miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse




mature miRNA: TTCCACAGCTTTCTTGAAC
species: Gossypium hirsutum
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|109858429|gb|DW487408.1|DW487408 GH_RMIRS_063_G04_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTCCACAGCTTTCTTGAAC
||| ||||||||||.| |
TAGGAGTCGAAAGAATTAG

EST sequence (targeted fragment marked with yellow):
AACAATCTGTTTTCCGGTAAAATCCCATCATCTATACGTTCGTTTCGAAACCTTCGGTTCTTTGATTTCTCAGGGAACAATTTCCTTGAAGGTTCTGCTCCATTGATGAGCCAAATTGATGAATCAACAGTATCTCAGTACCCCAAACGGTACACTTTTGCTGAGAGGAAATCAACAAACAATAGCAGAAGCAGAGCTCAAGCTCCATCACCAATTGGAAGCAAATCAGTAACCGGCGAAGGTCCTAGCTCATCACCAGTAACTCAACACCGACACAAAAATAAGAGTAAAAAAGCAATGGAATGGCTGTTGGGATTCTTTTCTGGAGCTGTAGGTGGGGGCATATTTGGGTTCGTCTTCTCTGTTATGTTTAAACTGGTGTTGGCAACCATTTTAGGAGCTGCTAAAGATCCTGGTCCATCCATATTCAGTCCATTGATTAAGAAAGCTGAGGATTTATCGTTTTTAGAGAAAGAAGATGGGTTGGCTTCATTGGAGATCATAGGGAAAGGGGGGTGTGGGGAAGTATATAAAGCTGAATTACCAGGAAGTGATGGCAAAATGATTGCTATTAAGAAAATTATTCAACCCCCAAAAGATGCAGCTGAGTTAACTGATGAAGATAGCAAGCTTCTCAACAAGAAAATGCGTCAAATTGTCTCGTCCTCTGCCTGATG



gi|109873901|gb|DW502876.1|DW502876 GH_TMIRS_069_H10_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
|.|||||||||| ||||||
AGGGTGTCGAAATAACTTG

EST sequence (targeted fragment marked with yellow):
ACGACCCTATGAAATGAAAACTCACCCTTTTTCCCATTTCTTTCTCTCTCTTTTTGTCCTTTTGGATTTTGCAGCCATGGCTGCCTATGAAGCTTTAGGGTTTTCCCTTTCTTTTCCTCTTTTGCAGAAAAAGGTTGGTAGCGATAAGAGGAAAAAGAAAAGAAAGAACAAAAAACATGGCTCTCTTCGTATTCTTCCACAGCTTTCTTGAACTGCAATTTCATGTAATCAGATCATTCATTCATTCATTGTCGTTGATGGTGTTGCATACATACGAGTACGTTGTTGCGGTTCAATAAAGCTGTGGGAAGATACAAACAGGGTCAAAGTCAAGGTCAAAAAGTCAGTGATTTAATAAATTCAATGTTCATTTCTTCTTTACATGATCTGAATATGTTTATCTCTGTATTCTTTTATATACAATTACAGCCTACGCTACAATTTAGAGCATGTTAATCCTAAGACTCGAACTTGGTCTCTGCGCGGGGATATCTCTCATAAGGAGATCCTATTTTTCTAGAGGGGCCCCCCCCGGGGGAGAACCCCCT



gi|109872689|gb|DW501664.1|DW501664 GH_TMIRS_058_H08_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
|.|||||||||| ||||||
AGGGTGTCGAAATAACTTG

EST sequence (targeted fragment marked with yellow):
AGGAAAAAGAAAAGAAAGAACAAAAAACATGGCTCTCTTCGTATTCTTCCACAGCTTTCTTGAACTGCAATTTCATGTAATCAGATCATTCATTCATTCGTTGTCGTTGATGGTGCTGCATATATACGAGTACGTTGTTGCGGTTCAATAAAGCTGTGGGAAGATACAAACAGGGTCAAAGTCAAAGTAAAAAAGTCAGTGATTTGAAAAATTCAATGTTAATTTCTTCTTTACATGATCTGAATATGTTTTTCTCTGTGTTCTTTTATATACAATTAAAGCTTACGTTACAATTTAGAGCATGTTAATTCTAAGACTCGAACTTGGTCTC



gi|164327818|gb|ES813178.1|ES813178 UFL_272_41 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||.|..|||
AAGGAGTCGAAGGGGCTTC

EST sequence (targeted fragment marked with yellow):
GGCACGAGGGAGATGGAGGTGACGTGTTTGCTATCTCCAAATCGGAGTGGAATCCTCCTAGGAGAATGGATTTGTCGGAGATTCCGTTGGATGTTCTGTTTCCGGTTGAAAAACCACCGGCTTCTTCTAGATTCGGTCACCGTAAACCTGTTAAAGCCAATCCTGAAGGTGGCCGAGCATTGAAAGTGGCGAAACCCAAACGCCATGAGACACTGGAGAACACGTGGAAGATGATAACGGAAGGGAGAGCGATGCCACTGACGAGGCACTTGAAAAAGTCGGACACGTTTGAGAATCACGGCCGCGAGATCAACGTGGAGACGATGGCCGACTCGCCGTTGGTGAAGAAATCGGAGACGTTCAGGGACCGGACTAACTACCAGCTTCCGCCGAGCTCTTCTCCGGCTTCGGGGAAGCTGAGGAAAGAGCCGTCGCTGAGTCAAGACGAGTTGAACCGTCGAGTGGAAGCGTTCATAAAGAAGTTCAATGAGGAAATGAGATTACAAAGGCAAGAATCACTAAACCAGTATATGGAGATGGTTAACCGTGGATGTTAGCCACTAATTATCGTTTAACCATAGTTTTAAATCATGTTTTTTTTAAGTAACAGAAAATATGTTCATTAAATTTTTTTTTTAAATATGTTTCCTCCATTAGGTCAAAAAGTTTGCGGAGACTTGGAGTTGAAAAAAATTTGAAAAAATACCCAAAAAAAAATGAAGAAAAACTGAGGGTGTAGATTTTATGGTACAGCTAGTTTTGAGTGGTATTAGAATCATTAATGGTAATTAAAAGTACTGTAAATTAAAGGAATTTACTGTTTGTTTGTTTTTTGGTTTAAATTCATATTTCAATGAAAGAATTGATATGTTTTTTAAAAAAAAAAAAAAAAAA



