| mature miRNA: TGTGTTCTCAGGTCGCCCCTG species: Oryza sativa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|313084083|gb|HO213866.1|HO213866 G0194 Goda Heenati Submergence VS control suppression subtractive hybridization reverse libr TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CGCGGGGGTCGCCTGAGATCACATTAACAATGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCAAACCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGCAGAGCCGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCACGAGCTGAGCAAGACCACCGGAAACGCTGGTGGCCGTGTTGCTTGCGGGATCATCGGACTTCAAGGCTGAAACCTGGAGGTGTGAACTCACCTTCCATCTCCCAGCACCAGAAGCCTGAAACTCTACGAGCTCTTAGCCGTTTCGTCTTTACCTGAGTGGCTACTCTAGATTCTACAATAAGCACCTGATCTCTGCGCATGGTTTTTGGTGT | |||||||||
gi|88744967|gb|CI768327.1|CI768327 CI768327 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (9.5min), a TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGGCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTT | |||||||||
gi|88375521|gb|CI681300.1|CI681300 CI681300 Oryza sativa (japonica cultivar-group) 30 days after pollination pistil Oryza sativa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGGGCAACTCGCAGATCGCCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATACACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTG | |||||||||
gi|44676736|gb|CR290170.1|CR290170 CR290170 Oryza sativa library (Han B) Oryza sativa cDNA clone y767c06p5, mRNA sequence TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CCGGGACTTCGGCATTATGGACGGGGATTGGCCAGGCAGGAGAGAGAAAGAGAGAGAGACCATACCAATGCCAAGAACAAGAAATCAGAGAGCCCAAGCAAAAAATCCAATCCGAATCCCCTCCAAAAACCCACCAAACAATCTCCTCCATCTCCAAGAACAAGAACAAGAGAGCATCCTAGAACATTAGGGGATAAAGGAGGAGGAGAAGAAGACCAAGAAAAGTTTCGAGAGGAGAGGGAGGAGAGTTCAAGAACTTGGAGAGAAGGGGATGGATCCGGTGTTGCTGGACGACATCATCCGGAGGCTTATCGAGGTGAAGAATCTGAAGCCGGGGAAGAACGCGCAGCTTTCGGAGTCGGAGATTAAGCAGCTCTGCGCAACCTCCAAGGAGATCTTCCTGAATCAGACCAACCTGCTCGAGCTCGAGGCCCCCATCAAAATCTGCGGTGATGTTCATGGACAGTATTCTGAACTCCTGAGGCTGTTTGATTATGGTGGGTATCCAACTCAGTCCAACTATCTCTTCTTGGGCGATTATGTGGACCGGGGAAAGCAAAGACTTGAGACGATATGCCTTCTTTTGGCTTATAAGATCGAGTACCCTGAAAAATTCTTCATACTCAGAGGCAAGCATGAATGTGCATCGGTACAACGCATCTATGGATTTATGACGAGTGCAGCGACGATCAAGGTAAACTCTGGAGAATTTCCGACGTTTACTGTTACGAGGGATTGTTATACAATCTGTGCCGAGCTCCCCATGAACGGTCAACAGGAAGCAGAAGCAAGGATGAACTGAGAACACAGGGGAAAGGTAAAGAAGTAAAACCTCCG | |||||||||
gi|218499027|gb|FG953781.1|FG953781 MA_PA64s_01592 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GAATTCGCCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCCTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCACTGGAAATGCTGGGGGCCGAGTTGCTTGCGGAATCATCGGACTCCAGGGTTAGACGTCTCAAATTTCCAACATACAGAAGCTGTTCATGTTCGCTCGTATGGATGTAGAAA | |||||||||
gi|44676853|gb|CR290287.1|CR290287 CR290287 Oryza sativa library (Han B) Oryza sativa cDNA clone y844d02p5, mRNA sequence TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ATTGGCATTATGGCGGGGGAACCTCCAGAAGCTCAGATCCTAACCAGCAGGAGTCGCCTCGCCTCCTCCTTCATCCTCCTCGTCGTCGCCGCGGGGGTCGCCTGAGATCACATTAGCAATGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCAAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGAAGAGACGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCCCGAGCTGAGCAAGACACACGGAAAAGCTGGTTGGCGCGTTGATCGCGGGATCATCGGACATTAAAGGTGTAACATGTTAGGTGTAAATCACCATTAATATCCACAAACAGAAACCGGAAAACTACAAGAATTAGAAGAAACGCGATAACAGCAGAGGTCAAATAAATATTCAAAAGAACCGAAGCAGGCCAGGGTCAGGCGGGCAAACACAAGCACCCATAATGGCCCACAACAATAGTATGGAGAAGAAAACCAGACGACCCACAACCCGAACAGCAACGCACACCACACAGAAACCAACAACAGCAAACAAGAGAACACAGCAACAACAACAACACAACACCAGCATACCCAACCCACACAATCAGACAAACACAACCACAACAAGAACA | |||||||||
