| mature miRNA: TTACTAACGGAATTACCGACG species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73884010|gb|DT486748.1|DT486748 WS02531.B21_N07 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02531_N07 3', mRNA sequence TTACTAACGGAATTACCGACG EST sequence (targeted fragment marked with yellow): TTTATAGGTGAGAAAACATTCTAATATCGATTGGCATTTGACAATCAAGATTCATAAACAGCGGCGGATCCATTGCATACGTGTAAACAGTAAATAGAGCAGTTGACACATATACCAAAACAGAAGAAAAGCAAATAAAATGGGAATGGAATGTGAATTACCACCATTGCGATCACTGGATGATTTTCTGCTTGGATCGGCTCGTTTTCAAGTACCAAATGTTCAGGACATGGATAAATGGGGAAATCGTGTTACCAAGAATTTTCTTTATTATCAAACCAATTATTTTGTGATGGGCATTATTGTGTCGGCATTGTTTACATTTTGTAATCCATTGCAAACGTTACTTGGATTGAGTGCACTAGCAATTGTAATAGCTGCAGTCATTGTAATAAATCCAAACCAAATTCAAGGTCAATCGCAACGCCAGGAATTTGCTGGTACAACTGGTTGGATCTATTTGCTGTGCATAACTGGTGTCATTGGTCTGGTACTTTATTTATTTCAATCAATTATGTATGTGACGCTATTGATTCTTTTACCATTTTGTTTGGCATTCATTCATGCATCGTTTCGATTACGAAATCTACGAAACAAATTATCAAATGCGATCGATGAACGTTTGCGTTACACCCCGATGGGAATATTCTTGGAGGCGATGAACATCGTCGTTGATTCCGTTAGCAAATAAGTAATTATAATTTGAAGTGATTTCGAAACGATCATTGAAAGTAAAACCATTTTAGAATGTCCATTGCTCATGAGCCTTAACAATATCAATATAATGCCTGTTATCAATTTGTCCCGAAATATTTTATGTAATTTGTTCACTTAATTAGCGTTTTAGTATTTATCGATACAATGAAAAGATTGAAGCATCATTCAATTTGTAATTATTTTCAATCAATTTGTTATTATCTTCGTTAAAGAAATGGCTTTTTACAATAAAA | |||||||||