gi|84146399|gb|DN760641.1|DN760641 G.hir-stem 3148 PCR amplified cotton stem cDNA Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||| ||||||
AAGGAGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
CAAATAATCCTCTTTGATTTACAAGAGAACTTTCTTGTAGTCTAGACAAGTAACTTGAGAAGAAATGGAAGACAAGGATTTAATTGCCAAGGATGTCACTCAATTGATCGGCAAAACGCCACTGGTATATCTGAACAAGGTTGTTGAGGGATGTGTTGCTCCGATTGCTGCGAAGTTGGAGGCAATGGAACCCTGCTCGAGTGTCAAGGATAGGATTGGCTATAGTATGATTGCGGATGCGGAGGAGAAGGGTATCATTAAACCGGGTGAGAGTGTCCTAATCGAGCCAACCAGTGGTAATACCGGGATAGGATTGGCATTCATGGCAGCTGCTAAGGGTTACAAACTTGTAATTACGATGCCTTCTTCAATGAGTTTAGAAAGGAGAATGGTCCTCCGAGCTTTTGGAGCTGAACTTGTTCTCACAGATCCGGCTCGCGGCATGAAAGGGGCTGTTCAAAAAGCTGAGGAAATTCATGCAAAGACGCCAAATTCTTTCATTCTTCAGCAATTTGAAAACCCTGCCAACCCAAAGATCCATTACAAGACAACCGGACCAAAGATATGGAAAGGCACCGGCG



gi|109863294|gb|DW492271.1|DW492271 GH_RMIRS_090_E09_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTCCACAGCTTTCTTGAAC
.||||||| |||||| ||
GAGGTGTCTAAAGAAAATG

EST sequence (targeted fragment marked with yellow):
ATCAGGCAGAGGACGAGACAAGTGTGTGTGTGTGTACATATATGTACCAGATGATTCACATTTCCTCATGAATGAAAATTATCAAAATTTATCTTTTCTCTCTAAATTCTCCTTTGTTTCTGGTCTCCATCTTCTTCTCTCTTCTCGCAATTACCCCTTCTTCTTCAAATGTTCTTTACTAGTCACTTATTCTGTGACAATTTAGTCATTCAATCATTTTGCGATCATTATGATTTTAGTTTTAATAGCTTGCACATTACAGAAAACAAAAGCATAAAAAATCAGCAGTGTAACAACAAACGAGAGGCCAATTCGTTCTAAAAGTCGAAAAGTAAAGAGCTTTTTTCAGAAACTTACATGGACTCATCATCAGGGTGCGCAACAACCAGCAAGACATTTTTTGTGTGTAAAGGTGTACCTGGTTTCAATGGGTAAATAAATATTAATTGAAACAAAATCAACAGGTAAAAGAAATCTGTGGAGTTACCTTCATTTAAAAATGTGGGTTTTGAATGGGAGAAGAAAATCTTCCAAAGAGAAGCTACCCAGACGATGGAAATTGAAATAATGATAAAAATCAATCCCATAAGAAAGACCAACCAAAATATTCCGAAAAGATTAAGAACAAGAGTCCAATATTTATATAATATAAGGTTTCCCGGCGGGAGAATGAAATCAAAATGGGAAGGCAAACAGAAAAGAAAGAAAAAAAAAT



gi|164331052|gb|EV487205.1|EV487205 116B06 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||| ||||||
AAGGAGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
ATTGTACTGAAAAAACCATCTTCTTGTGAATTCTGCAACTTTTGGAGTAACTTAAAGAAGAAATGGGGGAAAAGAGTTAATTGCCAAGGATGTCACCGAATTGATCGGTAACACGCCACTGGTATATCTCAACAATGTTGTAGATGGATGTGTGGCTAAAATTGCTGCCAAGTTGGAGGCAATGGAACCCTGCTCCAGTGTCAAGGACAGGATTGGATATAGTATGATTGCAGATGCAGAGGAGAAGGGTCTCATTGTACCAGGCGAGAGTGTGCTGATCGAGCCAACTAGTGGTAATACCGGAATAGGGTTGGCATTCATGGCAGCTGCTAAGGGTTACAGACTCATAATTACAATGCCTTCTTCAATGAGTTTAGAAAGAAGAATGGTCCTCCGAGCTTTTGGAGCTGAGCTAGTTCTTACGGATCCAGCCCGGGGCATGAATGGGGCTGTTCAAAAAGCTGAGGAAATTATGTCAAAGACTCCTAATTCTTACATACTTCAGCAATTTGAAAAACCTGACAACCCAAAGATCCATTATCTGACAACCGGACCGGAGATATGGAAAGGCAGTGGAGGAAAAGTAGATGTCTAGACTCTGGTATCGAGACTGGAGGGACTGTAACAGGAGC



