| mature miRNA: TTCCACAGCTTTCTTGAAC species: Coffea canephora database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|82472925|gb|DV693097.1|DV693097 CGN-37175 Leaf Coffea canephora cDNA clone cccl20o13 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CAAGGGCCCTTTACTCGTAGCTTGCATGATTGCAAGCGTCCTCCTATTCGGTGGTCTTGTGATTGTCTTATGGCATCTCTGGGATAGACAAACTTCAGTAGAGGAGCAAACCAAGGATGCTGGGAAGATTGGCAGTGTTCAGCAGAATGGTCATGCAACGCATAAAAATGTTGGCCAGGAAAAATATGTTAGTTCCATTCTCTACGGTCAAAGACCAGATTTTTGAGAAATTTTTGGATCAATTTCAGAAAGCTGGGGAAGTGTGGATATTGGTGTGATTGTTTGTGGACCTTCAACTCTTCAGACAAGTGTTGCTAGGGAATGTAGAACTAAGAATTTGAAGAGAAGAAAGAATGAGCCAATATTCCATTTCAACAGCCACAGCTTCGACCTCTAGTCACCATCCCGTGCATACTGTATAAATTTTCTGTAGCTGTATGATGTATAGGAAGAATAAGTCCTTCCGTACGGACTTAATTATTAGCTTCTTGATTGCACATTACGGATATATAAATAGATGCATGTATATCTGAGTATGAAGATTATGTAGCTAAACTATTACCCCTACAGGGATTATAAATAGATGCATGTATGCTTGAGTATGAAGATTATGTAGCTAAACTATTACCCCTACAGGGATTATTTTGTTGTTCTAAATTAGTTCGTTTAACCAAGTTAGCACTCAAAAAAAAAAAAAAAAAA | |||||||||
gi|81294074|gb|DV668188.1|DV668188 CGN-6737 Pericarp Coffea canephora cDNA clone cccp13h1 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CTCTGACTAAGTGCAAGCTCCGATTGCTCAAGCTCGAGCGGATCAAAGACTATCTTTTGATGGAAGAAGAGTTTGTCAGTAATCAGGAACGCTTGAAGCCTCGAGAGGAGAAGACTGAAGAGGATAGATCCAAGGTCGATGATCTCCTCGGCTCTCCTATGAGCGTCGGAAACCTAGAGGAGCTTATTGACGAGAATCATGCTATTGTTTCGTCATCGGCTGGACCGGAGTATTATGTCGGGATTTTGTCGGTTGTGGATAAGGATCAGCTCGAGCCTGGATGCGCTATTCTGATGCACGACAAGGTTCTTTCTGTAGTTGGCCTTCTTCAAGATGAAGTCGACCCAATGGTGTCTGTCATGAAGGTTGAGAAGGCTCCGTTGGAATCTTATGCCGATATTGGCGGATTGGATGCTCAGATACCGGAAATCAAGGAAGCTGTTGAACTTCCCCTG | |||||||||
gi|82454525|gb|DV681126.1|DV681126 CGN-20186 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w26e6 5', mRNA s TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TGTTAAAATTCTGAGGAAAGACAATCGGAGTCTTGATGCAGATGTTGCCGGTCTGGCCCTGGTCGCCGTTGAGGCAGTTAGAGACAAGGTCAACTCATCGTTGCACAGCATCAAGGAGCTATATAGGTCTAATCTATCATTGGCAAATGCGCTAATGGAATGCCAATACCACTACTATGTAATCCTCATAATTGATGTTCCAAAAGCTGTGGGATCAATGATAGAAAACCCAAGACTTGCTGAGCGTGGGATGGCTGATGCTGTTATAAAAGCTCAGGGGTGTGAAGCAAGTTTGAACAAACTATACCAGTCACCACTGGCTGACGTGAACGCTGCCGTTTATGACCTGTCTGTTGTGGCTCTGTCCA | |||||||||
gi|82462251|gb|DV688852.1|DV688852 CGN-31703 Leaf Coffea canephora cDNA clone cccl18k24 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CAGGAATTCGGCATGCGGGTCTGGACAACAACCCAAGGTTTTGGTCCTTGCACCTACTAGGGAGTTAGCCAATCACGTAGAGAAAGAAATCAAAGAGTCAGCATCATATCTAAATACTGTTTGTGTTTATGGAGGAGTTTCTTACATTACTCAGCAAAATGCAATTTCACGTGGAGTTGACGTGGTGGTGGGAACTCCTGGTAGACTTATTGATCTAATCAACAGTGGCAGTCTGAAACTTGGAGAAGTTCAATACTTAGTCCTTGATGAAGCTGCATATATGCTTGCTGTTGGATTTGAGGAAGATGTGGAAGTAATTTTAGAAAAGCTTCCATCAGAGCGACAAAGCATGCTTTTTTCAGCAACCATGCCTGGTTGGGTAAAGAAACTGGCTAGGAAGTATTTGGATAACCCATTGACCATTGATCTGGTTGGTGATGAGGAAGAAAAGCTGGCTGAAGGGATCAAGTTGTATGCCATACCAACCACTCCAACCTCTAAGAGAACCATCCTTAGCGATCTTATAACAGTCTATGCAAAGGGTGGAAAGACGATTGTGTTTACACAGACAAAGAGAGATGCTGATGAAGTTTCATTAGCACTAACAAATAGCA | |||||||||
