGCGCTGCTCGTTGAACTGCTTCTCGTTCACCAGGAAC



gi|23365147|gb|BU652967.1|BU652967 1112103E10.x1 C. reinhardtii CC-1690 (mt+), CC-1691 (mt-), Gamete (normalized), Lambda Zap II

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
TTTTTTCCGTCTGCGGGGGTTACACGCATGTAGTGCACGCGCACGCACAGGCGCAGAGGAAAAACTTCCGTGCATATGGTACGGAACCTGTGCTGCAACCATGCACCGCTGATATCCCCGCAACGCTACGACCAGCACACGCCGCGCATGCTGTTATGCACAAGACGCCAAATCAAAAAGCGAACACCAGGTCCCGGCAGCCCCACCAGCCACTGCGGCGCATTAGACCTCAAGCTGCATCACACGGGGTTACTTAGATCAGGGACAGCTCCTCAGAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGTGGGTCTCCTTGATCACGTTCAGGGTGAACTCCTTGTTCATGCACTTGTTGTCGTAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTCTGGATCTCACCCGGGAAGTGCTTCTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTTCAGTCCAGCTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACA



gi|161816878|gb|FC101364.1|FC101364 CACW2892.fwd CACW Chlamydomonas reinhardtii Strain S1D2 normal Chlamydomonas reinhardtii cDN

TGTGGACAAGGCCAAGTCCGA
|||| |||||| ||||.|||
ACACATGTTCCAGTTCGGGCA

EST sequence (targeted fragment marked with yellow):
CACGGCTGCGAGGGTTACACGCATGTAGTGCACGCGCAAGCACGGGCGCAAAGGAAAAACTTCCGTGCATTAGGTACGGAACCTGGGCTGCAACCGTACACCGGTGATAGCCCCGCAACGCTACGACCAGCACACGCCAGGCATGCTGCTATAAACAAGACACCACACAAAACGCGAACACCAGGTCCCGGCAGCCGCACCAGCCGCTGCGGCGCAAACGACCTCAAACTGCATCACAAGGGGTTACTTAAATCAGGGACAGCTCCTCAAAGTTGGCGCGGGCGCCCGACTTGAGCTTGACGTAGGCCTCGTGGGTCTCCTTGATCACGTTCAGGGTGAACTCCTTGTTCATGCACTTGTTGTCGTAGCCAAACTTGTTGGCGGGCTTGCCGTCAGGGATTTTGTAGTCCCGGAACCACTCCAGGACCTTCTGGATCTCACCCGGGAAGTGCTTCTCCACGTCCTCGACGTCGTTGCACAGAGCCGCCTTCGGGTCGTCAGCGGAGATGGCGATGACCTTCCAGTCCAGCTCGCCGTCGTCGATCATGGCCAGCACGCCCACGGGCTTGACCTTGTACACACCGCCACGCTTGGCAGCGGCAGCACCGATCTCCACAACATCAACCGGGTCGATGTCACCCGCGGCGCCCAGGGTGGCGTCGGTGTGGCCGGGGTCCTCCCAGGTCTGGGGCAACATGC