gi|164246232|gb|ES827827.1|ES827827 UFL_300_76 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||| ||||||||. |||
AAGGTTTCGAAAGAG-TTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGCGAACTGCCACGAAGAAGAATAGGCGGCCTCGTGCGACGAAAACGCCGGCGGTCAACGATTCGTCACGTCATGCGTTAAGTCAGCGGGATCAGCGGCGAGAAGGAGAAGGAGAAGACGATGAAGAACAAAAAAGGCTTCTCGGCTCGTTAATGGAAGCCTTCGGTTCGATCTCTCTAGAAGAAGCCACGTCAGCTTATAACCAAGCCGACGGTGATTTGGACAAAGCGGCCGAGATTCTATCCAATTTGATCGATAACGGTAACAATAGTGAAGATCCCGATCCGTCAACGAGCTCGATATCGAGTGGCTCGTCATCGTCAGGTTCTTCCGGGTTCGGTTTTTCCGAAACGAGTTGCTTACAAAATCTGAATAGCGGAAGGGGACGTAGCAGATGGGGAAAACAGCAGAAGCGAGTGGTAGCGTCAACGGGGACGGTTTCGACCGTCCTCGGGAAAGATTACGTTAGGTCAAGCCCATGGCGAGACCCGGCTGCAGTGGCACCGGCGACATCGGTGTTGGCGACGGAAGAAGCGGAACAGTTTTTATGCTCAATGCTTTGGGAAGAGTGTGAACTTAGCATGGCTGTTGTTAGAGATGTTTTGTGTCAGTGTGGGGTACAATGTTGAGAAAGCTTTGGAATGCTTTACTTGATTTATCTGCCTCCTCCTATTGAAAATCCCAGAGTTTTTATGACCATTTGCACAGTAGACAAGATACCAGATTCGTAATTTGATGGGCAGACAATTTAACAGAATAGGACACCTGACTGGATATCTTAATTGTTGGAAAAGCAACTTCAAGATAGTATATGGGCAGGCGGATATGGGCACAGGAATTCTCCTAAGGTCTTGCTAGTTCTGAACCTATGCAACACCTTGGCCAAAGGGATATGGGGTCAATTCTCCCTCAGAAGTCCTGGATTTTTTATTAAAAATCCCAAAAGTTCTGAGCATGAACAAAGCACTATGAGTTGGAGGAATGTAGTAAAGAAAATGCAGTTGTTGGGACCACCTATTGATTTTTGTCATTCTACTGTTGCAAAACTTCCGCAGGAAATTTTTTCTTAAGGGGGATAAAAATTCAAATTTTAAGGAGGGTGCCCAAAAAAATTTGGGATTCCTGGGAATTTTTTTATTAAAAAGGGGTGCTTCCTCATTTTTTAAGGGGGGAAGTTGGGGATTTTTGCGCCTTTTTTCTCTTTTTTATTCGGGGGAAGAATAAACAAGGAAAAAAAAGTGGTGGCCGGGGAGACGAAAGAAATAAAAAGGGGGAGGCCCGAGAAAATTTATTTT



gi|73848012|gb|DT457032.1|DT457032 GH_ON33O12.r GH_ON Gossypium hirsutum cDNA clone GH_ON33O12 3', mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||||| . ||
AAGGTGTCGAAAGA-TGTG

EST sequence (targeted fragment marked with yellow):
ATTATAGCAGCTAACTTTGTTCGGAACCCTTCACCCTTATAATGTAAACCTTAAATGTTGTACGTTGGAGTAACTGAAACACGACTGCATCACCATCGACCAACCTGTGAGCGACTGCAAACCCTTTCCATCCACCGCTAAGTCCTGTTTTTTTAGCCAAATATATGGTTGGATACTCATGGCCTTCTTCATCTACCAAAGTCATGACCTCATCGCGCTTGGGAAGATTTGTCTTGCAGAAATGGACCGGTAGGCCCAGCCAAAATCCACCGGTAACATGTGATTGAAGCATGGACTTAATGAAGACAGGAAAATGAGGGTCTAAACCAGATTCCAATTTTTCTGCTTTCTCCAAAGCCTCTGCTCTAGCTTCATCTGAAGCATACACCCGGTTTGACAGATCCCTATGCTTAGATACCCTTCTAGGTATCATCACTTTATCCACAAGAACTTCTTGGTAAACCGGGGCCGGTTTGTTGGCGACACGACTCGATCTTCTAACCACAACCAATTGTTTTTCGACTGTCCGAAGCTTCATCTGTTTCCTCGGAGAGGGTTTGAAAGATGGGGTATGAAGAAGTGTAGAAAGCTGTGGAAGATTGAGAGCTTCCATTCTTTTCTTGTTTTCTTCCACACGTTTCTGACGGATTTCCTCGTAGGACATCATCTTCTCCTTTGCTACCACCATTGTTATGTTGTTGAGAATTAAAATCAAAAGCGCTTTGGCTAAATGGGATTGGATTGGCGCTGTGATTTAAGAACAACCCCACTCGACCCGGACGCGTGG



gi|164360365|gb|ES807370.1|ES807370 UFL_647_17 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.||||||||||||||| |
CGGGTGTCGAAAGAACT-G

EST sequence (targeted fragment marked with yellow):
GGCACGAGTCTATCTCTTCTTATCCATTTGTTTCATTCAGAATTCACTACAGATCCGTTACGAACCCAAAATCCATCCTCGTACTCTGTTCTTTCTTTCTTCTTTGAATCGTTTCGCATTTTTCTCGTGCTCTTGCAGGTGGTATCATCAGCAAGCTTTATCAAGAAGAAACTAAATTATGAGATAGCATCCCCTTCTTTGCTTTTTCTTTTTTTTGAGGGGGTAGGGAGAGGGTTTCATTAATTGATATCAATCCAAGTCCCGTGAATCAGTGAATTGGTTTTCTCTAAACCCAAAACTCACATTCAAAATCTGGGTTTCTCTTTTTTTTCTTAGAAATTTTAAATTAAATGTGAAGATAATTGCGGAGTTTTTGAGGATCTGGGTATTTTTGAGAATCGATTAACAGAAGGAAAAGAAAAAGAATGTTGGAGCAGGAATTGTGTTCATCTCGGGTACTGTCACCGTTCAGGGAAGAAAGCGGCGACGAAGAGCTATCGGTTTTACCGAGACACACCAAAGTTATTGTCACTGGAAACAATAGAACAAAGTCAGTATTGGTTGGTTTACAAGGCGTAGTCAAGAAAGCTGTGGGCCTTGGTGGTTGGCATTGGCTGGTTTTGAAGAATGGTGTTGAAGTCNAGTTGCAAAGAAACGCATTGAGCGTGTTGGAACATCCCTACCGGTAACGAAGTAAACGGTGATCATGATTTCCATAACTCGAGCAGTGGCTCT



gi|84153547|gb|DN802902.1|DN802902 G.hir-15-20 DAA bolls irrigated 1105 15-20 DAA bolls from irrigated plants Gossypium hirsutum

