| mature miRNA: TTATTGCCACTAAATGTCATT species: Lotus japonicus database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|45607532|gb|BP050852.1|BP050852 BP050852 Lotus corniculatus var. japonicus pods (less than 20 mm in length) Lotus japonicus c TTATTGCCACTAAATGTCATT EST sequence (targeted fragment marked with yellow): CTGCATGCAGCTAATCAACACAAGGAACCCGCTTATGATGACTTAGCATCAATACTAAATGCAGTTCAGGTGGCACCAGTCTTGTCACAACACCGCAAATATGCTTTGCTTACCGGAGAGCTTAGGGGAGTCCTTTGAGATTTTGACTATTTGAGGCCTAGCAGAAAGGCAACTGTTTTTTGTTGGAATTGGATCCCCTATTGTTGCTAAACTATTAAACCGGGTTAATTGTTAAATTAGTCCCTGATTTTGTAAGCGAGTTTGGTTTTAGTCTCTCGGCAAGAAAATGACATTTAGTGGCAATAATTTATGAATTACTGGCTGTTTTTTACCGCCACTAAACGTCACTTTTCTGCAAATGACTAAAATCAAACTTTCTTACAAAATCAGAGACTAATTTGATCATTAACCCTATTAAAGCAACATGTGTGCATGTCTAAGATTTTGAGCAGGCCTCGTACAAAAAATCACGTGAGAGAACTTTCTGATTACATTTGAACATACTAAACAGCCTGCAATTTTTTGGAATGGGGATGTAAATCCATTTTGGTTGCTCCCGTTC | |||||||||
gi|293518116|gb|FS346913.1|FS346913 FS346913 LjFL3 Lotus japonicus cDNA clone LjFL3-006-BH02.r0 3', mRNA sequence TTATTGCCACTAAATGTCATT EST sequence (targeted fragment marked with yellow): ACAGGAAGAGGAGTCCCCATCCAAACAGAGGACATAGGCCTCATCCACTTAAATCCCCAAAGTCATCACCAAAGCCATCACCAAGGCCATCACCAAGGCCACAGTCACAAACTGATAGACATAGAAATGGGAGAGGAAGTGGATCAAATTCTCCTCCTGATCATCAGAAAGGCAAGGAAAGGTAGAACATGTTTGGAAATCTTTCTGTAATTGATTCGAAAGTCAAGATCAATGCAGGGGAGAAACTTCGCTGAATAGCTTCTAAGTGTACCAGAATTGATTATGAGGAAAAGAACGGCTGCTGATAAGTTTGATAGGACACATACATAGTACTGTACATAGATATTTGCTATAAAATGCATGGTTTTTTTATTTAGTGTACCAACTACTAGCTAGCCTAGGTGAGTGGAATGAGGCTTGAGCCATCAAGCAAAAGGAAAAAACAGACAGAGACAAAAGAAAAAGGAGGGTAGGCGTGCAAGTGTGATGGTCCTCTTTTGTTTTATTTTTGTTTTTGGATACTCTTCAATTGAAGAAGGAGGTTAATTTTTAGTATAATTTGTGTATACATACGATTATAGATTTTGCTTGTTGATGAATTACAATTAGTGGCAATTACCGGCTATGATTTGATACTCTTCAATGAAGGGAGATAGTCAGTGATTATAATTTTTGTATAGTGTATACACACGATTGTAGATTATGCTTCTTGATGAATCAAAAGACTGGTCCAATTAGTGGACAATTACCAAAAAAAAAAAAAAAA | |||||||||
gi|45609137|gb|BP052457.1|BP052457 BP052457 Lotus corniculatus var. japonicus pods (less than 20 mm in length) Lotus japonicus c TTATTGCCACTAAATGTCATT EST sequence (targeted fragment marked with yellow): TTTAAAAATTTATTGATGTTGGTGCAGAGATGGACAAGAATGTCCATCTTGAACACAGCTGGTTCATACCAATTCAGCAGTGACAGAACTATTAGTGAATATGCTAGAGATATATGGAGAATTGAACCTGTTGCATTGGCTTGAAGACTTACACATGCTTGATCTTAGATTTTGACATACTCCGTTTGTAGAATTATAAGTGAGGTCTCCTTACTATGGACGTATTATTAGTTGGTTATAAAATTTATAAGGATGTCTATAGAAAAATTACCATAATTTTTAAAATGTAATAAAGGGTTAGTGGTCAACTTAGTCTCTGATTTTGTAAGCGAATTTGATTGTAGTTCTTCGGCGGAAAAATGACATTTAGTGGCGGTAATTTTTATAATTACTTGTTTTTTACTGCCACTAAACGTCATTTTCCGTCCAATGACTAAAATCCAACTTGCTTACCAAATCAGTTATTAATTTAACCCTTAACCCTATAATAAATTATTTGTCG | |||||||||