gi|82506034|gb|DV712730.1|DV712730 CGN-61860 Cherry of Early Development Stage Coffea canephora cDNA clone cccwc22w23l19 5', mRN TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): ACGGTTCGTTGAGGAAGAGGGGAAGAAGTTCTCGAGTTAGTGGTTTTCTGAGTGATCCATTTTCCCAGATCAATTTTTTCAGATTCAGTTGAAAAATGGGTTTGATATCTGGGGTTGTGATGGGCATGGTATTCGGGATCGCGTTAATGGCCGGTTGGCAACATATGATGAGGTACCGAAGCAAAAAGCGTATCGCTAAGGCAGTTGATATAAAACTACTTAGCTCCCTTGACAGGGATGACCTAAAGAAAATATGTGGTGAAAACTATCCAGAATGGATATCTTTTCCAGTATTCGAACAGGTTAAATGGTTGAACAAACAACTTGCAAAACTCTGGCCATTTGTTGCAGATGCAGCAGAGGCTGTGATAAAGGAATCTGTGGAACCTCTGTTGGAAGATTATCGTCCTACTGGAATCACATCTTTGAAGTTTAGCAAACTGTCTCTTGGAACTGTGGCGCCTAAAATTGAGGGTATTCGTGTTCAGAGCCTTAAGAAAGGCCAAATCACCATGGACATTGACCTTAGATGGGGCGGTGATCCAAACATCATTTTGGGTGTTGAAGCTGCGCTAGTTGCATCTATACCCATTCAGTTGAAGAATCTTCAAGTTTTTACAGTTATCCGTGCTATCTTTCAACTTACCGATGAAATTCCGTGCATATCTGCAGTTGTTGTTGCTTTACTTGCTGAGCCTAAGCCAAGGATAGACTACACGTTAAAGGCTATAGGTGGAAGTTTAACACCAATTCCTGGTCTTTCAGACCTGATTGATGACACTGTGAATTC | |||||||||
gi|81292686|gb|DV666800.1|DV666800 CGN-4797 Seed of Late Development Stage Coffea canephora cDNA clone cccs42w2e20 5', mRNA sequ TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CTTTTCCATGCCAACAAAAATAAAAATATATGGTGCAAAAGCTACTAAGATATTATAAAATCATGGTCGAAGATTATTTACTAACTAATGTTTTATCCACTTGATGTTCAATCTGGCGTTCAGAAAACTGTGGAGGACTGTGTTGCCAAATTTAAGAGAAGTCCGTGAAAAGCCACCTTCTATTACAATTTCTGCTTGCTCTGAAGATTTTGATTCTGTTGATGCTCAACCCACGCAGAGCGAACCAGACAAAATAGCTGGGGAGACAGACTTTGCAGCTGACAGTATTGATTGGGATATTACATTGGACA | |||||||||
gi|82462035|gb|DV688636.1|DV688636 CGN-31386 Leaf Coffea canephora cDNA clone cccl11m20 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CTCTCTCTCTCTCTCTCTCTCGTGTGATATACTGGTACTACTAGTGTCTTTACAGTAAAACACTCGTCTCTTTTGTCATACAGAAAAAACCCTTTTAGGGTTAGATCCGATATTGCGTGCTTAGAGCCAGTTAGATATGGTCCTCTTCGTCTTATTCCACAGCTTTCTTGAACTGCATCTGGCTTTATCACTCCATGAATATGATTCTTGCAAGACTTCGGTGGAGGTGACGCGATGATGGCGGTTCAATAAAGCTGTGGGATGATACTAATAGGATCAACAAACTTCTCGCTCCGATTTTTTGGCTTTAGTTTTTAACTGCATGATATCTCAGGTTTTGTTTCTTTTTTCTCTTTTTTTTTTTCGGGCTTTCCCCTTCGTGTTCACAACAATAGTCACCGGCTTCTATAGTCTGGCCCGGAACCTGTAGATGCAGGTTTTGGATACTACAATATATATGTAGATGTCCTATGTTGTATAACCACAGAATTATTAGATTCTCAGCCTTTGACTTTTCCATCCGGCGAGGGAATGTTTTGTTTTTGTATGAAGCTAAATAGTTTCTCCCGTTATCAGTTATGTTCATCTGCAGCTTTTACCCCTCGAGACTAGCAGACTCGTGATCAGATCGTTTGATGTTCTGC | |||||||||
gi|82473315|gb|DV693487.1|DV693487 CGN-37643 Leaf Coffea canephora cDNA clone cccl2l18 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CTCGTGTGATATACTGGTACTACTAGTGTCTTTACAGTAAAACACTCGTCTCTTTTGTCATACAAAAAAAACCCTTTTAGGGTTAGATCCGATATTGCGTGCTTAGAGCCAGTTAGATATGGTCCTCTTCGTCTTATTCCACATCTTTCTTGAACTGCATCTGGCTTTATCACTCCATGAATATGATTCTTGCGAGACTTCGGAGGAGGTGACGCGATGATGGCGGTTCAATAAAGCTGTGGGATGATACTAATAGGATCAACAAACTTCTCGCTCCGATTTTTTGGCTTTAGTTTTTAACTGCATGATATCTCAGGTTTTGTTTCTTTTTTCTCTTTTTTTTTTTCGGGCTTTCCCCTTTTTGTGCACAACAATATTCACCGGCGTCTATAGTCTGGCCCGGAACCTGTAAATGCAGGTTTTGGATACTACAATATATATGTAGATGTCCTATGTTGAATAACCACAAAATTATTAAATTCTCGCCCTTTGACTTTTCCCTCCCGCGAGGGAATGTTTTGTTTTTGTATGAAGCTAAATGTTTTCCCCCGTTATCAGTTATGTTCATCTGCAGCTTTTCCCCCTCAAAACTACCAAACTCGTGATCAAATCTTTTGATGTTCTGCAAATAAGATGAGGTAGCTTGTATTTTATGTTTAATTCAAAAGCTGCTGCTCTTTATTTTATTTTTTCTT | |||||||||