TTCCACAGCTTTCTTGAAC
.||||| ||||||||| |
GAGGTGACGAAAGAACGAG

EST sequence (targeted fragment marked with yellow):
CCTTTGGTCATGGCCAGCAATTTCTTCGAACAAAAGCCCTTCAAGCCACCTTTTGAGATCATAGCCAGGAGAACGAAAACACTCGACGTTAAATACAAAGAATGCAAGCGTAACCATGCACCTCAACTTGGTATCAATGTTGTGGATGGTTGTGGAGAGTTCGCTCCCAAAGGAATGTCGCCGTCGTCGGAAACGGGACATGTCGTGGATTTTGATTGTGAAGCGTGTGGTTGTCATCGGAATTTTCATCGCAAAGAAGTGACGAAGCAGGTTAGCATAACGTTCATTGACAACGAAGGAGCCAATTTATATCGTTTTCAGCCACGATCTCCTCAATTGAACAATGAGCAAGAAAGCAGTGGAGAATGGAGAGTTGGATGGGGGAATGAAGANACCCAAAAAAATGATGAATCNGATGTAAAA



gi|164338041|gb|ES814410.1|ES814410 UFL_211_54 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||||.||||| .||||
TAGGTGTTGAAAGTGCTTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGCGAGAGATAATCTTGGAGTGCACGTCAAGCAATCTTCATAAACAAGAATTCACCTCCGAACCATCTCAACCGGGTAAGCACGACGACAGAAGCCAATGCAATGGAGATTTAAAGCTAATACATGCACCAGAAACACCACAAAAGGCGACGATGGAGACTAAACGGAGACTCCAACCCGAAAACCGAGTCAAAACAACAGAAAACGCGCAAGAAAGATCGATAATGAACACATTAACGATGCTCCACGATTACGAGAAAAAGATCAAACAAGATCCTCAGAGCTTAGAAAGAGCTGAAGCATTGGAATCATTGTTGGAGATTTGTGCTAGTTTACTTAAACAGCAAAGACTTGAGGAACTTGCAGGGGTTTTAAGACCATTTGGTGAAGAAGCTGTTTCATCAAGAGAAACAGCAATTTGGTTAACAAAGAGTTTGATGAATGCTAAAAGCAAAATCCCAATAGATCATAGGAAATGAATTGTGAGTTTTTAACAAAAAAATCCAGCAATAGGTAACTCAATGATGTTTTTTTTTGTGTGGTTTTTTTTTTTTAATTTTGCTATTAGTTTTTGTAGTTCGTGAAAGTTGTGGATTTAATTCCTATAATTTAATTAATTTTAATCCATGCAAAAAAAAAAAAAAAAAACTCGAGTGAGTTTGGAAATGTTAGCTTCTAATTGTCCAAATTTAGAACGGTTAGCCTTATGCGGTAGCGATACAGTTGGTGATGCAGAGATATCTTTTATTGCTGTGAAATGTATTGCTTTAAAGAAGCTTTGTATCAAGAATTGCCCTGTTTCGGATCATGGCATGGAAGCGCTTGCTAGTGGTTGCCCTATTTTGGTTAAAGTGAAAGTGAAAAATGGAGAGGAGTTACTTCAGAAGGGGCAGATGGGTAAGAGCAACTCGAGGACACTTGGTGTTAATTGGAATTCATTTGGATATGGGCGAGATTTAGATGCAGTGCCATGATGGTGGGGCCAAAAAATGGAATGAATTTCCTCAAGGGTGGCCATCAAATGGAGCTTCAGTATGGATCGAGCAGAAGGGGCGATCAAATCATTCAAGTTGTGGGGTTTGGAGGGGGAGGATTTTGGGGGTTTGCAATTAAGGGGGGGGGGGAGTAATTTCGGGAAATTAATCTGGAATTGGACAACAAAAAAAAAAAAAAAAAGGGGAAAAA



gi|109891552|gb|DW520515.1|DW520515 GH_TMIRS_241_C12_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
||||||||||||| |.|
AAGGTGTCGAAAGCATTCC

EST sequence (targeted fragment marked with yellow):
AAAACATGTCCTTACGAAAGCTGTGGAAGTGATTAAGCTTTATTTTCATTATTGTGCTTTGCTTTCTTTGTTACGGGCAAAAATGGATGGAACATGTAAAACTAGACTTATACAATGACATTATAATACCATGCGCCTGTTTTCTTTGACAAAAGCCTGTCCGAAATTTTTAGGTGAAGGACTTAGATTTTTATGAAAAAAGTTTGGTTCGGGTTT



gi|164277460|gb|EV488972.1|EV488972 152C05 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||| ||||||
AAGGAGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
GGCTTATATATCATTTTTGCTTCACAGATTGTACTGAAAAACACCATCTTTCTTGTGAATTCTGCAACTTTTGGAGTAACTTAAAGAAGAAATGGGGGAAAAGAGTTTAATTGCCAAGGATGTCACCGAATTGATCGGTAACACGCCACTGGTATATCTCAACAATGTTGTAGATGGATGTGTGGCTAAAATTGCTGCCAAGTTGGAGGCAATGGAACCCTGCTCCAGTGTCAAGGACAGGATTGGATATAGTATGATTGCAGATGCAGAGGAGAAGGGTCTCATTGTACCAGGCGAGAGTGTGCTGATCGAGCCAACTAGTGGTAATACCGGAATAGGGTTGGCATTCATGGCAGCTGCTAAGGGTTACAGACTCATAATTACAATGCCTTCTTCAATGAGTTTAGAAAGAAGAATGGTCCTCCGAGCTTATGGAGCTGAGCTAGTTCTTACGGATCCAGCCCGGGGCATGAAGGGGGCTGTTCAAAAAGCTGAGGAAATTATGTCAAAG



gi|109868010|gb|DW496986.1|DW496986 GH_TMIRS_011_H01_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
||| |||||||.|.|.||
AAGTTGTCGAAGGGATTTT

EST sequence (targeted fragment marked with yellow):
ACGTCAACAAGGGACACTGCATTGCCGGCAAATGATCTCCCTGAGGTGACACCCGAAACGAAGAAGAAAGCTGCAGAAGCCAAATCAAGAGGAGACGAGGCTTTCAAAAGAAAAGATTTTCATATGGCTGTAGATGCATATACACAAGCAATTGATTTAGATCCAACGGATGCTGCACTGCATTCAAATAGAAGCCTTTGCTGGATTCGTCTCGGACAAGCTGAGCATGCTTTAGCAGATGCAAGGGCTTGCAGAGCATTAAGACCAGACTGGCCAAAAGCTTGCTATAGAGAAGGTGCTGCATTGCGTTTGTTGCAGAAATATGATGAAGCAGCTAATGCCTTTTACGAGGGTGTGCAGCTTGACCCCGAAAATAAAGAGCTCGTAAATGCTTTTAGGGAAGCTGTTGAAGCGGGGAGGAAGTTTCATGGTAACGATCAAGAAAAATCTAGTTAGTTTTCTGAGCTGGTACACCAAAGGTTTGAGAAGATATGATGGGTAACAAACCGTGCGGATTTTGAAGTTGGGAAGGGAATGTTTATTTGTAGCATGCTTTATCTGCGAAACAACACAACTGAAAGTTAATGAGCATGAGAATGTAAGATTAGG



gi|84173097|gb|DR461745.1|DR461745 CM100F08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| |||||||.. |||
GAGGTTTCGAAAGGGGTTG

