| mature miRNA: TTATTAAACCCGGACCGGTCCAGC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73887099|gb|DT489837.1|DT489837 WS02543.B21_F04 PT-MB-N-A-15 Populus trichocarpa cDNA clone WS02543_F04 3', mRNA sequence TTATTAAACCCGGACCGGTCCAGC EST sequence (targeted fragment marked with yellow): CAGAACCTGATTACACAAGTCAGAGTCGACGACCGGCTGCATATCAGCGGAGGATCAAGGAAAATATAGGTAGAGCTGATGGATGAGGTCCAACCCTTCTGTTGCCTGAATTGTACCTTTCAGATTTGGACATCCGAGATTTAATTGCTGGCATGTTTGAGTATTCTGTGGAAAGCGGATATGGAGGTTGAGGTTTATTTCAGTGTCAGAGAGTTCTGCTGAATATATTAATGTATACGTAGCAATACCTAATGCATTCTTCATTCGATTCTGATCAAAGCAAATATTTACATGGGTGTGTGGAATAGAGAGCAATATTGAGTCTGTTGTCTATTAGTGAATCCAAAGGTTTTAGACATTACTATAGCAACTGTGTAGCTGGAATCCTTTGAAGATCTGGTTTTGGTTAAATCCCTGATCGGATTATCCGTATCTCGAAGCATGGCCCGGTATTTGATTAATTGGATCAACTAGCTTGATGCTGCTTGTTTGTGAATTGTGACGGATTGCTGCTTTGTTGAGGTGCCGTTAAGCTGATTGGTGACAGAAGTACTCCACCACATCATAGCGCGAGATGGCATTATATTGTTTTCATATTCTACACTGGAAGTCTTGAGAATTGTATTATAATTGTTTTTCCTTGACCTGATTGCTGTCAACAAATTATTGATTTGCGAGTTTATTAATATTAGCTTTGGTGAATTCTGAGTTGAATGTTTTTTATACCTGGTCCGGTTACATGCTAGGTTGGTTAACCTGCCGTGTTGGACTGGACCGGATTTAATAATAATTGCCGAAGACTAGCTATATTATTTTCTTTGGCAAAAGAATCATTCCAAAAAAAAAAAAAAAAAA | |||||||||