| mature miRNA: TGTTGTCTCAAGCTTGCTGCC species: Saccharum officinarum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|36033052|gb|CA286738.1|CA286738 SCBGSD2053A11.g SD2 Saccharum hybrid cultivar (mixed) cDNA clone SCBGSD2053A11 5', mRNA seque TGTTGTCTCAAGCTTGCTGCC EST sequence (targeted fragment marked with yellow): CACGAGAAAAGTGAGGGGAGAGAAAAAATAGGCCGTAAGCTTACGACCTGCTTATACACCGGAACCAAAAAGTTGTACGCCGTAAACCGGCTAACTATTATACGAGTAGGCTGATAGATTAGCTGCCAGCAGCCGGCTGTATTAGCCTTGCTCTAAGCACGGCCTCGGCGTATGCACGAGCCGAGCATGGTTGTCCTGTTGACACTTGAGAGCGATGCATCATCGTCATCGACTCCACCGCTCGGCTCGGCTGCCCATGAAAAAGAACCGGTGCAAGATTTATTAGAGTACTGTACTCTTGGTGAATAAAAGACAAATTTCCCCAACTGTCCGAGGTGTCGAGCTTGAGACAGCGCCATGCTTGACGAGGCTCGGGCGGAGATGCGCTCCCCTCGACGTGACGCGGGCCTGTGCCTAGTGGCTTGCTGCCGAGGGTGGGAAGCAGCCGGCGGGGTTCCAACCCCCGCACCGCACCTGGTCTCCGAGAGGCTACGGCAAGGTAGCGTCTTTCTT | |||||||||