gi|88372721|gb|CI612649.1|CI612649 CI612649 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGCGTGAGGCGGCGAGCGGCGAGCTCCTCCGGTGATCCGATGCTCGCCGGCCGGGAGAGCTTGCCTGTTTCGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATGGCGGCGGCGGTGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGGGTACGCGACGCCGCTGGATGCCATGGAGAATGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGCGTCTACAACGGTACTTGGAATTAACAAGCCGGATTACCTGGGTACGGTGGACGTGGACCCCAATTCCCCTACATACTCCCAAGTGATCCACAGGCTCCCAGTCACCATGTCGGCGATGAGCTGCATCACTCTGGATGGAACGCTTGCAGTTCTTGCCATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTTGCCTTCGTTGCT | |||||||||
gi|38471774|gb|CF955905.1|CF955905 3150rsiceb_10034.y1 Oryza sativa cv. PA64s leaf cDNA library Oryza sativa Indica Group cDNA 5 TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ACGGCACGAGGATCCGGTCATCAGCAAAGGTTAATTAGGCCCGGAGATATTTGCAGCTGAGAGCGGGGAGGGAACGAATCGGAATCGGCATCGTTATCGGCATCGGCAGCGGCGATGGAGACAGAGAGATGGAACGCGAGGGAGTTCCTACAGGGGCGAGCTGGGAACACACGGTGATAGAGGCGGTCTAGGTACTATTCGTGTGTTCTACAGGTCGCCCCTGCCGGGACTCTCTGGTTGATTATGTATATGTTGATTATATTTCTTTTGCCAAAAGGTCTCCTAAATGGCGCGGTGTAGAAATGATTGAGAGGACCAAAAAGGGAGAGGATTTGCGCGGGCTGGATTTGGACTGAAGGACATCACAACTTGTGACAACTGCCACGACTTCATACAAACTCCATTTTGGGCATGTAAGTACAAATGGATCCATCCTCATGTCCAT | |||||||||
gi|88587313|gb|CI705049.1|CI705049 CI705049 Oryza sativa (japonica cultivar-group) 3 weeks after flowering ear Oryza sativa Japo TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTTG | |||||||||
gi|218478133|gb|FG953380.1|FG953380 MA_PA64s_01191 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CGAATCGAGAGGGTGGCAACTCGCAGATGCCTTCTCGTCGCGNCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCCTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCACTGGAAATGCTGGGGGCCGAGTTGCTTGCGGAATCATCGGACTCCAGGGTTAGACGTCTCAACTTTCCAACATACAGAAGCTGTTCATGTTCGCTCGTATGG | |||||||||
gi|88365488|gb|CI680129.1|CI680129 CI680129 Oryza sativa (japonica cultivar-group) 30 days after pollination pistil Oryza sativa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCAT | |||||||||
gi|117380077|gb|BI892454.2|BI892454 Os5MPREST0007 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-A1A08S 5', mRN TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCCTTCATCCTCCTCGTCGTCGCCGCGGGGGTCGCCTGAGATCACATTAACAATGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCAAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGCAGAGCCGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCACGAGCTGAGCAAGACCACCGGAAACGCT | |||||||||
gi|117225484|gb|CT859144.1|CT859144 CT859144 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GTAGCCCTTCCAGCAGTTGAGACGACGTAAACTGCGGGGAGCCGGCTCAGTAGTACAAGCTGTACTCTTGGCTTCGGGCAAAGCCAGTGTAGTACGTACTTCACGTACTCCGAGTCTTTTCCCAGCGATGGAGCAGCAAAAAGTACGACGCCAATCGATGCCATCCTCCTCCCGACCCCGTGGAAAGGAGTCTATAATACCTGAGAGCGGGGAGGGAACGAATCGGAATCAGCATCGTTATCGGCATCGGCAGCGGCGATGGAGACAGAGAGATGGAACGCGAGGGAGTTCCTACAGGGGCGAGCTGGGAACACACGGTGATGAGGCGGTCTGGTCTTTCGTGTGTTCTCAGGTCGCCCCTGCCGGGACTCTCTGGTTGATTATGTATATGTTGATTATTTTCTCTTGCCAAAAGGTCTCCTAAATGGCGCGGTGTAGAAATGATTGAGAGGACCAAAAAGGGAGAGGATTTGCGCGGGCTGGATTCGGACTGAAGGACATCACAACTTGTGACAACTGCCACGACTTCATACAAACTCCATTTTGGGCATGTAAGTACAAATGGATCCATCCTCATCCTCATGTCCATATCTATTCTAGAGAGTCGGCAATCATCATTTTACTACAAAGACTTTTTTATGTCCACGGTGCTACGTCACCTTATTTGGGTCGAATGTGATGCGTACCAAGTTGAGTCTTAGAGACATGCCTTAAAGTTAGAGGACAACCCCAACTCATTCTCCACCTATATATTTCCCTTAACCGCCATAGATCAACTCGGGGTTTTGTTTAAATCAAAGTTTAGGGTCGCTATTTTGCCCGTGGAATCCTGGTAATCAATTAAAATTGGTGGTTTTTGCCCGTTACCGGTACCCCCCCCCTTTGGACACTCTTGGTTGATTTTTAACCCAACATCCTTTATTCCCAAAAAAAAAAA | |||||||||