EST sequence (targeted fragment marked with yellow):
CGGACGAGTCAAAAACCTCACCACAAAAGAAATCTCTTCTATTTTTCCCCACTCTACTGCAAAAATGTTTCGATCCGTTGCTAGATCGGCTGCGGTAAGACCTCCTCCGACGAGGATATGAACCGCCGTACCTGAACGGAAAGTCGCTGTCTTGGGCGCAGCTGGAGGGATCGGCCAACCCTTGGCTCTCCTCATGAAGCTTAACCCTCTTGTTTCTCAACTGGCTCTCTATGATATCGCTAACACTCCCGGTGTTGCCGCTGATGTCAGCCACATCAACTCTAGATCTGAGGTTGCCGGATATGTAGGTGAAGAGCAGTTGGGGAAAGCTTTGGAGTGATGTGATTTTGTCATCATTCCAGCCGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCACCATTATTGCCGGAATCGTCAAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCCAATGCACTTGTCAATATGATCAGCAACCCTGTCAATTCAATTGTTCCTATCGCAGCTGATGTTTCAAGAAGGCAGGGACATATGATGCAAGAAGTTGTTTGGTGTACACACCTTGATGTGGTTCGGGCTAAGACTTCCTATGCTGGGAAAGGCTAAGTAAATGTTGCAGATTGTTATTGTCCTTGTTGTTGGAGGCCATGCTGGAATTACCATTCTCCCATATTTTCTAAGCCACACCAAAGCCATTTACTTGAAAAGAATCAAGCTCTCACAAAAGGAACAACAGTGGGACTGAATTTTGAAAC



gi|84169125|gb|DR457773.1|DR457773 CM058G07 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||| ||||||. |
AAGGTGTCAAAAGAATGTT

EST sequence (targeted fragment marked with yellow):
CTTTTCTTTATATAATAAATAAATAAAAATCTCAGTATATTTTGAAAGTTATATATATTTTAATATTTATTTATTAAAAAATAATGGAGAAATTTGTAAGAAAACTGTGGAAGACAGGTTTCAACTCCGACAACCTCATGTTTTGCTAAATATTCTGATTTCCACATTGGAACATTCGTCTCTTTCTTTCTTTATTTTTTTCCTTATATTTCTTCTTGGGTGTAACATTTCCTTCCTCTTTTAGCTAATATCTACCCTTTTTTGGATTGACACAATATCATAAAGGAGTTAATCATATCAAAAAAGTTTAGCTTAATTGCCTATTGAATATACAGTTGAAAAGTTGTATGAAATTGAAACAGCTTGTTAAAATTGTGTGATGGTAATTGTGCTATCCGGAGAAGAAGCTGTATGATGGCAACAGCTGCTATTATCGGACTTACTGTCGGAAAGCGACTCTTGAGTTCTTCGTTTTCGTATTCCGATATCATTGAGAAGCACTCGTATGCTGGTGATTATGGCGGAGCTCCACATTATCAAACTGATCCCACTAAAAGTCTAATAGTTGCCAAGAAATCATCTAATTGTAGCCCAAGTGTTCCTTCATATGATCGGCGTAATCCGTCGATCAAAGTCCTTAAGAGCTTTTGATTATGTTCCCTTTTTCACTTGCGGACTGGTGTCGGGA



gi|109840091|gb|DW238652.1|DW238652 GH_RTMF_24R_A06_InvR_02Aug04_048_F Root (free) - 3 weeks after planting Gossypium hirsutum c

TTCCACAGCTTTCTTGAAC
|.|||||.|||| ||.|||
AGGGTGTTGAAA-AATTTG

EST sequence (targeted fragment marked with yellow):
ACCGATGCAATGAAGGAATCTCACATGCTGGATTTTCTCTTATCGCTAAATGCACTTCAATACAGACGAATGGATTTCGAAGAATTTTGTGCAGCCGCATTAAGCGTCCATCAGCTCGAAGCGTTTGATCACTGGGAACAACACGCTCGTTGTGCATATGATCTTTTCGAGAAAGATGGAAACCGGGCTATCGTCATCGAGGAACTTGCATCTGAACTTGGTCTCGGACCCTCTATCCCGGTTCATGCCGTTCTTAACGACTGGATAAGGCATACCGATGGGAAATTAAGTTTCCTTGGGTTTGTGAAATTGTTGCGCGGTCCATCCAGCCGTGCCGTTGCAAAGGCACAATAATCATGTTATGTTGTTGATTCAACGAGACAGGGATGCAAACACGGATTCGATCTTTTCCGGGGAGTTTCGGAAGGAAGCTCGATAAATCGAGGTTCAGCTCGGATAATGAAGGCTTTAACTTTTATGTTAAATTCTTTGAGTTTAAAAAGTTGTGGGATACTTTGAAAAGGCAGTGAAAAAGATATATAATTGGCAATGGCAAGCAATCAAAAATGTAGAGAAAAAAAATATATATATATATGGTTAAGCTTTTG



gi|164282467|gb|ES820909.1|ES820909 UFL_403_25 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||.||| |||| |
AAGGTGTTGAACCAACTAG

