| mature miRNA: TTAATCAAGGAAATCACGGTCG species: Glycine max database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|313907053|gb|HS410921.1|HS410921 EST214 Root Supression Substractive Hybridization cDNA Library of Yunnan Small Black Soybean TTAATCAAGGAAATCACGGTCG EST sequence (targeted fragment marked with yellow): TAATGGGATTGGAGATGCCATCAAGAGTCATTATATTGATCCATGGCCATCATAGACACGAGACTTGTTATTTGGAGATTTGACCGAGCATTTCCAATTGACTAATTTCAAGGAATTAACAGTTCCACTTTATTACAGGGAATTTGAGAATTCCTCCTCTCTTTCGTCTCTCTCATAGCTTCACAAACGCTTCTATCATCATCCTCGCTCACCCATGCTTCTCTCATCATTCTGCAAATCGCAAAGGGATTCATCTTTGCTTCACTTCTCCCTCTCTCATCGCTCTCGCTCTTTGCTTCAATTCTCCACGAAGAAGAGAGGTGATCTGAAGTTTCAACAACTTATCAAGCAGTAAACCTTCTTTGTGGTCATCCATGCTAAGTACAAGAGATTGATTATTTTTGGTCATGCCACCTTCGAGTCTCTTTGCATGTGTAGATGCTTCATAGCTAAGATAGTTGAAATTTTGATCTCAACGCACACATATTAAGAACAGAAACATGGTACTGAATATGCTCATTACTAATATACATAAGTGAGACAACAGAACTTGGTTCATACAATATCATTCCAGGCTTGATTAAATGGAGGTCATTCAACAGCTTCTCTATTATGATTTGCTCTATTGTTTGTAATCTCCAACTTGAGTGTAATTTCTTTGATTAATTAAAAAGTTGATAGATGGAAGTTGTGAAGGGAACCAGCAACGAATTCATTGAGTACCTGCCCGGGCGGCCGCTCGAAAT | |||||||||
gi|193422727|gb|FK385944.1|FK385944 454GmaGlobSeed120576 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA TTAATCAAGGAAATCACGGTCG EST sequence (targeted fragment marked with yellow): CGGCCGGGAGTTCCTTGGTTAGGGTTTCTTAAGTCCTTAACTTTAGTCTTGTACCTTGGCTGTCTTCGGGGTTTTAAAGCCGATCCGCTATTTGAGGTCTGGCAAGGATATGGTGGAGCATACACGTATTGGCGAGTGGTATGCAAGAATGGAGAGTGCTGTGGGAGAGCCTTCCAGGATTAAAGCCTAAATTGGGTTCTTTCTTGTCCTGACAATTGACATTTATTTTTTGGCTTCTACTATTATTATGGTCTTGCTTTTGCCTCCACTGGTTTGATGG | |||||||||
gi|298193630|gb|HO040278.1|HO040278 ocpsga0_0414_A03.ab1 Soybean immature seed full-length-enriched cDNA library Glycine max cDN TTAATCAAGGAAATCACGGTCG EST sequence (targeted fragment marked with yellow): GGGGGAGAGCGATGGTGAAAATCTCACTTGGTGGATACGATGATGGGGAAGGACCCAGCAACCGAACCCATAAGCGACGCAGGGAAGATGATGATGACGACGACGAAGAAGAGCAACAACAACAACGAAGCTTTGAGATGGTGGACCCTTCAATAGGAACTCAAGAGAACGAAGATCATGCTGCTCCATCCAATGATGGATCGAATTCTAACGGAAATGGGGCTGGAACCAGTACCCGGGATAGGTCCGTTCCTATCTTCGTTTCCGACCCTGATGTCCTTGATTGCTGCATTTGCTATGAACCCTTGACTTCCCCTGTGTTCCAGTGTGAGAATGGACATATTGCTTGCTCTATTTGCTGTGTGAGACTCAGTAACAGGTGTCCCATGTGTTCAATGCCCATTGGGTATAACCGTTGCCGGGCTATTGAGAAGGTCTTGGAGTGTATTAAAATGTCATGCCCGAATGCAAATTATGGCTGCAAAGAGACACTTAGTTACAGCAAGAAAAACGAACATGAGAAGGAATGCATCTATCTGCCATGTTCATGCCC | |||||||||
gi|193372736|gb|FK337492.1|FK337492 454GmaGlobSeed72124 Soybean Seeds Containing Globular-Stage Embryos Glycine max cDNA, mRNA s TTAATCAAGGAAATCACGGTCG EST sequence (targeted fragment marked with yellow): TCTTCGTTTCCGACCCTGATGTCCTTGATTGCTGCATTTGCTATGAACCCTTGACTTCCCCTGTGTTCCAGTGTGAGAATGGACATATTGCTTGCTCTATTTGCTGTGTGAGACTCAGTAACAAGTGTCCCATGTGTTCAATGCCCATTGGGTATAACCGTTGCCGGGCTATTGAGAAGGTCTTGGAGTGTATTAAAATGTCATGCCCGAATGCAAATTATGGCTGCAAAGAGACACTTAGTTA | |||||||||
gi|192303773|gb|FG994583.1|FG994583 GLLEE75TF JCVI-SOY1 Glycine max cDNA 5', mRNA sequence TTAATCAAGGAAATCACGGTCG EST sequence (targeted fragment marked with yellow): GGATAATCATTGAGAGCGATGGTGAGAATCTCACTTGGTGGATACGATGATGGGGAAGGACCCAGCAACCGAACCCATAAGCGACGCAGGGAAGATGATGATGACGACGACGAAGAAGAGCAACAACAACAACGAAGCTTTGAGATGGTGGACCCTTCAATAGGAACTCAAGAGAACGAAGATCATGCTGCTCCATCCAATGATGGATCGAATTCTAACGGAAATGGGGCTGGAACCAGTACCCGGGATAGGTCCGTTCCTATCTTCGTTTCCGACCCTGATGTCCTTGATTGCTGCATTTGCTATGAACCCTTGACTTCCCTGTGTTCCAGTGTGAGAATGGACATATTGCTTGCTCTATTTGCTGTGTGAGGCTCAGTAACAAGTGTCCCATGTGTTCAATGCCCATTGGGTATAACCGTTGCCGGGCTATTGAGAAGGTCCTGGAGTGTATTAAAATGTCATGCCCGAATGCAAATTATGGCTGCAAAGAGACACTTAGTTACAGCAAGAAAAACGAACATGAGAAGGAATGCATCTATCTGCCATGTTCATGCCCTTTTACTGGTTGTGATTTTATTGCCTCATCCAAGGAGTTATTCCTCCACTTTAGCCATAGACATGTAGGCTCTGGAACACAGTTTACATATGATAAATTTTTCACTGTCTTCTTAAGTATTAACCAGAGAACAGTTGTTCTTAAAGAGAAAGTGATGGTAATCTGTTCGTTGTTCACAATAACCTCGAGCATCTGGGGACATAGTCCGCATTAGCTGCATTG | |||||||||