| mature miRNA: TGTGGGTGGGGTGGAAAGATT species: Solanum lycopersicum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|261465875|gb|GT165208.1|GT165208 M82T1_05_E24_M13R LA3475 Type I trichomes Solanum lycopersicum cDNA, mRNA sequence TGTGGGTGGGGTGGAAAGATT EST sequence (targeted fragment marked with yellow): GAAACCCCCAATTTTGGGTCCATTCCATTGCCCCAAAAAAAATTGAACGGGGGACCCCAAAAAGGCCCAAAAATTTCCAAATTCCACCCAACAAAATTTTTCCCCCCCCCCACAAAAAAAAAATTTGGGAAAGGAAAAAAAGGAAAAGGGGAAAAAAAAACCCGAAAAAAAAAGAAAAAAAACCACCCCCAAAAGGGTTGGGGGAACGGCCCAATTTTAAAAAGGCCCTGGGGGCCCCCAACCCGGGAACCCCCCCGGGCCCCCAGGGGTCTTTAAAAAAGGCGGGGAGGGGCCCCCCCGCCCAAAAGGCCCAAATCCCGGGGAAAAGGCCGGGACCCCCCACCGAAAACCTCCTAAAAAGGAGGCCAAACAAAATTTTGGGGGCCCCTCCCCCCCCACAAAACCCCCGCCCCCGGGCGTTCGGGGGGGGGGAACCAACCCCCCAAAAGGGGGCCAAAAAAAAAACCACCGGCCCCCCTTTTACCCCCCGAAGGGGGGAAAACGGGTTTCCCCCAAAACCGGGGAAAACCCCGGAAAAAAAATGGGAACAAAAGGCCCCCCAAAGGGCCCAAACCCAAAAAAGGGCCCCTTGCGGGGGTTTTTCCAAAAGGCCCCCCCCCCCGAAAAACCACCCAAAAATCCACCCCCAAAACAAAAGGGGGCAAACCC | |||||||||
gi|117686043|gb|DB701964.1|DB701964 DB701964 Solanum lycopersicum cv. Micro-Tom leaf Solanum lycopersicum cDNA clone LEFL1075BB0 TGTGGGTGGGGTGGAAAGATT EST sequence (targeted fragment marked with yellow): CAGAGGGTTTAAGCTTCACAGCCATGGAAGAAGAAGAACCCATACAAAACCTCTGGCAAGAAGTTCGAGATTTAACCCTAGGCATCTCAACCCAAATCAACCATCTCTCTACCCCACCCACCCCTCTCCAATTCCTCCGTGAATACGTTTCCCCCAACAAGCCTTGCCTCATTTCCAACGCCGTAAACCACTGGCCAGCCACCACTCTGTGGCAATCAACTCATTATCTAACCAATACACTCTCTTCTTCCAGTGTTTCACTTCATCTTACTCCTACAGGCCGTGCTGATGCACTTTCCCCAAACCCCATTTCCCCTTCTTCACTCTGCTTCGCTTCTGCTGAAGTGAAGCATCTTCCTTTTCCTGATGCGTTGAACCGGGTATTGGAATCGGAGATGGGTTGTGTGGGTTATTTGCAGCAGCAGAATGATTGTTTTCGGAGTGAGTATGGGGCGTTGAGTAAAGATTGTGATTCTGATTTTGGTTGGGCTTCTGAGGCTTTTGGGTGTTTACCTGAAGCGGTGAATCTTTGGATTGGGAATGAGTTGTCTGAGACTTCGTTTCATAAGGATCATTATGAGAATATTTATGCTGTTGTCTCTGGGGAGAAGCATTTTTTGCTTCT | |||||||||