EST sequence (targeted fragment marked with yellow):
GGCACGAGTCTTGCTCCATGTTGCTTCTTCTTCATAGCTTTAATAAAGTTACTTTATGATTACCTATGGATACCCCTCCGTATTCAGCATATGCTGAATTCACAAGGGATCAAAGGACCTCCTTACAGATTCATCCATGGCAACAACAAGGAAGTTACCAAAATGAAACAAAAAGCTTTAAGTAAATCTGTGGGCTTGACAGATGATTTATTTCCCAAAGTACAGCCACATATTTACACCTGGACCAACAGATATGGGAAGAATTTTGTTTATTGGAACGGTGCTCGAGCTGAATTGGTGATTTCAGAGCCTGAATTAGTCAAAGAGGTTCTGAAAAATAGTGAACAAATTTTTCAGAAAAAGAAACTTTCAGATATTGGTAGGAAGTTCTTGGGGAATGGGCTTATATTCATTGAGGGGGAAAAATGGGCAAAGCATCGAAAGCTGGCCAATCACACTTTCCATGGGGAAAGCCTAAAGAACATGACTCCAGCAATAATTGCTAGTGTTGAAACAATGCTAGAAAAGTGGAAAGGCCAAGAAGGCAAAGAGATTGAAGTGTACCAAGAATTTAGGTTATTAACTTCAGAAGTGATTTCCAGAACAGCATTTGGTAGCAATTACATGGAAGGGGAGAAGATATTTGCCATCTTGAGAAAGTTGACAGTAATTATGAGTCGAAAATCTTTCCAAGACTAAAAATTCTTTTGATCAACCAAGTTGTGGAAAATCTGCTGAATTTGCTAAAGGCTGAAAAAACTTTCAAAA



gi|193217592|gb|EY197795.1|EY197795 BC_008_08 Cotton ovule and fiber 3-5 days post anthesis Gossypium hirsutum cDNA, mRNA sequen

TTCCACAGCTTTCTTGAAC
||||||| |||. | ||||
AAGGTGTAGAAGAACCTTG

EST sequence (targeted fragment marked with yellow):
AAACAGAGGACTCGCGCGCCTGCAGGTCGACACTAGTGGATCCAAAGTTGGGTTTGGTTTCTTTTTCTTACAACTTTTTTTGTATGGTCTGAAATCCAATGGCTGTTTCTCCCAACATACGAATCGGTATCCCACTCCCTTCCACTCCTTATACCTACCACCGTCTTCCTATGTCCACTCTCTCCTACCCTTTCTTCTTCTTCTACTCTTCCCCTCCACGCGCACTCCGTTTCCACTCTCCTCCCACGCGCCATCGCCCCCCCTCTCTCCGCCCCAAGGCCTCCGTCGAAACCCCCGCTGCTTCAGGTAAATTGGTTGAGAATGTGGTCATCATAGGCTCAGGTCCTGCTGGATATACAGCAGCAATATATGCAGCTCGTGCGAATTTGAAGCCTGTAGTGTTCGAGGGATATCAAGTTGGTGGTGTACCTGGTGGCCAGTTGATGACTACCACTGAAGTTGAGAACTTCCCTGGTTTTCCTGATGGAATAACTGGTCCAGATTTGATGGATAGGATGCGACGACAAGCTGAACGTTGGGGAGCTGAATTGTTCCAAGAAGATGTGGAACACATTGATGTTAGAATTAATCCTTTTACAATACAGAGTAGTGAACGTGAGGTTAAGTGTCATAGTGTTATTTTTGCTACTGGAGCTACAGCAAAAAGGTTAAGGTTACCTCGTGAAGATGAATTTTGGAGCAGGGGAATTAGTGCTTGCGCGATTTGTGATGGAGCATCACCATTATTTAAAGGTCAAGTACTTGCTGTGGTTGGAGGAGGTGATACAGCTACTGAGGAAGCAATATATTTAACAAAATATGCTCGTCACGTTCACTTGCTTGTTCGTAGGGACC



gi|78337576|gb|DT557850.1|DT557850 EST1068490 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||||.|||||||.|||
CGGGTGTTGAAAGAATTTG

EST sequence (targeted fragment marked with yellow):
AAGAAGACCAAGCGCACAGCGCCGAAGTCCGACGATGTTTATCTCAAGCTCCTTGTCAAGCTCTACCGTTTCTTGGTCAGGAGGACCAAGAGCAACTTCAATGCTGTCATTCTCAAGAGGCTCTTCATGAGCAAAACCAATCGCCCACCAATCTCCATGCGCCGCCTTGTCAAGTTCATGGAAGGAAAGGAGAAGAACATTGCTGTGATTGTTGGCACAGTCACAGATGACAAGAGGATCCAAGAGGTTCCAGCAATGAAGGTTACTGCCCTGAGGTTCACCGAGACGGCAAGGGCCAGGATTGTCAATGCTGGTGGGGAGTGCCTCACATTTGACCAGCTTGCTCTCCGTGCTCCACTTGGCGAGAACACAGTCCTCTTGAGGGGCCCCAAGAATGCCCGTGAGGCGGTGAGGCACTTCGGCAAGGCTCCTGGAGTGCCGCACAGCCACACCAAGCCATATGTGCGCTCCAAGGGAAGGAAGTTCGAGAAGGCTCGTGGCAGGAGGAACAGCCGTGGGTTCAAGGTTTAAGAAAGTTGTGGGCCATCAGCATAGTAATCACTTCCTACCGAGTAGTAGCACATTTTGTTGCCTTGGCTTGGATTTTGAAAGATATTTAAGGATTTTCGTGCCTTGTCTACTGGTTACTGGTTGAGCAAGAAGACAATGTTCTTTTGCACCTCTTTTTATTGGTCGGCATATTTTGCGCTGTGATTGGAACTGTGTTGTGTTATCTGCTGGATGTACTTACTGCATCACCTAGAAAGGTGGCTTGAGCCATTTGGAA



gi|164269599|gb|EV495690.1|EV495690 sg064H08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||| ||||||
AAGGAGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
GGACGAGCTTTGAATCTTTGGTCTTTGGCTTATCTATCATTTTTGCTTCACAGATTGTTTTGAAAAACACCATCTTTCTTGTGAATTCTGCAACCTTTGGAGTAACTTAAGAAGAAATGGGGGAAAAGAGTTTAATTGCCAAGGATGTCACCGAATTGATCGGTAACACGCCACTGGTATATCTCAACAATGTTGTAGATGGATGTGTGGCTAAAATTGCTGCCAAGTTGGAGGCAATGGAACCCTGCTCCAGTGTCAAGGACAGGATTGGATATAGTATGATTGCAGATGCAGAGGAGAAGGGTCTCATTGTACCAGGCGAGAGTGTGCTGATCGAGCCAACTAGTGGTAATACCGGAATAGGGTTGGCATTCATGGCAGCTGCTAAGGGTTACAGACTCATAATTACGATGCCTTCTTCAATGAGTTTAGAAAGAAGAATGGTCCTCCGAGCTTTTGGAGCTGAGCTGGTTCTTACGGATCCAGCCCGGGGCATGAAGGGGGCTGTTCAAAAAGCTGAGGAAATTATGTCAAAGACTCCTAATTCTTACA



gi|84146345|gb|DN760587.1|DN760587 G.hir-stem 3094 PCR amplified cotton stem cDNA Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||||| ||||
AAGGAGTCGAAAGA-CTTG

