| mature miRNA: TGTGTTGTAAAGTGAATATCA species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|193592291|gb|FK546559.1|FK546559 454GmaGlobSeed281191 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): TTGTGTTCTTTAATTTACAACACAAGATTGGTGGCTTTGGCATGTGTTTAAGGGATGAAAGGGAGTTTTGGTTGGGGGGATGAAGCGTTTGTTGGATGAGATGAAATTGGGAATTTCTAGCACGAG | |||||||||
gi|58025167|gb|CX711908.1|CX711908 gmrtDrNS01_39-D_M13R_E02_008.s4 Water stressed 48h segment 2 gmrtDrNS01 Glycine max cDNA 3', TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): GTTGCTATGTGGGGAGTTTAAGTTTGGGGTCAAGCATGGACTTGGATGTTACCATTTCAGAAACGGAGATAGGTATGCTGGAGAGTACTTTGGAGATAAAATACATGGCTTTGGTGTCTACCACTTTGCCAATGGCCACTATTACGAAGGTTCATGGCACGAAGGTCGTAGGCAAGGTTATGGCATGTATATGTTTCGAAATGGTGATGGAAGATGTGGTGAATGGGATGCTGGCAACCTCAAACTCTCTCTACCACCACAAAATGATGCTATCATTCGCACAGTTCAGGTATTTGTCACAGACATTCACTTGTTTTGGCCTTACCTAAGGAGTAAACCCCACTGTGCTCTAAAGTCTTTGACTTTGTAAAATGTCAAGTACTACAGTGAAAAAGTTTTGTGGAGTTTGGAATTAGTGATTGATGCTTACAATCTCAGGGCTAAAAAGGGGTGGTTTACTCCTTGATTCATTGCTGTATTCTTCAAACCTATTAGAAATGATGATGCTGTTCTCATAAATGTTTGTTACCCTTTATGGGGTTGAAATTGCAGGCTGCTAGGAAAACAGCTGAAAATGCTATAAATCTTCCCCGGAAGGATGACCACGTGAACAAGGCAGTAATTGCTGCAAACAGGGCTGCCACTGCTGCTAGAGTTGCTGCAGTGAAAGCTGTTCAGAACCAAATGGGTGGAAAATTTTGCGATATTGATGTCTGAGTTTAGGTGTTAGCTAGCTTTTGTTTGAAAATTGTAAATTTTTACTAGTAGTACCAGTTTTAAGTACTTGGAAGATGCTACCCCGGTGAGGAAAAGCTCATTGGAGGTTGAAGAGTATGTTCTGATGTTTGTTTCACAACACAACATGTACATAAACCCATGTATATCAATGAAAAGATGCATTTTCAAAAGTACC | |||||||||
gi|214004291|gb|DB984765.1|DB984765 DB984765 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): GAGGTTAATTTATTCAACATTGCTTCACAAACCCCAATATTGAGAGTATTACACAATCTGTAAGCATCATGTATTAAGATGAAGCAGCATTCTTTTACAAGAAGAATGATCATTTTAAGGGTTATGTTGAGTAGCAGAATACAAAGCCTAAAAGTCCACTATACTACATATATTGAGTAAATGAATTCATTTTCCAACACACCAACATATGGAGATGCTTAAATAGAAACTGAAGCAGTCCTGTGAAAAACAGTGACAGCTCCATGCCTAGTGTAGAAAATGGGAATGAGGTGCCCATTGTACTTGCTTCCCTGAGTATACCATTGATGTTTTCTGGGTGCTACTGA | |||||||||
gi|193720461|gb|FK659385.1|FK659385 454GmaGlobSeed394017 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): CGGCCGGGCTTGGTGTGCATCAAAAGGAAATATTCCATATTTTGAGACATCTGCCAAAGAAGGTATTAATGTTGAAGAAGCATTCCAATGCATAGCAAAGAATGCCCTGAAAAGTGGAGAAGAAGAAGAATTATACCTGCCAGACACAATTGATGTTAGGAAACAGCAGTCAGCCGACGGGACAAACAGGATGTGAGTGCTGAATATATTAGGTTTTTACTTTACAATACAAATAAAGTAC | |||||||||
gi|193631379|gb|FK578618.1|FK578618 454GmaGlobSeed313250 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): TAATGCGGCTATCAGTAGAAGCATTAGATTCAAGAGCTGATATTGTTATTAGCTTTACAATATATTTCCAAATTATCCAAGTTTGAATCATTTACGTAGATGGAAGTATCTTGTTTACTTATTACAACGGTGAAAGTATAGCCTGTAGGGTATTGGTTGGGATATAAGCATATATGGCATATCAAGTCATTTAC | |||||||||
gi|193570957|gb|FK531292.1|FK531292 454GmaGlobSeed265924 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): CATTTAAGTATCTAAGCACTTGCTCATTGAACTCAAAGCTCACTGAATTCCAAGCTGAAATTGAAACTAAGCACTTGCATGACATGTCGTCTGCAATTCTCTTTACAACACGCTCATTCATGGAAGCTTAAAATTTCAGCTTCAGGGCTTGTGAAGTTTGAAGCCAAAAACTCTCGGGACATAGCTCTGTGATGGTTTCTGTGGCTTTAGTTGTCCATAAG | |||||||||
