miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGTGTTCTCAGGTCACCCCTT
species: Theobroma cacao
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|212107072|gb|CU478124.1|CU478124 CU478124 COPHAS_KZ0AAL Theobroma cacao cDNA clone KZ0AAL7YP06FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCTGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTGCAACTACTGTGACTGGTAATATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGC



gi|212325068|gb|CU534244.1|CU534244 CU534244 TEGPULI_KZ0AAI_K Theobroma cacao cDNA clone KZ0AAK1YH01, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
ACACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCAGAATAATACATGCGGTTGGTGATGCGATGGCCTCGAGAGTAACTTTTATGTGAAGTTGAGACTTTGTGAATAAAAAGAAAAAGAATCCTTGTTGTCTAAAAAAAAAAAAAAAA



gi|215532111|gb|CU586265.1|CU586265 CU586265 OVULEI_KZ0AAB Theobroma cacao cDNA clone KZ0AAB9YG24FM1, mRNA sequence

TGTGTTCTCAGG-TCACCCCTT
.||||.|.|||| |||||||||
GCACAGGGGTCCTAGTGGGGAA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTACAATTGCAGTGCTTATAATTTAAGAAAATTAAACAGGTAATAGTATTACCCCTATATTAGAGTAACAATTTCCTTGAGTAGATCCATCATCATATATAAAATACAACAGACAACACGTGAAAACCGCCAAACAACATTCCCTACTCCTAACCAGCTACATGCCTTTCATCATCTCTTCTTTTCTCACAGTCGAATCCAAGAAAGATTTTTCTTTCTTCCTTTCTTCTTACCCTCCGAAATAAAATATAAAGGCAGGGAATGAGCTTTTTCCCTTACCATAGAAAAAGAAACCACCGCCATTTTTTATTCGCATCCGCGTGGGGTAAACCCGATCCGAGAACCCGCTAAATCATAAGAGACCCGGAATCCCTGCTGCTGGATATTTCCAATTATGGACAACCCGCTCATGGTGCCCGCGAAAGCAAAGCAAAATGTCCCGCTGCCATCAACCGGAATCAAATAATTCGTCGCCGGCAATGACACGTCCGCTCCTCTAAAATGCAGCACCACCGTCGGCACCTTAACGGAAGTCTTCCCTGACAAGTCGAAACACGTGTCAAACAATGAGAAATCAGGCGCCCCCTTCAGATTTGAAGCTCCGATCCGGAACGCATCCCTCATTGCGATATAAGCGGGTCGGGTCAAGCGGGTGACGGACGTGCCTGAGTCGATGATGACCCCTCCGTTACCGGCTTGGTCCATTTTGAACAAGGAAGGGGTGATCCTGGGGACACGTATTCCACCGACACTGATCCCAAGCAGTTCAAT



gi|211994415|gb|CU504585.1|CU504585 CU504585 PODMEUPA_KZ0ACAB Theobroma cacao cDNA clone KZ0ACAB1YL15FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACCACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCACGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCATATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGTGGCAGAGTAGATTGCGGTATAATTGGTC



gi|212321796|gb|CU534514.1|CU534514 CU534514 TEGPULI_KZ0AAI_K Theobroma cacao cDNA clone KZ0AAK2YN21FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCAGAATAATACATGCGGTTGGTGATGCGATGGCCTCGAGAGTAACTTTTATGTGAAGTTGAGACTTTGTGAATAAAAAGAAAAAGAATCCTTGTTGTGTACTTTTGTTGTCTGTTTTGTGACTTGAAAGAGCCCTCTCCTCACTGCCGCTTTTAAAGTTTAAAGTGGTTCCTCCGTGTGCTGAATG



gi|38500392|gb|CF974632.1|CF974632 PSU_nupup1.2G01 Defense-related ESTs from Cacao Leaves Theobroma cacao cDNA, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
.|| ||||||||.||||| |.
GCAAAAGAGTCCGGTGGGTAG