gi|66929130|gb|CX115978.1|CX115978 EI101M12 A normalized whole-life-cycle cDNA library of rice Oryza sativa Indica Group cDNA cl TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CGCGTAGGGTCGGCGGAATCCGGGTTCAAACAGCAGGAGTGCTCGCCTCTCTTCATCCTCCTCGTCGTCGCCGCGGGGGTCGCCTGAGATCACATTAACAATGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCAAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGCAGAGCCGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCACGAGCTGAGCAAGACCACCGGAAACGCTGGTGGCCGTGTTGCTTGCGGGATCATCGGACTTCAAGGCTGAAACCTGGAGGTGTGAACTCACCTTCCATCTCCCAGCACCAGAAGCCTGAAACTCTACGAGCTCTTAGACGTTTCGTCTTTACCTGAGTGGCTACTCTAGATTCTACAATAAGGACCTGATCTCTGCGCATGGTTTTTGGGTGGTCCATTCTGTCGCCGCATAGNTGGGGCCCAAGAAACATGTGTTTGTGGTAACCCTAGCTGAAGGTTCCCTTGTGAACCCACAAAATAATATGAAGAATACAAAAAAAGGGGCGGCTAAAACAAAAGTAGTGTGGGAAAGCTCTAGGCGCAAAAAGGCGGCAAAGAGAAACGGGCAAACATCACACTGGTAGAAGAACGCTGGAGAAGGGACATTTCTCATCCGCANNGGAATAAAATAAGA | |||||||||
gi|117230626|gb|CT847420.1|CT847420 CT847420 Oryza sativa (indica cultivar-group) cv. Guang Lu Ai 4 Oryza sativa Indica Group cD TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ACGGCCCCCTGTTCTTCTTCTTCCTCCTCTCCCCTCTCGCCGTGCTGGTGGTGAGTGAGGCGGCGAGCGGCGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGAGAGCTTGCCTGTTTCGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATGGCGGCGGCGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGGGTACGCGACGCCGCTGGAGGCCATGGAGAAGGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGCGTCTACAACGGTACTGGAATTAACAAGCCGGATTACCTGGGTACGGTGGACGTGGACCCCAATTCCCCTACATACTCCCAAGTGATCCACAGGCTCCCAGTCACCCATGTCGGCGATGAGCTGCATCACTCTGGATGGAACGCTTGCAGTTCTTGCCATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCCTTGCATAAGGTGGTCGAGGCTGAGGACATTGCTGAGAAGACAGGGCTTGGATTTCCTCATACATCTCATTGCCTGGCATCTGGGGAGATAATGATTTCTTGCCTTGGGGATAAGGAGGGAAATGCTGCTGGCAATGGCTTCCTCCTGCTGGATTCTGAATTCAATGTCAAAGGACGTTGGGAAAAGCCAGGTCACAGCCCCTTGTTTGGCTATGATTATTGGTATCAACCTCGTCACAAGACAATGATCAGTTCATCATGGGGAGCACCTGCAGCTTTCAGGACTGGTTTTGATCTTCAGCATGTGCAGGATGGTCTCTTATGGGAGGGGGGGGCCCGGTACCCCCCCCTGGGGGGAAAATCCAAAAAAGGCCCGACCCCGTCCCCCCTCTCCCAACCTTTCCCCCCCCCCAATGGGGGAGGGGGGGAACCGCCCCCGCCGCGGCCCATTAACCCCGGCCCGGGGGTGGGGGGGTTTTCGGCACGCCGGGAGAGCTCACAATTTTGGTAGGGCCCCCTATCACCCCCCCCCCTTTTTTTTTTTTTTTTTTTCTCTTTCTTTTTTTTTCCCCTTTTTTGCCGGGGGGTTTTTTCCCCTCTGTCAGGCTCTTAATAATAATGTGGGGGGGGCGGCCGCCCTCGTTGTTTGGTGTTTGT | |||||||||
gi|38476675|gb|CF960808.1|CF960808 10764rsiced_14409.y1 Oryza sativa cv. LYP9 trefoil whole plant cDNA library Oryza sativa Indi TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GCACGAGGGCTCCAGATTCCAAACCAGCAGGAGTCGCCTCGCCTCCTCCTTCATCCTCCTGGGGCGTCGCCGCGGGGGTCGCCTGAGATCACATTAACAATCGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGGGGTCAAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGCAGAGCCGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCACGAGCTGAGCA | |||||||||
gi|218498187|gb|FG955479.1|FG955479 MA_PA64s_03290 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTGCAGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCCTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCACTGGAAATGCTGGGGGCCGAGTTGCTTGCGGAATCATCGGACTCCAGGGTTAGACGTCTCAACTTTCCAACATACAGAAGCTGTTCATGTTCGCTCGTATGGATGTTGAAATAAAAATAAGCACCTGATGTATGACCAGTGTGCAGTTTGCCCCAGTTTATATATATGTGCTATACTCCTGTCCGAACA | |||||||||
gi|58670525|gb|CK059211.1|CK059211 59336rsicek_15541.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GCACGAGGCTCCTCTCCCCTCTCGCCGTGCTGGTGGTGAGTGAGGCGGCGAGCGGCGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGNAGCTTGCCTGTTTCGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATGGCGGCGGCGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGGGTACGCGACGCCGCTGGAGGCCATGGAGAAGGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGCGTCTACAACGGTACTGGAATTAACAAGCCGGATTACCTGGGTACGGTGGACGTGGACCCCAATTCCCCTACATACTCCCAAGTGATCCACAGGCTCCCAGTCACCCATGTCGGCGATGAGCTGCATCACTCTGGATGGAACGCTTGCAGTTCTTGCCATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCCTTGCATAAGGTGGTCGAGGCTG | |||||||||
gi|33676306|gb|CF304545.1|CF304545 ABF1--05-E12.g1 ABF3-overexpressing transgenic rice lambda phage cDNA library (ABF1) Oryza sa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GCACGAGGGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCACTGGAAATGCTGGGGGCCGAGTTGCTTGCGGAATCATCGGACTCCAGGGTTAGACGTCTCAACTTTCCAACATACAGAAGCTGTTCATGTTCGCTCG | |||||||||
gi|88383016|gb|CI683115.1|CI683115 CI683115 Oryza sativa (japonica cultivar-group) 25 days after pollination pistil Oryza sativa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAAAATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCT | |||||||||
gi|29682450|gb|CB678725.1|CB678725 OSJNEf01D20.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf01D20 3', mRNA sequence TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCGCCGCGGGGGTCGCCTGAGATCACATTAACAATGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCAAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGCAGAGCCGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCACGAGCTGAGCAAGACCACCGGAAACGCTGGTGGCCGTGTTGCTTGCGGGATCATCGGACTTCAAGGCTGAAACCTGGAGGTGTGAACTCACCTTCCATCTCCCAGCACCAGAAGCCTGAAACTCTACGAGCTCTTAGCCGTTTCGTCTTTACCTGAGTGGCTACTCTAGATTCTACAATAAGCACCTGATCTCTGCGCATGGTTTTTGGTGTACCATTCTGTCGCCCGCATCGTTGGCGCCCAATGAACTATGTGTTTTGTGTTAAACCTTAAGCTGAAGGGTACCATTGGTAGACTCGATGTTGCTCTCTTCCTCGG | |||||||||
gi|88353696|gb|CI633087.1|CI633087 CI633087 Oryza sativa (japonica cultivar-group) leaf of seedling gamma-irradiated(45Gy), immi TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GAACCTTCCAGAAGCTCCAGATTCCAAACCAGCAGGAGTCGCCTCGCCTCCTCCTTCATCCTCCTCGTCGTCGCCGCGGGGGTCGCCTGAGATCACATTAACAATGGTGAAGGGTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCCAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCCTGTTAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGGGCACCACAAAAAAAAAACCGCCCCACTGCGGTTATTTTTGAATTTTTCCGGGGA | |||||||||
gi|29683114|gb|CB679389.1|CB679389 OSJNEf02N09.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf02N09 5', mRNA sequence TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CTCATCAGAAATCCTATGAGGAGAGGGTGGGCAACTCGCAGATCGCCTTCTCGTCGCGCTCGCGCCGCAGGGGGCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGAGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGATGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCACTGGAAATGCTGGGGGCCGAGTTGCTTGCGGAATCATCGGACTCCAGGGTTAGACGTCTCAACTTTCCAACATACAGAAGCTGTTCATGTTCGCTCGTATGGATGTTGAAATAAAAATAAGCACCTGATGTATGACCAGTGTGCAGTTTGCCCCAGATTATATATATGTGCTATACTCCTGTCCGAACATTACAGTCATTTGACTTGAGTGCATGCGTTTTAAGTATC | |||||||||