gi|82479014|gb|DV699186.1|DV699186 CGN-44970 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w22m20 5', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AGAAAGACGAGGAAGGAGAAGTTGAAGAAGTAGATGAGGAGAAAGACAAGGATAAAAAGAAAAAGAAGAAGATAAAGGAGGTGACAAATGAATGGCAGCAAATTAACAAGCAGAAACCTCTCTGGCTTCGGAAGCCTGAAGAGGTTACCAAGGAGGAGTATGCAGCCTTCTACAAGAGCCTAACAAATGATTGGGAGGATCATCTTGCTGTGAAACACTTCTCTGTTGAAGGACAGCTGGAGTTCAAAGCTATTCTGTTTGTTCCAAAGAGGGCACCCTTTGATCTCTTTGATACACGGAAGAAGTTGAACAACATCAAGCTCTATGTCAGGAGGGTGTTCATCATGGAGAATTGTGAGGAGCTCATTCCTGAATACCTTGGATTCGTTAAAGGCGTGGTGGATTCGGATGATCTCCCACTAAATATATCTCGTGAGACGCTCCAACAGAACAAAATCCTGAAGGTCATCAGGAAGAATATTGTCAAGAAGTGCATTGAGATGTTCTTTGAAATTGCAGAGAACAAAGAGGATTATGCTAAGTTCTATGACGCCTTCTCCAAAAATATCAAATTGGGTATTCATGAAGACAGCCAAAACAGGGCAAAGCTTGCTGATCTTCTCAGGTATTACTCCACAAAGAGTGGGGATGAGTTGACCAGCTTGAAGGACTATGTCACAAGGGATGAAGGAAGGGCAGCAGGACATATATTATATAACCGGCGAGAGCAAGAAAGCTGTTGAG | |||||||||
gi|82447172|gb|DV673792.1|DV673792 CGN-9999 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w6l14 5', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CTTGAATCTGCTGAAACTAGGATGCTGCCAGTACCAAAACGCAAGCCCGAAGCTACAAGGTCGTCTTTTGATTTAAATATGCCTGTGGAGGAGATGGAACAAGACAATGATTGTAATAGCAGTGACTATGACTCTGGCTCTGAGAATACAAAGGGGTGGTTGGAAGATTTCTTGGACCAAATGGATGAAAATGTGGCCTTCAAGCCTTTCGATTTTGATGCTCTTGCTCAGAAAGTTTTGAAGGAAATCAGCCTAGGATTCCAGAAGATAGTTGGATCTAACTTTCGCCTGGAGATTGAGTCAGAAATAGTGGTGCAGATACTTGCAGCTGCTTGGTTATCAGAGAGAAAGAAAGCTGTGGAGGATTGGATTGAAGGAGTTCTCTGTACGAGCTTTAAGGAAGCCTTACAAAGGTGCACCCGTACCCCTGTTGCTGCAAATGTGATGAA | |||||||||
gi|82483844|gb|DV704016.1|DV704016 CGN-50703 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w29g20 5', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CCTATGAGCGTCGGAAACCTAGAGGAGCTTATTGACGAGAATCATGCTATTGTTTCGTCATCGGTTGGACCGGAGTATTATGTCGGGATTTTGTCGTTTGTGGATAAGGATCAGCTCGAGCCTGGATGCGCTATTCTGATGCACAACAAGGTTCTTTCTGTAGTTGGCCTTCTTCAAGATGAAGTCGACCCAATGGTGTCTGTCATGAAGGTTGAGAAGGCTCCGTTGGAATCTTATGCCGATATTGGTGGATTGGATGCTCAGATACAGGAAATCAAGGAAGCTGTTGAACTTCCCCTGACACACCCCGAGTTATATGAAGACATTGGTATTAAACCGCCTAAAGGTGTCATCCTCTATGGAGAGCCTGGCACCGGCAAAACCTTGCTTGCAAAGGCAGTAGCAAACTCCACTTCAGCAACTTTTCTGCGTGTTGTAGGAAGTGAACTGATTCAAAAGTACCTGGGTGATGGCCCTAAATTGGTGAGGGAACTCTTCAGAGTTGCTGATGAGCTCTCGCCATCTATCGTCTTTATTGATGAAATTGATGCAGTTGGTACAAAAAGGTATGATGCGCACTCTGGTGGTGAACGTGAGATTCAGAGGACCATGTTGGAATTGCTGAACCAGTTAGATGGTTTTGATTCACGAGGAGATGTCAAAGTGATTCTTGCAACAAACAAAATTGAGAGTCTTGATCCTGCACTCCTTCGCCCTGGTAGAATAGACCGAAAAATTGAATTCCCTCTTCCAGATATCAAGACAAGGAGGCGGATTTTCCAGATACACACGTCCAGGATGACATTGGCTGATGACGTCAATTTAGAAGAATTTGTTATGACTAAAGATGAGTTTTCTGGGGCTGATATT | |||||||||