gi|193645455|gb|FK590423.1|FK590423 454GmaGlobSeed325055 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): TAATGCGGCTATCAGTAGAAGCATTAGATTCAAGAGCTGATATTGTTATTAGCTTTACAATATATTTCCAAAATTATCCAAGTTTGAATCATTTACGTAGATGGAAGTATCTTGTTTACTTATTACAACGGTGAAAGTATAGCCTGTAGGGTATTGGTTGGGATATAAGCATATATGGCATATCAAGTCATTTAC | |||||||||
gi|214009737|gb|DB986892.1|DB986892 DB986892 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): AAAAAAATAAACCTCCGAATGAATTCCAAACTCAGTATTATTTCTAGTAAATAAAAGCCCTCAGCTTGGGATTGAATCTTAAACTGTATTAACAATTTCTTCACAGGTACAGTACAATACATTTTGAAAGCTGTGTACCCTTTTATTCTAAACAAACTTGATACTTAAAAAGGCTTTTTTTTTATCACAACAGGTTATGTATCCAAGTATTGTTACTAAAACACAAGTATAACTAAATTTGATTCTTTAGTGTTGCTGCCCAGCAGTGGAAATTATGAAACAGTTGTTGCTGTTATATAATTTACAACACAGAAAAGAAAATCCATATCAGAGTAATCACCAAATGCGGTTAAGTTTAGACTTCTGACGGAATTGCTTTTTCGTTGTACACCACGGGCCAGGAAAGGTGCTCAAACTGCTAATAATCTTTCAACTGAACCATGCAGTATCCACACCAAATGGAGGAGATATGACTCTGATTCCATTGGACATATAAGAATGAAGTAATGAATGGAGTTCCTTTTCTAACCTTTCTGCTAAACCAGGT | |||||||||
gi|192294944|gb|FG986663.1|FG986663 GLLBX33TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): CTAAACATTTACCGTGTTCTCACGTCATGGCTGCCTGTAAATCTGTCAATGTTGATCCCATGACCTATGTGCCGATGATATTCACTTTACAACACATTTTGCACATCTACGACAACTCCTTTGGTTTATTGCCACACGAATCAATGTGGCAAGAATATGAAGGAGATCAGTAGGGTCCTGATCCAAAGAGAAAGAGATTGTAAAGGGTCGTCCAGTTTCAACTCGCATTCCTACTGAGATGGAC | |||||||||
gi|207717248|gb|GD697225.1|GD697225 454GmaGlobSeed439874 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): AATGCATTCATTTCATCATTTAATATTTACTTTATAACATATTAAGAAGATCTGTAAGAAAATATAATAAGAGGATGCCAATTGCCACATTACTCATTTTCATAGTAAACATACTACATACTGCAACTAAAAAGTAAAACATAAGAAGAAGAGAGAACACAATTGCCATTAATTAAACAAGCGCAGAAGAGCTTAGAGGGATAGGTGCTTTCTTAATTCTCTCAACGGCTGTTTTTAAAGTAGTAAGGGATTCTGCAAAAGAGA | |||||||||
gi|214005814|gb|DB990156.1|DB990156 DB990156 full-length enriched soybean cDNA library, mixture of seedling, young plant, adult TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): AATAAAATCAGTCCATACATAGATAATCAGGTACCTTATCGCGCTATATCCAACTTTTGAAATTTACTTTACTACACCAAATTTGACATACCAAATTACAGTACAATGTCAAATTTGGGGTAGTAAAATGCATAATTAGTTACTTTTGCACATTATAGGTCCTTCAAATACAGGACTGTAAAATACATTAACATACATATAATATTTGATACAAAATGCATATGGAGACTGCCAAGCTTTATTCATTGATAATTAATTACATCACAAAGTGCATCTAGAAAGATACTTGAATACCAAGTAGTGCTATCAACTGAGCAATGAACTCAGGGTGCCCTGGCCATGCAGCTCCAGTAACTAGATTTCCATCAGTGAAGCATCGGCTTATAGGGTCAGGCTCAAGCCATGTTGCTCCTGACAGAACCACATTAAGCTTCACAGCCGGATAAGCAGTACATTTCCTTCCCTTGAGAACACCAGCAGCAG | |||||||||
gi|207696217|gb|GD677320.1|GD677320 454GmaGlobSeed419969 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TGTGTTGTAAAGTGAATATCA EST sequence (targeted fragment marked with yellow): TCAGAAGGGTCACCCTACTACATGATGTGCCTTCGGCTTATTAGCTGGTGAAGTAGAAAGTTGAGTTAGTACTTGGAGAGGTTGCTCTCAACTCGACTGCTGAAACATACTGTATTAATTTGAGTGAGCTAGCAGCTGCTTAACTACTTCTCTCATCCCAAACCACCTTATTAAGAGCAACTTGCTGATCCATAGTTGGCTTATTAGTAACATTCGCAGAAGGTGATTTGCACTTTGCAACACA | |||||||||