gi|218499915|gb|FG968016.1|FG968016 MA_LYP9_06800 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CGGCGCCTAAACTAGTGGATCCCCCGGCTGCAGGATTCGAATTCCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCACTGGAAATGCTGGGGGCCGAGTTGCTTGCGGAATCATCGGACTCCAGGGTTAGACGTCTCAACTTTCCAACATACAGAAGCTGTTCATGTTCGCTCGTATGGATGTTGAAATAAAAATAAGCACCTGATGTATGACCAGTGTGCAGTTTGCCCCAGT | |||||||||
gi|88585569|gb|CI703211.1|CI703211 CI703211 Oryza sativa (japonica cultivar-group) 25 days after pollination pistil Oryza sativa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAAAATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGAT | |||||||||
gi|218478304|gb|FG966125.1|FG966125 MA_LYP9_04909 Mature embryo cDNA Library of LYP9 Oryza sativa Indica Group cDNA 5', mRNA seq TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): ANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATTCGTGGGCAACTCGCAGATCGCCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCACTGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTAGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAG | |||||||||
gi|58668633|gb|CK057319.1|CK057319 57697rsicek_13134.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGAGAGCTTGCCTGTTTCGGGAGGTTTTCAGTGGTGATCTGAGAGCACAGCGAGCCGATTGCGGCGGCGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGTGTACGCGACGCCGCTGGAGGCCATGGAGAAGGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGCGTCTACAACGGT | |||||||||
gi|58600198|gb|CK010726.1|CK010726 31265rsicef_10527.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GCACGAGGCTCTTCTTCCTCCTCTCCCCTCTCGCCGTGCTGGTGGTGAGTGAGGCGGCGAGCGGCGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGAGAGCTTGCCTGTTTCGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATNGCGGCGGCGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGGGTACGCGACGCCGCTTGAGGCCATGGAGAAGGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGCGTCTACAACGGTACTGGAATTAACAAGCCGGATTACCTGGGTACGGTGGACGTGGACCCCAATTCCCCTACATACTCCCAAGTGATCCACAGGCTCCCAGTCACCCATGTCGGCGATGAGCTGCATCACTCTGGATGGAACGCTTGCAGTTCTTGCCATGGTGATCCATCGGCTAACCGCCGTTTCTTGATTCTGCCTTCGTTGCTGTCTGGCCGTGTGTATGTCGTTGACACGCT | |||||||||
gi|88589079|gb|CI706931.1|CI706931 CI706931 Oryza sativa (japonica cultivar-group) 30 days after pollination pistil Oryza sativa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGA | |||||||||
gi|88761114|gb|CI770670.1|CI770670 CI770670 Oryza sativa (japonica cultivar-group) root of seedling gamma-irradiated (9.5min), a TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGGCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCAC | |||||||||
gi|218505465|gb|FG954714.1|FG954714 MA_PA64s_02525 Mature embryo cDNA Library of PA64s Oryza sativa Indica Group cDNA 5', mRNA s TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CCACGCGGTGGCGGCGCTCTAAACTATGGATCCCCCGGGCGCAGAATTCGAATTTCCAAACCAGCAGAGTCGCCTCCCTCCTCCTTCATCCTCCTCGTCGTCGCCGCGGGGGTCGCCTGAGATCACATTAACAATGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCAAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGCAGAGCCGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCACGAGCTGAGCAAGACCACCGGAAAC | |||||||||
