| mature miRNA: TTAGATTCACGCACAAACTCG species: Populus tremula x Populus tremuloides database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|23959409|gb|BU809001.1|BU809001 UL52PE03 Populus leaf cDNA library Populus tremula x Populus tremuloides cDNA 5 prime, mRNA s TTAGATTCACGCACAAACTCG EST sequence (targeted fragment marked with yellow): GATATCTAGAGGGCCCCTTAACAAGCCCATCTTCTCCCCTAACAAGAGGCGTCCTATCTCTGGTTTGTGCGTGGATCTAGAGGCCATCACAACCGTCCACTACAAGACCACCCAATGGCTTTAGATTCACGCACAAACTTGCGATCTGTCTCCTCTACTACACCGAATAGATCCGTTTTGGCGCCAATCCCTATACCACCTTTTCTATCTTCCCTCTCGAATTTAATACTCTATCAGCATATCTATCTATCTCTCCATAACAGATCTTGGAAGTCGAAAGAGGGGAACAAAATCAAAGAGATTCAGACCAGATCAGATGGCTACGGAGGAATCTGCGAGCGTGATGGATGATTATGAGACGTCGATCTCGACGACCGATGTCGAGCTCTTGAAAAGAGCGTGGCGTAACGAGACAGCTGCTCCGG | |||||||||
gi|18007045|gb|BI123070.1|BI123070 I017P21P Populus leaf cDNA library Populus tremula x Populus tremuloides cDNA, mRNA sequence TTAGATTCACGCACAAACTCG EST sequence (targeted fragment marked with yellow): GTGTACTATGCTGACCTTGTTGCTTATAGAGGAAGGCTCTACCATGAGGCATTAATGGAAGGGCAGTCTCCATCTTCTGTATCATCTTCATCATCTTCAAGGACTTTATCATCTCTGTCACTGGGAGCTTCGTTGGAAGAGAGGTTCTGCATGCTGCATGCAGACCTGGAAAACATCATGTATTTTGTTTCAAAATCTATTGGCCAGTCTCCATCACTTCAGGCAGTGAAAGAGATTGCCTGTGAAAATCTTTCGGCAAGTTCCCATCTATTCTGGCAGTGAAGGAGATCACCACCTCATCTCTTTTTGAAATGATGTTACGCAAACTCGCTCCTTTTCTAAGCAAATAAAAAATTAGTGAAGGAGTTTGTGCGTGAATCTAACTAGTCACAAATTCTTCTGTATCTACCATGGTTGCAGACCATGGGAATGGAGGAATGGCATGTCTTTTAGGTTTGTTTCTGCTTGGATGGCTGTTTTCTTTGTGTTTCTTGGTTTTCTATTACTAAGCCTCGTGTGTTTTAAACGTTTAAATGGCGTTATGCCGG | |||||||||