| mature miRNA: TGTGTTCTCAGGTCGCCCCTG species: Populus nigra database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|161922308|gb|DB910750.1|DB910750 DB910750 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): GGGTTGGGGGGCTCATCCAAAAAGGAAGCCNNNTAGTTGCTGAGGGTGAAGATGGAAAAACCTGGCAGTATGATGTTCCAGAAATCCAGGGACATCGATTGAGAGGAGGGCCTCAAATGATTCAACTGAGTCTAGACGGGAAGCGGCTTTATGTCACCAACTCACTTTTCAGTACTTGGGATCGTCAGTTTTATCCAGAAGTCGTGGAGAAAGGATCTCATATGTTACAGATAGATGTTGACACTGAGAAAGGTGGTCTTGAAATAAATCCAAACTATTTTGTAGACTTTGCATCTGAACCTGATGGACCTTCCCTAGCGCATGAGATGAGATACCCAGGAGGTGACTGCACATCAGATATATGGATCTAAGCATCCTGAATGGTTTGGCAGTGAGGGGTTACCTGAGAACAGACCTTAGGAGGTAATAATATCAATGTGTAAATTGCAATGGCATGTTGTGGCACTTACTCTTTGATGGATGTGTAACTTCGTTCCTTTTAATGCTTTAATCCATCGTTTAATATC | |||||||||
gi|161935862|gb|DB900552.1|DB900552 DB900552 full-length enriched poplar cDNA library, mixture of leaf, bud, stem, root Populus TGTGTTCTCAGGTCGCCCCTG EST sequence (targeted fragment marked with yellow): AATGCTTAAAAGGAGAGTACCTCCTGCAGTTCCTGGCATCATGTTGCTGTCGGGAGGACAACCGGAAGTGCAAGCAACGCTCAATCTCAATGCAATGAACCAAAGCCCCAACCCGTGGCATGTTTCCTTCTCATATGCACGTGCACTGCAGAACACCGTGCTCAAGACATGGCAGGGACGCCCTGAGAACGTGGAAGCTGCTCAGAAATCACTTTTGGTGCGTGCCAAGGCTAACTCGCTGGCCCAGCTTGGTAGATATTCCGCTGAGGGTGAAAGCGAGGAAGCTAAGAAGGGAATGTTCGTAAAGGGCTACACCTACTGAGCAGCATTAACCAAACTAGCTTGTGGGTTCCAATTAGTGTGTAATCTGCGATTTTCATCGTTCCTTTTTGTGTGCTAGCTATGCAAGCTGAGAAATTGCAACATTAGAGGATCAGCTTCTTTGTTTCTTTCTCCTTTGTGGTTAACACACCGTGTGAAAGGAGAACTTTTACAAACTTTGATCAAGGAGGTGGGTTCGGTGAGAGGAAGAATATCCATGGACCCTAGAGACTCTTCTTGTTCGTTTCCATAAATGCAGCCCATCTCGTTTCCTCCC | |||||||||