gi|82471490|gb|DV691662.1|DV691662 CGN-35404 Leaf Coffea canephora cDNA clone cccl25i22 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AATAATATCCCTTTAAAATCAGATTCCAAAAATGGACTTTGAATCAGTGAACATATTGCTAGAGAAAGAAGGAGGCCCATATGAATCAACAGTGGATTCTATGCCCCAGAGATACTTTGAACCCTTTGTAGTTCAAGGCCTCAAGGTTGACCTCATTGAACGGGGTCGTATTGTCTGCTCCATGGTTGTTCCTTCTCGCCTTCTGAATACTGGGACTTCTTTGCATGGTGGGGCGACAGCCACGCTGGTGGACATGGTGGGTTCAGCTGTCATATACACCGTGGGGTCTCCGGTGACTGGAGTTTCCGTTGAGATCAATGTTTCCTACCTGGATGGTGCCTATGTTGGTGATGAAATTGAGATTGAGGCAAAGACATTACGAGTTGGAAAGGCAATTGCTGTTGTCAGTGTTGAGTTGAAGAACAAAAAGACAGGTAAAATTATTGCTCAAGGGCGTCATACAAAGTACTTAGCTTTATCAAGCAAGTTGTGAGGAACCCGCTCTTTGGTACCTTGTGCAATATTGACGGCAGATTGGCTTCTAAATGTCTGAGCCTCAACTTAAACAAGAAACTTTCATGTCTATTGAAGGCTAGGTTTTATGTCGTATTCATTCGGGTTCAAGAAGCTGTGCAGCTTATTTGGTGAGTGATGAATTGAACTTTCATGCAAGACTACTACTTGGTCATTTTAGTTTAAATTCTTGGTCATTAATACTTCATTTCCTTTCAAAAGCAGCACCGCATGATGCTAACAATCAAGAACTCGGTCTGCAGATAGATGCTTAGGTCCCCGTATCTTCTTCGAAAGGAAATGCTAAATCTTGTTTTTCTTCAAAAAAAAAAAAAAA | |||||||||
gi|82482457|gb|DV702629.1|DV702629 CGN-49044 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w28n6 5', mRNA seq TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AGAACAAAGAGGATTATGCTAAGTTCTATGACGCCTTCTCCAAAAATATCAAATTGGGTATTCATGAAGACAGCCAAAACAGGGCAAAGCTTGCTGATCTTCTCAGGTATTACTCCACAAAGAGTGGGGATGAGTTGACCAGCTTGAAGGACTATGTCACAAGGATGAAGGAAGGGCAGCAGGACATATATTATATAACCGGCGAGAGCAAGAAAGCTGTTGAGAATTCTCCATTCTTGGAAAAGCTTAAAAGGAAAGGATACGAGGTGCTTTTCATGGTTGATGCCATTGACGAATATGCTGTTGCACAGTTGAAAGAGTATGATGGTAAAAAACTTGTTTCTGCAACAAAGGAAGGTTTAAAGCTCGATGAGTCTGAGGAAGAGAAAGCAGCAAGGGAGGAGAAGAAAAAGTCATTTGAGAATCTTTGCAAAGTAATGAAGGATATTCTTGGAGAGAGAATTGAGAAAGTGGTGGTTTCTGACAGGGTTGTTGATTCTCCTTGCTGCTTGGTCACTGGGGAATATGGCTGGACTACAAACATGGAGAGGATTTTGAAGGCTCAAGCATTAAGGGACACCAGCATGAGCGCTTACATGTCAAGCAAGAAAACAATGGAGATCAACCCTGACAATGGAATCATTAAGGAGCTTAGGAAGAGAGCCGAGGAAGATAAGAATGACAAATCAGTTAGAGACTTGGTGCTGCTGCTTTATGAGACTGCTTTGTTGACCTCTGGTTTCAGCCTTGATGATCCAAACCAATTTGGTTCAAGGATCCATAGGATGTTGAAATTGGGGCTTAGCATCGAGGAAAATGAGACCGATGATGA | |||||||||
gi|82456274|gb|DV682875.1|DV682875 CGN-22982 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w23c15 5', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CACGAGGATTTTCTCTCATAAACAGGATGAGAAGTTTGACTCGTTTCATGCTTCTTTTTCCTTATGCGCTAGTTGTTCTAACCATTGTTCCGCCACTAATCTCTTGCGATCTCATCTCTGAAACATGTGACCAAACCCCAAATGATCGCCTTTGTGTTAAAATTCTGAGGAAAGACAATCGGAGTCTTGATGCAGATGTTGCCGGTCTGGCCCTGGTCGCCGTTGAGGCAGTTAGAGACGAGGCAAACTCAACGTTGCAAAGCATCAAGGAGCTAAAAAGGTCTAATCTAACATTGGCAAATGCGCTAATGGAATGCCAAGAAAACTACTATGTAATCCTCAGAATTGATGTTCCAAAAGCTGTGGGATCAATGAGAGAAAACCCAAGACTTGCTGAACATGGGATGGCTGATGCTGTTATAGAAGCTCAGGGGTGTGAAGCAAGTTTGAACAAACTAGAGCAGTCACCACTGGCTGACGTGAACGCTGCCGTTTATGACCTGTCTGTTGTGGCTCTGTCCATAATCAGGATAATGTTGCATAGAATCTATACTGTTAATTAGAACATGGTTGGATTCAATGAATAAAAAAATGATGATTGACGTCTAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|82460891|gb|DV687492.1|DV687492 CGN-29506 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w19a21 5', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TGCAGGAATTCGGTACCAGGCTGAAAGTTATTCCAAGCAGGGTAACGGGTAACCAGGCAGCGGAGCAGCTGCTGCAAAACCAGCAAGCATGCAACCAGCTCCCATGAAGACTTGCCAATATCTCATCATCCTCCTCCTCCTCCTGATTCTTCTTGTTCCCTCCTTTTCAGGAAGCTGTGGAAGTGATGGAAGCACGAAAGCTGTAAATCTGAAGATCAGCCCGCATTTCAAGGTGAGAAAACTTGGTGGTGTATACGTTCTTGATTACCATGAAGCTGGGCCCAATCCTTCACATGACCCTGGAAAAGGCAAAGGCGGCTCTAGGCCCTGAGGTCGGCAGGCAATGCTTATCCTTCTTAAATTCCAGTCGTCCAATCCAAACTTTTGGAGGTCCAAACTATATATATATATATATATATATATATATATATATATATATATCTAT | |||||||||
gi|119328056|gb|EE197559.1|EE197559 CC-F01_009_H13 Cherry of different development stage Coffea canephora cDNA clone CC-F01_009_ TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TCCGATATAATGCTTAGAGCGCTTAAAGTACAGAAACTGATCAGGTCGCCCGCACCCTTTACTTCTCCTAAGCCATCCGATATTTGTCCTAAACTTTCTGGCCTCCGGTTCCGGCAAGCTGTGCAAGGAACTGATATCAATCAGCCAGAGTGAGAGAGTCTTGACAAGATGGCTCAAGCTCCTAATGAAGAAATGGCAGTCGGAACGGATTCCTTGACTTCTCTGGGAGAAGCATATGCTGCACGTTGTGAGGAGGAAGGCTTTGGAGGTGTCATCCTCGTGACTGATAAGATGGCTCAACCTCCCAGTGAAGAAACGGCAGTCGGAACGGATTCTTTGACTTCTCTGGGAGAAGCATACGCCTCACGTTGTGAGGAGGAGGGCTTTNNNAGGGGTGATCTATGGGAAGTACATGACTGCTTCTAAAGATGAGGAAGATAATAATAAAGGGAGTGAAGCAAAAGAGGAGGAGGGGAAAGATCGAAATCAAGGCCGGGAGGCGACTGCATAGAGAGAGAGACTTAGCATGCGCGCCTGATTTCGNNTTATGTTTTGTGTGTGATCGGATGGCGTTATTGCACGCAACTTCACTTGTTTCCAAGGAAAGANA | |||||||||
gi|119327473|gb|EE196976.1|EE196976 CC-F01_007_D13 Cherry of different development stage Coffea canephora cDNA clone CC-F01_007_ TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTACTATGGCTCGTCAAACTTTTGAGAAGGAAGGTCCATTACTAGTGGTGGCATGTGGTAGAGATACTATTTCAATCGCAAGCTCGATAAGACGATTGGCATCTGATAATGTATTTGTTGTCCAGATTCAGCATCCAAGGTCCCGTTTGGAAAGATTTGACCTGGTGATTACCCCTCAGCACGACTACTATCCTCTGACTCCTCGGGCCCAGGAGCAGGTTCCTCGGTTTCTACGGAGGTGGATAACTCCACGTGAACCTCCAGATAGGCATGTTGTCCTAACAACAGGAGCTCTTCATCAAGTTGATTCTGCTGCTCTTCGTAGTGCAGCTAGTGCTTGGCATGATGAGTTTGCGCCTTTAGCAAAGCCATTACTTGTAGTTAACATTGGAGGGCCTACAAGGTATTGTCGTTACGGTGGGGACCTTGCAAAGCAGCTGACTGCCTCTTTACACAATGTTCTTGCAAGCTGTGGGAGTGTAAGAATTTCTTTCTCAAGGAGGACACCTGAAAAGATTTCCAATATTGTGGTGAAAGAATTTGGAACTCATCCAAAAATAAACATATNNNNNTGGTGAAGAGCCAAATCCACACATGGGGCATCTAGCTTGGGCTGATGCATTCATCATCACAGCAGNCTCAGTTAGTATGCTAAGTGAAGCTTGTAGNACTNNNNNGNCTGTNTATGNAATTG | |||||||||
gi|82481252|gb|DV701424.1|DV701424 CGN-47609 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w19g14 5', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CAGAAAAGAATCCCAGAACATGGCGACTCTTTCGTTGCTTCTCTTGTTTTCTTTGCTTTCTTTCTCATCAGCTGAGGACATGTCCATCCTGAGCTACGGTAACGCAAACCTAAAGACGAGTGGCAGTGGGAGGACGGATGAAGAAGTGATGGCCTTGTACGAGGAATGGCTAGTGAAACATGGCAAGTCGTACAACGGCCTAGGAGAGAAAGATAAAAGGTTTGAAATTTTTAAGGATAATCTTAGGTACATCGACGAACAAAACAGCTTGCCCAACAGGACGTACCAGCTCGGGCTGAACCGATTTGCTGATCTGAGCAACGAGGAGTACCGTTCCACTTACTTGGGAACCCGCCCTGATCCCAAAAGGAGGTTGGCCAAGACTTCCAGCGATCGCTACCGTCCAAAAGTAGGTGATAGCCTGCCGAACTCCATTGACTGGAGAGAAAAAGGTGCTGTTCTTCCGGTCAAAGATCAGGGAAGCTGTGGGAGCTGCTGGGCCTTCTCAGCAGTTGCTGCCGTGGAAGGGATCAACCAGATTGTGACTGGTGATTTGATCTCCCTGTCTGAGCAAGAACTAGTGGATTGTGATACTTCTTATGATGAAGGCTGNCACGGTGGCCTCATGGACTATGCGTTTGAGTTCATAATNNCACATGGTGGCATTGATACTGAGGAAGACTATCCGTACAGAG | |||||||||