EST sequence (targeted fragment marked with yellow):
AATAATCCTCTTTGATTTACAAGAGAACTTTCTTGTAGTCTAGACAAGTAACTTGAGAAGAAATGGAAGACAAGGATTTAATTGCCAAGGATGTCACTCAATTGATCGGCAAAACGCCACTGGTATATCTGAACAAGGTTGTTGAGGGATGTGTTGCTCCGATTGCTGCGAAGTTGGAGGCAATGGAACCCTGCTCGAGTGTCAAGGATAGGATTGGCTATAGTATGATTGCGGATGCGGAGGAGAAGGGTATCATTAAACCGGGTGAGAGTGTCCTAATCGAGCCAACCAGTGGTAATACCGGGATAGGATTGGCATTCATGGCAGCTGCTAAGGGTTACAAACTTGTAATTACGATGCCTTCTTCAATGAGTTTAGAAAGGAGAATGGTCCTCCGAGCTTTTGGAGCTGAACTTGTTCTCACAGATCCGGCTCGCAGCATGAAAGGGGCTGTTCAGAAAGCTGAGGAAATTCATGCAAAGACGCCAAATTCTTTCATTCTTCAGCAATTTGAAAACCCTGCCAACCCAAAGATCCATTACAAGACAACCGGACCAGAGATATGGAAAGGCACAGGCGGGAGGGTAGATATACTTGTCTCAGGTATTGGGACTGGAGGTACAGTAACAGGAGCAGGGAAGTATCTCANAGAGCAGAATCCCAACATTAAGCCCATTGGTGTGGAACCGGTTGAAAGTGCAGTGCTTTCTGGTGGGAAACCCGGTCCGCATAAGATACAAGGACTCGGTGCCGGATTCATTCC



gi|164336430|gb|ES801075.1|ES801075 UFL_604_68 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
| |||||||||.| |.|||
ATGGTGTCGAAGGTATTTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGATTTGCAGAGCTTCCTTCTGCTAATGATGAGACCAAAGGACTTGTTATACATCAGCCTAAATACGAGTCTTATTCTGGAAATGCCTTCTCAACACTGATGACTGCCAATTCCGGGTTGTCTCCTTGGTGTGTCTCACCACCCGGAAATCAATGGTTAGTTCCCGTAATGTCTCCTTCGGAAGGACTTGTGTACAAGCCCTACACATGGCCTATACCTCCAACTGCTGGCTTACTTACACCAGTTTATGGAAGCTGTGGTATTGTGAACTTAGGTGTAAGCGGTCGGGACTTTTCGAACACGGCTAAAAATCTTGCAGCTTCTCACCAACACGATATTGAAATTCTTCGAACTGACCCTCCCATAAGTCAGACCAACTTTCCGCATTATGGCATGCCGGTCATGAATCCATCAGTTACTGGCTCAGCACTTGAGCAGATGAGCCGTGTTATTGCTGTCCAGTCTAAGGCCAACTTCACCATGGCTCAACCGAGTTCATGTAACACGTCTAGCCAACTGAGTCAAGCAATCTCGTATTCTACTCAGAAACTACCTGCACCAAATGAGACCGAAATACAAGGGACTACTGGCAGTAGTTCCTCTGAGAGAACTAAAGTGGATGCACTTCCTCTTTTCCCTACTGAACCACCAACAACGGCAGCTAATTGCGATGCTTGGACTCATCAACAACGAACAAAGGTGATTAAGGTTATACCCCATAACCGCGTATCGGCAACTGAATCCGCAGCTCGTATTTTCCAGTCTATACAAGAAGAAAGGAAACAGTATGATTAGTGTTTTCCTTTTTATCTAATGAGAGTGTTCTTGGTTTTGTGTCTGAATATTTGATGTGTAATATTTATATGTTAATTCATGTACATAATATGCAACATAAGGTGGAAAAGAACCAGTTTTTGTACTATTCTATCCAAAAAAAAAAAAAAAAAAAA



gi|109889986|gb|DW518954.1|DW518954 GH_TMIRS_225_H11_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
||||||.||||| ..|||
TAGGTGTTGAAAGTGTTTG

EST sequence (targeted fragment marked with yellow):
AACGCAATGGAGATTTAAAGCTAATACATGCACCAGAAACACCACAAAAGGCGACGATGGAGACTAAACGGAGACTCCAACCCGAAAACCAAGTCAAAACAACAGAAAACACGCAAGAAAGATCGATAATGAACACGTTAACGATGCTCACGATTACGAAAAAAATATCAAACAAGATCCTCAGAGCTTAGAAAGAGCTGAAGCATTGGAATCATTGTTGGAGATTTGTGCTAGTTTACTTAAACAGCAAAGACTTGAGGAACTTGCAGGGGTTTTAAGACCATTTGGTGAAGAAGCTGTTTCATCAAGAGAAACAGCAATTTGGTTAAGAAAGAGTTTGATGAATGCTAAAAGCAAAATCCCAGTAGATCATAGGAATTGAATTGTAAGTTTTTAACAAAAGAATCCAGCAATAGGTAACTCAATGAAGTTTGTGAAAGTTGTGGATTTAATTCCTATAATTTAATTAATTTTAGTTCATGCACTTTTCG