EST sequence (targeted fragment marked with yellow):
ACGACTCTGGGAACTTGAACCACCACCACCAACAACCTGCGACGGCTTCAACTCATCACCAGCAAACAAAGGCAGCGGATGCGATGATGAGCGGTCACGATTGAAAGATGAGTTGCTTTGAACCGTAGCAGGGATTCTCCATAATCCCAGTGGGCTGCCATTGATGGGTGGCCTGAGAAAACGAGCCGTGGTTCCCATAAAACCTACTGCTACTACTGCTAATGCTATTGTTCCATGAAGGGTAAGTCATGGCTGGCGNTGNAGCTGAGCCCAGCCTGTAGCTAACNGAGGCCATAAATATGAGCCATCGGATAAAGAGTTGTGCACCATTGCCCGGACTGAAGATGAGCCTCGCTTGGCA



gi|212160817|gb|CU519583.1|CU519583 CU519583 SEEDNAB_KZ0ABH Theobroma cacao cDNA clone KZ0ABH6YD05FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGCTTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGTCTTACCTGTGATCAACTTAAGTTCATTTCTGAAAGTTGTTGCACCATATAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGAAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCAGAATAATACATGCGGTTGGTGATGCGATGGCCTCGAGAGTAACTTTTATGTGAAGTTGAGACTTTGTGAATAAAAAGAAAAAGAATCCTTGTTGTGTAAAAAAAA



gi|211991759|gb|CU496375.1|CU496375 CU496375 LESSHMEPNGa_KZ0ACAP Theobroma cacao cDNA clone KZ0ACAP1YB02FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAGAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAATGCTGAAGTCTCTTATCCGGGG



gi|211991959|gb|CU496470.1|CU496470 CU496470 LESSHMEPNGa_KZ0ACAP Theobroma cacao cDNA clone KZ0ACAP1YI10FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCAGAATAATACATGCGGTTGGTGATGCGATGGCCTCGAGAGTAACTTTTATGTGAAGT



gi|211980626|gb|CU480002.1|CU480002 CU480002 COPHAS_KZ0AAL Theobroma cacao cDNA clone KZ0AAL6YP06FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAAACACTGGAAATGCTGGTGGC



gi|215529542|gb|CU587019.1|CU587019 CU587019 OVULEI_KZ0AAB Theobroma cacao cDNA clone KZ0AAB2YE11FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGAGACACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCCGAATAATACATGCGGTTGGTGATGCGATGGCCTCGAGAGTAACTTTTTTGTGAAGTTGAGACTTTGTGAATAAAAAGAAAAAGAATCCTTGTTGTGTACTTTTGTTGTCTGTTT



gi|211979996|gb|CU479795.1|CU479795 CU479795 COPHAS_KZ0AAL Theobroma cacao cDNA clone KZ0AAL5YH19FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACT



gi|218178439|gb|CU616369.1|CU616369 CU616369 TPFERMI_A_KZ0AAN Theobroma cacao cDNA clone KZ0AAN8YC10FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||.|||||||.|| |||||
ACATAAGAGTCTAGGAGGGAA

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTAAGTCACACGAGTTTTATTATTTCGAAAATTTCTAACAATAACAGGTAGATTCATTCTTTGTCGTCTTTTAGCAGGGACAAGCGCTATGCTCTTATTTGGCAAAATACAATAACATGGCTGAAAACCCTTCTCCTACAGATTTTCAGCATCTCTTTAGTTAAAGTTGATTGGGTATTTGGGCTGCTTATTTGGTAGAAAGAGTCCCCAGTGTCTTTCGATTTCTTCACCCTGTTTGTTATTCTCATCAAACATGGCAAAAATATAGGCTTCTATAGGCTTTCCAGGCTTCTTTGGCGTCCCTCCTTTTACATGCTGGATCAAGTTCTGGTTATAAGTTCTTGCATTATCAATATTTGTTGCTCCTCGTTTCCTACCTCCAGCTGAAGGCCATCCACTCCCCGATACAACAATCTCCAAAGAACCCCCACCAACTTTCTCCAGGGCAGCGTAAACAGCATCCAAGATGGCATCAAAAAGGTTACGAATATGCAAGGGAGGATCTGAGAATACAGGATTTTGAGCTTTGA



gi|296178784|gb|FC072078.1|FC072078 EST00086 Theobroma cacao-Moniliophthora perniciosa pods incompatible interaction library The

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CCGGGGACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATACAAAAATGGTGAAGGCTGTTGCCGTGCTTATTAGCAGTGAATGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGAGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACGAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATG



gi|212096032|gb|CU480799.1|CU480799 CU480799 CORTEXS_KZ0AAT Theobroma cacao cDNA clone KZ0AAT11YG03FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||||| ||||||| |||||
ACACAAAAGTCCAGCGGGGAC