gi|119326560|gb|EE196063.1|EE196063 CC-F01_003_C22 Cherry of different development stage Coffea canephora cDNA clone CC-F01_003_ TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGCCCTCCGCCACAGAAAAGAAATCCCAGAACATGACGACTCTTTCGTTGCTTCTCTTGTTTTCTTTGCTTTCTTTCTCATCAGCTGAGGACATGTCCATCCTGAGCTACGGTAACGCAAACCTAAAGGCGAGTGGCAGTGGGAGGACGGATGAAGAAGTGATGGCCTTGTACGAGGAATGGCTAGTGAAACATGGCAAGTCGTACAACGGCCTAGGAGAGAGAGATAAAAGGTTTGAAATTTTTAAGGATAATCTTAGGTACATCGACGAACAAAACAGCTTGCCCAACAGGACGTACCAGCTCGGGCTGAACCGATTTGCTGATCTGAGCAACGAGGAGTACCGTTCCACTTACTTGGGAACCCGCCCTGATCCCAAAAGGAGGTTGGCCAAGACTTCCAGCGATCGCTACCGTCCAAAAGTAGGTGATAGCGTGCCGAACTCCATTGACTGGAGAGAAAAAGGTGCTGTTCTTCCGGTCAAAGATNAGGGAAGCTGTGGGAGTTGCTGGGCCTTCTCAGCAGTTGCTGCCGTGGAAGGGATCAANNNNNTTGTGACTNGNGNNNTGATCTCCCTGTCTGNNNNNGNA | |||||||||
gi|82458059|gb|DV684660.1|DV684660 CGN-25678 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w19m13 5', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTTTCTCTCATAAACAGGATGAGAAATTTCACTTCTTTCATGCTTCTTTTTCCTTATGCGCTAGTTGTTCTAACCATTGTTCCGCCACTAATCTCTTGCGATCTCATCTCTGAAACATGTGACCAAACCCCAAATGATCGCCTTTGTGTTAAAATTCTGAGGAAAGACAATCGGAGTCTTGATGCAGATGTTGCCGGTCTGGCCCTGGTCGCCGTTGAGGCAGTTAGAGACAAGGCAAACTCAACGTTGCTTATCATCAAGGAGCTAAAAAGGTCTAATCTAACATTGGCAAATGCGCTAATGGAATGCCAAAAAAACTACTATGTAATCCTCAGAATTGATGTTCCAAAAGCTGTGGGATCAATGAGAGAAAACCCAAGACTTGCTGAACATGGGATGGCTGATGCTGTTATACAAGCTCAGGGGTGTGAAGCAAGTTTGAACAAACTAGAGCAGTCACCACTGGCTGACGTGAACGCTGCCGTTTATGACCTGTCTGTTGTGGCTCTGTCCATAATCAGGATAATGTTGCATACAATCTATACTGTTAATTAGAACCTGGTTGGATTCAATGAATAAAAAAATGATGATTGACGTCTAAA | |||||||||
gi|119329950|gb|EE199453.1|EE199453 CC-F01_016_E21 Cherry of different development stage Coffea canephora cDNA clone CC-F01_016_ TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AATGCTTAGAGCGCTTAAAGTACAGAAACTGATCAGGTCGCCCGCACCCTTTACTTCTCCTAAGCCATCCGATATTTGTCCTAAACTTTCTGGCCTCCGGTTCCGGCAAGCTGTGCAAGGAACTGATATCAATCAGCCAGAGTCAGAGAGTCTTGACAAGATGGCTCAAGCTCCTAATGAAGAAATGGCAGTCGGAACGGATTCCTTGACTTCTCTGGGAGAAGCATATGCTACACGTTGTGAGGAGGAAGGCTTTGGAGGTGTCATCCTCGTGACTGATAAGATGGCTCAACCTCCCAGTGAAGAAACGGCAGTCGGAACGGATTCTTTGACTTCTCTGGGAGAAGCATACGCCTCACGTTGTGAGGAGGAGGGCTTTGGAGGGGTNNNNTATGGGAAGTATATGACTGCTTCTAAAGATGAGGAAGATAATAATAAAGGGAGTGAAGCAAANG | |||||||||
gi|82446076|gb|DV672696.1|DV672696 CGN-8444 Pericarp Coffea canephora cDNA clone cccp23g1 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AGTTGTTCTAACCATTGTTCCGCCACTAATCTCTTGCGATCTCATCTCTGAAACATGTGACCAAACCCCAAATGATCGCCTTTGTGTTAAAATTCTGAGGAAAGACAATCGGAGTCTTGATGCAGATGTTGCCGGTCTGGCCCTGGTCGCCGTTGAGGCAGTTAGAGACAAGGCAAACTCAACGTTGCAAAGCATCAAGGAGCTTTTAAGGTCTAATCTAACATTGGCAAATGCGCTAATGGAATGCCAAGAAAACTACTATGCAATCCTCAGAATTGATGTTCCAAAAGCTGTGGGATCAATGAGAGAAAACCCAAGACTTGCTGAACATGGGATGGCTGATGCTGCTATAGAAGCTCAGGGGTGTGAAGCAAGTTTGAACAAACTAGAGCAGTCACCACTGGCTGACGTGAACGCTGCCGCTTATGACCTGTCTGTTG | |||||||||
