miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGTGTTCTCAGGTCGCCCCTG
species: Elaeis guineensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|161980474|gb|EL689499.1|EL689499 OPSC01274 Elaeis guineensis Suspension cell cultures Elaeis guineensis cDNA clone 196-E4-T3.

TGTGTTCTCAGGTCGCCCCTG
.||| |||||||.|.| ||||
GCACTAGAGTCCGGTGAGGAC

EST sequence (targeted fragment marked with yellow):
TCTCTTCTACCGCTCTTCCAGGAGTGGCCTGAGATCACGTACGAAAATGGCAAAGGCTGTTGCCGTTCTTGGTGGCACTGAGGGTGTCACAGGCACTGTGTACTTCACCCAGGAAGGAGATGGCCCTACTACAGTGACTGCAAACATCTCTGGCCTCAAACCGGGGCTTCATGGCTTCCATGTTCATGCTCTGGGGGACACCACCAATGGTTGCATGTCTACCGGGCCGCATTTTAATCCTCATGGGAAGGAACATGGGGCACCTGAAGATGAGAACCGCCATGCTGGTGATCTTGGGAATGCGACTGCGGGCGAGGATGGTACTGTTACTTTCAGCATTGTTGACAACCAGATTCCCCTCTCTGGACCAAAGTCTATTGTTGGAAGGGCTGTTGTTGTCCATGCTGATCCTGATGACCTTGGGAAGGGTGGTCATGAGCTTAGCAAAAGCACTGGAAATGCTGGTGGAAGGGTTGCATGTGGCGTTATCGGTCTGCAAGGATAAGTTACTTGATCTGCATTTTCAGGGTAAGTTTGTGATGTGAGAGGGCCTATGTACCACAAGTCAACGGCATGTTTCCTTTTCTAAGTTTGTAGGAAAACATCAGCGCGATTGCTAAATAAGAAAGAATGTAGTTTTTGGACC