miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TGTTCTTGACGACTGGACCGC
species: Picea engelmannii x Picea glauca
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|69381662|gb|DR473257.1|DR473257 WS00958.B21_H20 IS-B-N-A-10 Picea engelmannii x Picea glauca cDNA clone WS00958_H20 3, mRNA s

TGTTCTTGACGACTGGACCGC
||||||||||| |||||||.|
ACAAGAACTGCAGACCTGGTG

EST sequence (targeted fragment marked with yellow):
TTTTTTTTTTTTTTTTTTGAAACATTTTAAAGATTAAAAATATATAATCTCACCATTAAGGCATCCACCACGAAGTCGTTTGTTTTGAAACCCTAGAAAAGGGCTTTCTCCAGATTTCAATCCCGGTGGGCTCATAGTGCGGCTTCCACCACGAAGTCGATTATTTTGCAACCCTAGAAAGGGATTTTCTCCAGATTTCAATCCCGGTGGGCTCATAGTGCGGCTTCTCTTACAGACTTCGAAGATCATGCTAAGAAACAAATAAAGGGATAAGAGGAGGCATATCTGGTTAAGAAAATACCCAGATGGACGGAAGCTCCAATCTGAGGAGTCAAGTTTCGCCTCCTGTAATTTCTTTCAGCTGAAGTATGTCAGAAAGGCATGTAAATGAAAGCAAAGGTGTTCTTGACGACTGGACCGCGATAGTTGATGGGTTATTACTGCAAATCTTAAAGCAAACCACGTGGTCCAGACGTCAAGAACACCTTCGCTTCCTCTTCCTCTTTCTCCTCCAGCAGCACTTACAGAGACAGATCAAGAAACAAATGAATAGAGCATTTCTTGCATCGGC