gi|82454852|gb|DV681453.1|DV681453 CGN-20699 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w21o19 5', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GAAGTTTAAACCTCGTGAAGAAGATAAGGCGCTTTCTGAGGTGATATCAGAGACTTTGCACAAGAAGAAAGAAGAGGTCGGAAAAACAGGTGAATCAAAGCCAATGGGGAAGGTGACTGAGTCAGAGGAGGTAGCAAGGCGTCTTGGGACTGGAATGGAGAGGAAGAGAGAGGATGAAGATGCCATTGCTGCTGGTCGCGAAAGCAGTGGAAAGGGTATGGTAGATAGGCTTAAAGGGGCTGTCAGCTCATGGATTGTTAAAGGTCGTGAAGACCAACAATATTCTCAGGGGGCAGCTGATTCATCCAATGGTAAAAAATAAGCAAGTTTTACCATTAAGAAATATGCATTCTATCCACCTTTTTCACTTCCACTGTTTCATGCTTAATCCTAATAGGATTTTCCCATTCTTTTGCTCCTTGTACAGTAAGAAATGAAGGTTCTGCAGCTAGTGATGAAATCGGGCATCGCAGACTCCAAGAATCAGGCAATTGATGCAAGTTGGTCCTAGCTCTTCATCAGAGGTTTGGAGGCATGTTTCTGCTGCTGCTTTGCTACATGTTTTTAGGAAATATGGTTCAAGACAAAGTGAAAAATACCTTTGTGTCTAGAGTTATATGGACTCTATGCTTATTATGTATAAAGGATGAATATAATTACTGTGCTGTGTTTGGATGTTGTGCAAACATTGTGCCGTTTGTATGAAGTTTGTTGTTTGTAAAAAAAAAAAAA | |||||||||
gi|82457324|gb|DV683925.1|DV683925 CGN-24619 Seed of Middle Development Stage Coffea canephora cDNA clone cccs30w31j10 5', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): ATTTTCTCTCATAAACAGGATGAAAAGTTTCACTTCTTTCATGCTTCTTTTTCCTTATGCGCTAGTTGTTCTAACCATTGTTCCCCCACTAATCTCTTGCAATCTCATCTCTGAAACATGTGACCAACCCCCAAATGATCGCCTTTGTGTTAAAATTCTGAGGAAAAACAATCGGATTCTTGATGCAAATGTTGCCGGTCTGGCCCTGGTCCCCGTTGAGGCATTTAAAAACAAGGCAAACTCAACGTTGCAAAGCATCAAGGAGCTAAAAAGGTCTAATCTAACATTGGCAAATGCGCTAATGGAATGCCAAAAAAACTACTATGTAATCCTCAAAATTGATGTTCCAAAAGCTGTGGGATCAATGAGAGAAAACCCAAAACTTGCTGAACATGGGATGGCTGATGCTG | |||||||||
gi|82482086|gb|DV702258.1|DV702258 CGN-48599 Seed of Late Development Stage Coffea canephora cDNA clone cccs46w26f18 5', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGAATTCATTAGCTACCCAATTTATCTCTTGGTTGAGAAGACAACTGAGAAAGAGATCAGTGATGATGAAGATGAGGAAACCAAGAAGGACGAGGAAGGAGAAGTTGAAGAAGTAGATGAGGAGAAAGACAAGGATAAAAAGAAAAAGAAGAAGATAAAGGAGGTGACAAATGAATGGCAGCAAATTAACAAGCAGAAACCTCTCTGGCTTCGGAAGCCTGAAGAGGTTACCAAGGAGGAGTATGCAGCCTTCTACAAGAGCCTAACAAATGATTGGGAGGATCATCTTGCTGTGAAACACTTCTCTGTTGAAGGACAGCTGGAGTTCAAAGCTATTCTGTTTGTTCCAAAGAGGGCACCCTTTGATCTCTTTGATACACGGAAGAAGTTGAACAACATCAAGCTCTATGTCAGGAGGGTGTTCATCATGGATAATTGTGAGGAGCTCATTCCTGAATACCTTGGATTCGTTAAAGGCGTGGTGGATTCGGATGATCTCCCACTAAATATATCTCGTGAGACGCTCCAACAGAACAAAATCCTGAAGGTCATCAGGAAGAATATTGTCAAGAAGTGCATTGAGATGTTCTTTGAAATTGCAGAGAACAAAGAGGATTATGCTAAGTTCTATGACGCCTTCTCCAAAAATATCAAATTGGGTATTCATGAAGACAGCCAAAACAGGGCAAAGCTTGCTGATCTTCTCAGGTATTACTCCACAAAGAGTGGGGATGAGTTGACCAGCTTGAAGGACTATGTCACAAGGATGAAGGAAGGGCAGCAGGACATTTATTATATAACCGGCGAGAGCAAGAAAGCTGTTGAGAATTCTCCATTCTTGGAAA | |||||||||