gi|88365348|gb|CI679982.1|CI679982 CI679982 Oryza sativa (japonica cultivar-group) 35 days after pollination pistil Oryza sativa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTG | |||||||||
gi|88578412|gb|CI687342.1|CI687342 CI687342 Oryza sativa (japonica cultivar-group) 30 days after pollination pistil Oryza sativa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCANTGGAAAT | |||||||||
gi|29682452|gb|CB678727.1|CB678727 OSJNEf01D21.r OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf01D21 3', mRNA sequence TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GCCAGATTCCAAACCAGCAGGAGTCGCCTCGCCTCCTCCTTCATCCTCCTCGTTGTCGCCGCGGGGGTCGCCTGAGATCACATTAACAATGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCAAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGCAGAGCCGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCACGAGCTGAGCAAGACCACCGGAAACGCTGGTGGCCGTGTTGCTTGCGGGATCATCGGACTTCAAGGCTGAAACCTGGAGGTGTGAACTCACCTTCCATCTCCCAGCACCAGAAGCCTGAAACTCTACGAGCTCTTAGCCGTTTCGTCTTTACCTGAGTGGCTACTCTAGATTCTACAATAAGCACCTGATCTCTGCGCATGGTTTTTGGTGTACCATTCTGTCGCCCGCATCGTTGGCGCCCAATGAACTATGTGTTTTGTGTTAAACCTTAAGCTGAAGGGTACCATTTGTAGACTCGATGTTGCTCTCTTCCTCGG | |||||||||
gi|163920352|gb|EG709555.1|EG709555 Os5MPREST0132 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-A2E02S, mRNA s TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCCTCGTCGTCGCCGCGGGGGTCGCCTGAGATCACATTAACAATGGTGAAGGCTGTTGTTGCGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTC | |||||||||
gi|88693207|gb|CI736782.1|CI736782 CI736782 Oryza sativa (japonica cultivar-group) 1 day after pollination pistil Oryza sativa J TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TGTTCTTCTTCTTCCTCCTCTCCCCTCTCGCCGTGCTGGTGGTGAGTGAGGCGGCGAGCGGCGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGAGAGCTTGCCTGTTTCGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATGGCGGCGGNGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGGGTACGCGACGCCGCTGGAGGCCATGGAGAAGGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGNGTCTACAACGGTACTGGAATTAACAAGCCGGATTACCTGCGTCCGGGGGACCT | |||||||||
gi|55439537|gb|CV733078.1|CV733078 FLO--07-N09.g1 Rice flower lambda phage cDNA library (FLO) Oryza sativa Japonica Group cDNA c TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): AAACTCGCAGATCGCCTTCTCGTCGCGCTCGCGCCGCAGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCACTGGAAATGCTGGGGGCCG | |||||||||
gi|58672812|gb|CK061498.1|CK061498 58448rsicek_14137.y1 Oryza sativa cv. PA64s panicle ferile cDNA library Oryza sativa Indica G TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GCACGAGGCTTCCTCCTCTCCCCTCTCGCCGTGCTGGTGGTGAGTGAGGCGGCGAGCGGCGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGAGAGCTTGCCTGTTTCGGGAGGTTTTCAGGGNTGATCTGAGAGCACAGCGAGCCGATGGCGGCGGCGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGGGTACGCGACGCCGCTGGAGGCCATGGAGAAGGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGCGTCTACAACGGTACTGGAATTAACAAGCCGGATTACCTGGGTACGGTGGACGTGGACCCCAATTCCCCTACATACTCCCAAGTGATCCACAGGCTCCCAGTCACCCATGTCGGCGATGAGCTGCATCACTCTGGATGGAACGCTTGCAGTTCTTGCCATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCCTTGCATAAGGTGGTCGAGGCTGAGGACATTGCTGAGAAGACAGGGCTTGGATTTCCTCATACATCTCATTGCCTGGCATCTGGGGAGATAATGA | |||||||||
