| mature miRNA: TTACTCCTTCCGTCCGAATTC species: Solanum tuberosum database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|78748347|gb|DV624750.1|DV624750 95011.1 Cold Sweetening C Solanum tuberosum cDNA clone 95011 5', mRNA sequence TTACTCCTTCCGTCCGAATTC EST sequence (targeted fragment marked with yellow): CATAATTCAACCTTTATCAAACAAGCTCTTCAGAATATTCATTTGTGATTAAGATCTTTCAGCATAATTAAGAGAGACATTTATTTTGGCACTCCCAAGTAAGGAGTAGTTAATTAACAACTACTACTTGCATAAGCATATCTAGTTATTCACATAATTTATAGGTAAAGTCCCATACCATGTTGCTCAATCAGCCTTCGATGAATCTCTGTTGTAACTTCAGAATTCTTGACCGGCTCCAACAATGAAGCTCTTTCAAAGTTTCCAAGTAATCTCCAGGGGGCCTCCCGGTCTCGTCCCCGAACATCATAGCACCATGATGTAGTGCTCGACGAACTGAAACTTCAACATTTGTGTCCACTCTTCCAAGTGTTTCTTGAATATAACTGAAATACGGCTTAAAGATCCTGAAAAGTTCACTTATGGGGTCATGCCTTGCAGGTAAACCAACATGACTTGGAAAACCATTCATGTCATTCACATAAGATGGACGGAAGGAGTAAATCGGAGTACTTATGGAGTTGGGAACTTTTTGAAAGTTCTGATATGCATAACTTGGAAAACCGTTCATGCCATTGATGACACAAGTTGGAGAATTTCTACTGTCAATCCAACTTTGTTGCTGTTGGTAGGAGTAAATCGGAGGACTTATGGAATTGGGAACTTTTTGAAAGTTCTGATATGCATAACTTGGAAAACTGTTCATGCCATTGATGACACAAGTTGGAGAATTTCTACTGTCAATCCAACTTAGTGGCTGTTGGAGGGAGTAAATTGGAGGACTTATGGAGTTGGGAACGTTTTGAAGATTCTGAGATGGGCGCATGTAAAAAGCGTTCTTGTGTATTGTTCTTGGCACATTCTTAGGAGCATGGGTCGAAATTTAAACTTGAAGGTATTGCACTCACCCAATGAAAAGGGTCCATCCCTTTTGAAACCAGTCCCTCTTTTA | |||||||||