| mature miRNA: TTCAGGGTCAAGTTTGCATGC species: Chlamydomonas reinhardtii database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|14225561|gb|BG844377.1|BG844377 1024006B10.x1 C. reinhardtii CC-1690, normalized, Lambda Zap II Chlamydomonas reinhardtii cDN TTCAGGGTCAAGTTTGCATGC EST sequence (targeted fragment marked with yellow): NGTGGNNGGGGGGGGGGGTGNNGGNTTGGGGTGGGGGNGGGTGGGGGNGGGTGGGTGGGGNGTGGGGTGGGNNTGTGGGTTGGTTTNNGTGTTGTGTGGGGGGTTTGTTGTGTANNTGAGTGATTGTTTGGGTTGTATATTGNGTTTTGTGTTGAGGGTGTATGTTGGTAATGTTGGAGTATATAGTTTTTTTATTAAATTAATTTCGATTGTTAAAACGTACAGTTGGTGGGTTGGAATTTCTTCTATTTTATATAATTATTAATATTATGTATATATTTATTTATGCTATTAGTAGATTGCTGTTAAATGGTTATTTAAAGGNGTTGAGTCATTCGCGGCACGCGTCACTAACCTCACGTTCGACNATCTCTACCTTCACCCCTACTTTCTCTACATTCAACCTTGTTTTTCCTGTTATATGGGTGTCACTGCGAGTATTGAGGTTTGGTCGTGTCTGCCGTGTTACAGAGTAATATGCGAGAGAGCGGCGGCGGGTAGTAATGTGTAGTATTCAATGGACATGTATATATAAAATTATACGATAAAATCAAAGGACAGAGTATTTATAAATCTTTATTATAAGTAACANATTAAATAAAGACTAGAGAGGGTGAGGAAGTCAGGANGAGTAAGCTGACTACAGAGAAGTGAAGTACGACAATATAGACGTGAACCACGTNATCGCGGCTACACCGNGACTNTCGTAAAAGAATAGATCANGAGTAATANAGCAGATNACAAACAGTACGTACTATAGATGAGACTGAGAGTATGGNTAGACATACTACACATATATACACTAATCTTCTTCATCTAACGTCTCTCTACTATCACTGCTCCAACANATAATACGATCCACTACATATATCTACTACACGCGCCTATGCAAAAGCNATACCTTCTGACTCTTCATCCTCTTCTTCTTCCATCTNCGACGCTGTCTNGTGCTGCTCATTCTCTCAGCCGCCGTGTGCGTGNTCCCGCGATCGCGCCTCTGAGTGCGCTGCTCGCGACGCGCGACATTTTCNTCCTCTTCTTCACATAATCTAACTCCGACATATCACCAATCAACGTAACTCAACCACACACGTAAGTCTNGTCATGCTGGNATCGACCAGCCCGTACTGGGCTGGCTCAGTAGACACTANAGAGAGAAGATACACTAGANCGCGCGTCAGCGNCGTACGCGCTCGTACGTCGACCACGCACGAACGAGANGAGTATCATATCGACGCATCGTGATACGNGCAGTCCGTACCACAAAGAAGTAACGAAANTCNAGCTCGAAGATGNNANGATGCGTCGACACACACCNCCCTATTCAGGAGCAGTCGGTGACCGCTCCCANACCGACGCGTGNCGCGTATGATTGCGCGAGTTCGTGACGTGTCCGCGCNGCGCACTCCTCGCTCGTCACGTGTGGAACGTGCGTGCATACAGACATCACTGACACACGACATANATAGANNGACGAAATCACGACACAGTAACGACTAGNATCGACCATACATAGTAGATCCGATACTGCTCACAGCCACGCGTCGCCCGCGCAGTGGTGCTGCNTGGCTCNGCAGGCCANCGTCGTACGCAGCGGNCAATAGATGANGACTCGTAATNGTACACCCCGNGAGCCTTGACGGTGCACGCAACCNTGACCCTGGTGAGCTCCNAGCACGN | |||||||||