gi|88413051|gb|CI578902.1|CI578902 CI578902 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TGGAGGCGGCGAGCGGGGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGAGAGCTTGCCTGTTTCGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATGGGGGCGGCGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGGGTACGCGACGCCGCTGGAGGCCATGGAGAAGGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGCGTCTACAACGGTACTGGAATTAACAAGCCGGATTACCTGGGTACGGTGGACGTGGACCCCAATTCCCCTACATACTCCCAAGTGATCCACAGGCTCCCAGTCACCCATGTCGGCGATGAGCTGCATCACTCTGGATGGAACGCTTGCAGTTCTTGCCAT | |||||||||
gi|163922696|gb|EG712192.1|EG712192 Os5MPREST3635 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-L4E04SA, mRNA TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GCCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCG | |||||||||
gi|88460064|gb|CI695261.1|CI695261 CI695261 Oryza sativa (japonica cultivar-group) library (Kikuchi S) Oryza sativa Japonica Gro TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGAATGGTCCGACCTCTNGTGAACGGGAAGTGTCTCTNGGGCTCAAGCCANGGGCTCCATNGGATTCCATGGTGCACGCGCCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAAAATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCT | |||||||||
gi|163928934|gb|EG709762.1|EG709762 Os5MPREST1444 Rice young panicles Oryza sativa Japonica Group cDNA clone 5MPR-F1B09SA, mRNA TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CGGCCGGGGGGGCAACTCGCAGGTCGCCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATCCTGATGATCTTGGCAAGGGTGGACATGAGCTTAGCAAGACCACTGGAAATGCTGGGGGCCGAGTTGCTTGCGGAATCATCGGACTCCAGGGTTAGACGTCTCAACTTTCCAACATACAGAAGCTGTTCATGTTCGCTCGTATGGATGTTGAAATAAAAATAAGCACCTGATGT | |||||||||
gi|44679681|gb|CR293115.1|CR293115 CR293115 Oryza sativa library (Han B) Oryza sativa cDNA clone y616a10p5, mRNA sequence TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TGGAATCGGCATATGGCGGGGAAGAAAGACACGTGTCCACGTGGACTGGATCTGAAATTTCCTCCTCCCTTCTGGAGTCTTCCTCATCAGAAATCAGAAGAGGAGAGGGTGGGCAACTCGCAGATCGCCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACNATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAATGAGGGTGTCAAGGGCACCATCCTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTAGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTCATCTTGGAAATATAACAGCTGGAGCAGATAGTGTTGCTAATGTCAATGTCTCTGACTAGCAGATCCCCCTTACTGGAGCACACTCCATCATTGGACGAGCTGCTGTCATCCAGTGCTGATCCTTATTATCTCGGCAAAGGTGGCACATAGCGTACAACGAGCACTAGACAAATCTAAGGGCCACAATGATTGAGCACTAACGAGCGCCCCGGGTGAACGCCCCACAGCCCACACTCAGACGGAGGCACTGCGGCCGAAGGGGCGCAAGACACAAACCGCGCAGCCGACCGGGTAGAAACCCCGGACAAAAGGAAAACGCGGCAAGCAGGGTAAACGAGAAGCGAATCCACCCAAGGAACAAAAACAGAAGACAGGAAACA | |||||||||
gi|29682449|gb|CB678724.1|CB678724 OSJNEf01D20.f OSJNEf Oryza sativa Japonica Group cDNA clone OSJNEf01D20 5', mRNA sequence TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): CCTCGCCTCATCCTTCATCCTCCTCGTCGTCGCCGCGGGGGTCGCCTGAGATCACATTAACCCTGGTGAAGGCTGTTGTTGTGCTTGGTAGCAGTGAGATTGTTAAGGGCACTATCCACTTTGTCCAAGAGGGAGATGGTCCCACCACTGTGACTGGAAGTGTCTCTGGCCTCAAGCCTGGTCTCCATGGGTTCCATATTCATGCACTTGGTGACACCACCAATGGTTGCATGTCAACTGGGCCACACTACAATCCTGCCGGAAAGGAGCATGGAGCACCAGAAGATGAGACCCGCCATGCTGGTGATCTTGGAAATGTCACCGCTGGAGAAGATGGTGTTGCTAATATCCATGTTGTTGACAGTCAGATTCCACTTACTGGACCAAATTCAATCATTGGCAGAGCCGTCGTTGTGCATGCCGATCCTGATGATCTTGGAAAGGGTGGGCACGAGCTGAGCAAGACCACCGGAAACGCTGGTGGCCGTGTTGCTTGCGGGATCATCGGACTTCAAGGCTGAAACCTGGAGGTGTGAACTCACCTTCCATCTCCCAGCACCAGAAGCCTGAAACTCTACGAGCTCTTAGCCGTTTCGTCTTTACCTGAGTGGCTACTCTAGATTCTACAATAAGCACCTGATCTCTGCGCATGGTTTTTGGTGTACCATTCTGTCGCCCGCATCGTTGGCGCCCAATGAACTATGTGTTTTGTGTTAAACCTTAAGCTGAAGGGTACCATTTGTAGACTCGATGTTGCTCTC | |||||||||