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTGCAAATATGACCTCCAATAATGAATAAACCTGGCAGTACAAAACTTGAATACATAATGAAAGGGCTATAAACCCAACCAGCAAACACACACAGAAAAACATACTGCCCCTAACGTAATCCATCAGCCATCAGTCAGAAAGAAGGACCTCCCTTGCAATATCATGCGCAGCTTCACCGAAATAGGACTGTTAATGCTGGTGAGTGACGAAACTCCAATCATCCCTGCATCTCCTTTTCAAATCAATATGGCTATCAAAATGAAGTGTGACACAATCAAAAGGTGAAGGAAAGCCCTGCAGGGGCGACCTGAAAACACATCAAAACACACAGGATAAGGTTTGTCCTTCAAGAATGGCCACATGTGTTCTCATGTCGCTCCTGTTGGGCTCCTCCACCATTAACAACTTTCTGCTCACAACTTGGAAATGCCCCCG



gi|215524536|gb|CU609531.1|CU609531 CU609531 SEFERMI_B_KZ0AAM Theobroma cacao cDNA clone KZ0AAM10YF08FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGCCTTTCTTTATAAACTTCCTTGTCGTCTCTCACTTCAGACACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTANCAAAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCAGAATAATACATGCGGTTGGTGATGCGATGGCCTCGAGAGTAACTTTTATGTG



gi|212313413|gb|CU535332.1|CU535332 CU535332 TEGPULI_KZ0AAI_K Theobroma cacao cDNA clone KZ0AAK9YE21FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
ACACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCAGAATAATACATGCGGTTGGTGATGCGATGGCCTCGAGAGTAACTTTTATGTGAAGTTGAGACTTTGTGAATAAAAAGAAAAAGAATCCTTGTTGTGTACTTTTGTTGTCTGTTTTGTGACTTG



gi|213645561|gb|CU570228.1|CU570228 CU570228 MIRIDUFS_KZ0ACAD Theobroma cacao cDNA clone KZ0ACAD5YF22FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCA



gi|212342052|gb|CU614933.1|CU614933 CU614933 TPFERMI_A_KZ0AAN Theobroma cacao cDNA clone KZ0AAN1YB18RM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
CGGGGACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACCACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGAGAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGTGGCAGAGTAGCTTGCGGTATAATTGGTCTGCAAGGCTGAAGTCTCTTATCCGGGTGGCCAGAATAATACATGCGGTTGGTGATGCGATGGCCTCGAGAGTAACTTTTATGTGAAGTTGAGACTTTGTGAATAAAAAGAAAAAGAATCCTTGTTGTGTACTTTTGTTGTCTGTTTTGTGACTTGAAAGAGCCCTCTCCTCACTGCCGCTTTTAAAGTTTAAAGTGGTTCCTCCGTGTGCTGAATGCTTAATTTGCTGGTCTCCCATGCTTGTTCTT



gi|213638256|gb|CU626495.1|CU626495 CU626495 LEAVES_KZ0ABE Theobroma cacao cDNA clone KZ0ABE9YO01FM1, mRNA sequence

TGTGTTCTCAGGTCACCCCTT
|||| ||||||. ||||||||
ACACTAGAGTCTCGTGGGGAA

EST sequence (targeted fragment marked with yellow):
ACACTCTTTTCTTTCTTTTGTACTGCGAAGGGGTGCTCTGAGATCACATAGAAAAATGGTGAAGGCTGTTGCCGTGCTTAGTAGCAGTGAAGGTGTCAGTGGAACTATTTTCTTCACTCAAGAGGGAGATGGTCCAACTACTGTGACTGGGAACATTTCTGGTCTTGAGCCTGGGCTCCACGGCTTCCATGTCCATGCCCTTGGGGACACAACAAATGGTTGCATGTCAACAGGACCCCATTTTAATCCTGCTGGCAAAGAGCATGGTGCCCCAGAAGATGANAATCGCCATGCTGGTGATCTAGGAAATGTTACTGTTGGTGATGATGGCTGTGTGAGTTTCTCTATTATTGACAAACAGATTCCTCTCACTGGGCCACTCTCAATTATTGGAAGAGCTGTTGTTGTCCATGCAGATCCTGATGACCTTGGCAAGGGGGGCCATGAGCTTAGCAAAACCACTGGAAATGCTGGGTGG