gi|119327761|gb|EE197264.1|EE197264 CC-F01_008_G13 Cherry of different development stage Coffea canephora cDNA clone CC-F01_008_ TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CCACATTTCCCAACTCAGTCTTCTCCGGCCCTCCGCCACAGAAAAGAAATCCCAGAACATGACGACTCTTTCGTTGCTTCTCTTGTTTTCTTTGCTTTCTTTCTCATCAGCTGAGGACATGTCCATCCTGAGCTACGGTAACGCAAACCTAAAGGCGAGTGGCAGTGGGAGGACGGATGAAGAAGTGATGGCCTTGTACGAGGAATGGCTAGTGAAACATGGCAAGTCGTACAACGGCCTAGGAGAGAGAGATAAAAGGTTTGAAATTTTTAAGGATAATCTTAGGTACATCGACGAACAAAACAGCTTGCCCAACAGGACGTACCAGCTCGGGCTGAACCGATTTGCTGATCTGAGCAACGAGGAGTACCGTTCCACTTACTTGGGAACCCGCCCTGATCCCAAAAGGAGGTTGGCCAAGACTTCCAGCGATCGCTACCGTCCAAAAGTAGGTGATAGCGTGCCGAACTCCATTGACTGGAGAGAAAAAGGTGCTGTTCTTCCGGTCAANGATCAGGGAAGCTGTGGGAGTTGCTGGGCCTTCTCNNNAGTTGCTGCCGTNGAAGGG | |||||||||
gi|119330087|gb|EE199590.1|EE199590 CC-F01_016_M10 Cherry of different development stage Coffea canephora cDNA clone CC-F01_016_ TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTATTCCAAGCAGGGTAACGGGTAACCAGGCAGCGGAGCAGCTGCTGCAAAACCAGCAAGCATGCAACCAGCTCCCATGAAGACTTGCCAATATCTCATCCTCCTCCTCCTCCTCCTGATTCTTCTTGTTCCCTCCTTTTCAGGAAGCTGTGGAAGTGATGGAAACACGAAAGCTGTAAATCTGAAGATCAGCCCGCATTTCANGGTGAGAAAACTTGGTGGTGTATACGTTCTTGATTACCATGAAGCTGGGCCCAATCCTTCACATGACCCTNNNNNNNNCAAAGGCGGCTCTNNNNNCTGNNNTCGGCAGGCAATGCTTATCCTTCNTNNNTTCCAGTCGTCCAATCCAAACTTTTNNNANNNNNNNACTATATATATATATATATATATATATCTATGT | |||||||||
gi|119330967|gb|EE200470.1|EE200470 CC-F01_019_L16 Cherry of different development stage Coffea canephora cDNA clone CC-F01_019_ TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GCCACAGAAAAGAAATCCCAGAACATGACGACTCTTTCGTTGCTTCTCTTGTTTTCTTTGCTTTCTTTCTCATCAGCTGAGGACATGTCCATCCTGAGCTACGGTAACGCAAACCTAAAGGCGAGTGGCAGTGGGAGGACGGATGAAGAAGTGATGGCCTTGTACGAGGAATGGCTAGTGAAACATGGCAAGTCGTACAACGGCCTAGGAGAGAGAGATAAAAGGTTTGAAATTTTTAAGGATAATCTTAGGTACATCGACGAACAAAACAGCTTGCCCAACAGGACGTACCAGCTCGGGCTGAACCGATTTGCTGATCTGAGCAACGAGGAGTACCGTTCCACTTACTTGGGAACCCGCCCTGATCCCAAAAGGAGGTTGGCCAAGACTTCCAGCGATCGCTACCGTCCAAAAGTAGGTGATAGCGTGCTGAACTCCATTGACTGGAGAGAAAAAGGTGCTGTTCTTCCGGTCAAAGATCAGGGAAGCTGTGGGAGTTGCTGGGCCTTCTCAGCAGTTGCTGCCGTGGAAGGGATCAACCAGATTGTGACTGGTGANNTGATCTCCCTGTCTGAGCAAGAACTAGTGGATTGTGATACTTCTTATGAT | |||||||||
gi|82464445|gb|DV691046.1|DV691046 CGN-34624 Leaf Coffea canephora cDNA clone cccl25i9 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CCCGGGCTGCAGGTGGAATTTCCCCATTCCTGGCCCCCTTAAGTGACGTCCTGCACCACATAAAGGAGGGAAAACCATGTCTGCCGAAAAACATTTTGATAGTTTGGGCTGTGAAAAAATCAGATGAACTTCCACTTTTGCAGACAGTTGACATGGAGTCCATTTGTCCATTCTTTTCTGAAGCACTTAATCTTGAGGTTCAGACCTATGTTACTCGAGAATCAGAACCTCCATTGGAAGAGGGCCAAATTTACGAGCCTCCCAATTTTTGTACCTTCCGCCATTCAAACAAAAGTGGAATGTCTGTTTTGGTAGGCACTGGCAACATCATATGGCCTGGGATGTACATCATCGTCTCTGCAATTGGCTTAGCTGTTCTTGTTGGCTTGCTAAATGTGTTTTACATAAATCCCTTTCATATAACTTGCTGGTGGTACAAGGGGCTTCTACTCGTAGCTTGCATGATTGCAAGCGTCCTCCTATTTGGTGGTCTTGTGATTGTCTTATGGCATCTCTGGGATAGACAAACTTCAGTAGAGGAGCAAACCAAGGATGCTGGGAAGATTGGCAGTGTTCAGCAGAATGGTCATGCAACGCATAAAAATGTTGGCCAGGAAAAATATGTTAGTTCCATTCTCTACGGTCAAAGACCAGATTTTGGAGAAATTTTTGGATCAATTTCAGAAAGCTGGGGAAGTGTGGATATTGGTGTGATTGTTTGTGGACCTTCAACTCTTCAGACAAGTGTTGCTAGGGAATGTAGAACTAAGAATTTGAAGAGAAGAAAGAATGAG | |||||||||