gi|58694204|gb|CK082891.1|CK082891 85719rsicen_3128.y1 Oryza sativa cv. LYP9 booting whole plant cDNA library Oryza sativa Indic TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TCCCCTCTCGCCGTGCTGGTGGTGAGTGAGGCTGGCGAGCGGCGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGAGAGCTTGCCTGTTTCTGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATGGCGGCGGCGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGCCAGGGTACGCGACGCCGCTGGAGGCCATGGAGAAGGGCCCGAGGGAGAAGCTCCTCTACGTCACCTGCGTCTACAACGGTACTGGAATTAACAAGCCGGATTACCTGGGTACGGTGGACGTGGACCCCAATTCCCCTACATACTCCCAAGTGATCCACAGGCTCCCAGTCACCCATGTCGGCGATGAGCTGCATCACTCTGGATGGAACGCTTGCAGTTCTTGCCATGGTGATCCATCGGCTAGCCGCCGTTTCTTGATTCTGCCTTCGTTGCTGTCTGGCCGTGTGTATGTCGTTGACACGCTGAAGGACCCAAGGGCGCCTGCCTTGCATAAGGTGGTCGAGGCTGAGGACATTGCTGAGAAGACAGGGCTTGGATTTCCTCATACATCTCATTGCCTGGCATCTGGGGAGATAATGATTTCTTGCCTTGGGGA | |||||||||
gi|88313437|gb|CI671553.1|CI671553 CI671553 Oryza sativa (japonica cultivar-group) 30 days after pollination pistil Oryza sativa TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): TTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTCCATCATTGGCCGAGCTGTTGTTGTCCATGCTGATC | |||||||||
gi|58600004|gb|CK010532.1|CK010532 33808rsicef_8179.y1 Oryza sativa cv. PA64s panicle sterile cDNA library Oryza sativa Indica G TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GCACGAGGCTTCTTCTTCCTCCTCTCCCCTCTCGCCGTGCTGGTGGTGAGTGAGGCGGCGAGCGGCGAGCTCCTCCGGTGATCCGAGGCTCGCCGGCCGGCGAGAGCTTGCCTGTTTCGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATGGCGGC | |||||||||
gi|88337142|gb|CI628228.1|CI628228 CI628228 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GAGAAATCAGAAGAGGAGAGGGTGGGCAACTCGCAGATCGCCTTCTCGTCGCGCTTGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGCCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCA | |||||||||
gi|88357573|gb|CI623627.1|CI623627 CI623627 Oryza sativa (japonica cultivar-group) callus Oryza sativa Japonica Group cDNA clone TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GTCAGATCGCCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCGACCTCTGTGACGGGAAGTGTCTCTGGGCTCAAGCCAGGGCTCCATGGATTCCATGTGCACGCGCTCGGTGACACCACTAATGGCTGCATGTCAACTGGACCACACTTCAATCCTACTGGGAAGGAACATGGGGCACCACAAGATGAGAACCGGCATGCCGGTGATCTTGGAAATATAACAGCTGGAGCAGATGGTGTTGCTAATGTCAATGTCTCTGACAGCCAGATCCCCCTTACTGGAGCACACTC | |||||||||
gi|88409753|gb|CI569043.1|CI569043 CI569043 Oryza sativa (japonica cultivar-group) shoot Oryza sativa Japonica Group cDNA clone TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GATTATTCTTCTTCCTCCTCTCCCCTCTCGCCGTGCTGGTGGTGAGTGAGGCGGAGAGCGGCGAGCTCATCCGGTGATCCGAGGCTCGCCGGCCGGCGAGCAGCTTGCATGTTTCGGGAGGTTTTCAGGGTGATCTGAGAGCACAGCGAGCCGATGGCGGCGGCGGCGAACGGGGCGGCGTGCTGCGGTGGCGCGACGGGGTACAGGGTATGCGACGC | |||||||||
gi|88355835|gb|CI626276.1|CI626276 CI626276 Oryza sativa (japonica cultivar-group) seed Oryza sativa Japonica Group cDNA clone J TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGATTTTCCTCCTCCCTTCTGGAGTCTTCCTCATCAGAAATCAGAAGAGGAGAGGGTGGGCAACTCGCAGATCGCCTTCTCGTCGCGCTCGCGCCGCAGGGGTCGCCTGAGAACACATAGACAATGGTGAAGGCTGTTGCGTGTGCTTGCTAGCAGTGAGGGTGTCAAGGGCACCATCTTTTTCTCCCAAGAGGGAGATGGTCCACCTCTGTGACGCGAAGTGTCTCTGGGCTCAAA | |||||||||