gi|164364445|gb|ES816560.1|ES816560 UFL_277_11 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||| ||||||
AAGGAGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGTGGAGCTGAGCTGGTTCTTACGGATCCAGCCCGGGGCATGAAGGGGGCTGTTCAAAAAGCTGAGGAAATTATGTCAAAGACTCCTAATTCTTACATTCTTCAGCAATTTGAAAACCCTGCCAACCCAAAGATCCATTATCTGACAACCGGACCAGAGATATGGAAAGGCAGTGGAGGAAAGGTAGATGTCCTTGTCTCTGGTATCGGGACTGGAGGTACTGTAACAGGAGCCGGGAAGTATCTGAAAGAGCAGAATCCTGACATTAAGCTCGTCGGTGTGGAACCAGTTGAGAGTGCAGTGCTTTCTGGAGGGAAACCTGGTCCACATAAGATCCAAGGAATTGGTGCTGGCTTCATCCCTGGGGTTTTAGATGTCAATTTAATCGATGAAGTTGTTCAAATATCAAGTGAAGTAGCTATTGAAACTGCAAAACAACTTGCTCTGAAAGAAGGATTGTTGGTAGGTATATCATCTGGTGCTGCCGCCGCTGCCGCGATTGAGATAGCCAAGAGGCCAGAAAATGCCGGGAAACTCATTGTTGTGGTCTTCCCCAGCTTTGGAGAGCGATACTTGTCTTCCGTGCTGTTCGAGTCCGTGAAACGGGAAGCAGAGAGTATGGTGTTTGAGCCTTGAGATGAAACATGGAGAAGGTAACCTATTGATCAAGCAACATTACCAACTTTCCCCATTGATGGTTCTTGTTTTCTTCTAGGGTTATATAAAAAAAAAAAAAAAAAA



gi|164246086|gb|ES813379.1|ES813379 UFL_213_62 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||||||||||| .| |
AAGGTGTCGAAAGTTTTAG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGTTCGAGCCTTCCTTTTGGCCTCGGGTCACGAGTGATCGGTACTCTTTTTGGTTACAGGCGAGGACACGTTCACTTCGCCTTGCAGAAAGAAGCCGGTTCCCCACCAGCTTTCCTCGTCGAACTGGCGACGCCCATAAGTGGTTTGGTTCGAGAAATGGCGTCCGGGTTGGTCAGGATTGCTCTAGAGTGCGATAAACCCAAAGCAGAAGACAATAATAAAAAGGGTACTACTGTAGTGAGATTGTTAGAAGAGACCACTTGGAGAACTTACTGCAATGGAAAGAAATGTGGGTTTGCTACGAGGAGGGACTGTGGTGACAGAGAATGGAAGATTTTGAAAGCTGTGGAACCAATCTCCACCGGAGCAGGGGTTTTACCGGCCGGGAATGAAGTTGAAGCTGGTCCTGACGGTGGTGAACTTATGTATATGAGGGCTAAATTCGAGAGAATTGTTGGGTCAAGAGATTCAGAAGCTTTCTATATGATGAATCCTGATAGCAATGGAACACCTGAACTTAGTATCTATTTGCTTAGAGTTTGAAAGTTACATTCCCATGGAAGATCTGAGCTTATTTTGCTTTTTTTTAAGGGGTATACATGTGATAATTCGTCTTGCTTTCATTTAGAGCCATGGAAATTGGGGGTTTAATTGTACTAGTGTTTTTTTGTGTTAGTTTAGGTGGGAGGGGTGAAATACATTATAACATGATGATGGTGATGATGGTAGGTGGGGGGTCTTAAAAGCTGTGTATATGTACAGTTTTCTTCTTCAGTCTTTGATCAAGTAAATGAGGCACTGTGCCTAGTGCATGCAATCAAAAAAAAAAAAAAAAA



gi|109868656|gb|DW497632.1|DW497632 GH_TMIRS_018_C06_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
||||||||||||| .| |
AAGGTGTCGAAAGTTTTAG

EST sequence (targeted fragment marked with yellow):
CTGCAATGGAAAGAAATGTGGGTTTGCTACGACGAGGGACTGTGGCGACAGAGAATGGAAGATTTTGAAAGCTGTGGAACCAATCTCCACCGGAGCAGGGGTTTTACCGGCCGGGAATGAAGTTGAAGCTGGTCCTGACGGTGGTGAACTTATGTATATGAGGGCTAAATTCGAGAGAATTGTTGGGTCAAGAGATTCAGAAGCTTTCTATATGATGAATCCTGATAGCAATGGAACACCTGAACTTAGTATCTATTTGCTTAGAGTTTGAAAGTTACATTCCCATGGAAGATCTGAGCTTATTTTGCTTTTTTTTAAGGGGTATACATGTGATAATTCGTCTTGCTTTCATTTAGAGCCATGGAAATTGGGGGTTTAATTGTACCAGTGTTTTTTTGTGTTAGTTTAGGTGGGAGGGGTGAAATACATTATAACATGATGATGGTGATGATGGTAGGTGGGGGGTCTTAAAAGCTGTGTATATGTACAGTTTTCTTCTTCAGTCTTTGATCAAGTAAATGAGGCACTGTGCCTAGTGCATGCAATCAGTGACTATCTTTTCCCATTTCGATAAGTAATAGGGCCATTCCACACTTATATAGATACCATCATTTAATTATAAAAAAAATGTG



gi|84145358|gb|DN759600.1|DN759600 G.hir-stem 2104 PCR amplified cotton stem cDNA Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||| |||||.||| | |
AAGGTATCGAAGGAAGTGG

EST sequence (targeted fragment marked with yellow):
TACTGAGCATGCTTTTGATAGTGCAAAGAGTCAATTCTGGGTTGTTGATGCTAATGGTCTCATAACTGACGAACGTGAAAATATTGATCCAGACGCCCTGCCATTTGCAAGGAACACTAATGAAGCTGGTCGTCAAGGATTAAGGGAGGGTTCAAGTCTTGTGGAAGTGGTGCGGCAAGTGCGGCCTGATGTGCTTCTTGGGTTGTCTGGTGTTGGAGGATTGTTCTCCAAAGAGGTGTTGGAGGCTCTTAAAGGATCGACATCAGCTAAACCAGCTATCTTTGCAATGTCAAACCCTACAAAAAATGCTGAGTGCACCCCAGAGGAAGCTTTCTCGATTGTAGGCGACAACATTATATTTGCAAGTGGAAGTCCATTTAGAGATGTTGATCTTGGAAATCGTCAAATTGGGCATAGCAACCAAGGAAACAACATGTATCTCTTTCCAGGTATTGGCCTTGGAACTCTTCTGTCTGGTTCTAGGATCATATCGGATGGCATGCTACAGGCTGCAGCAGAACGTCTGGCTGCCTACATGACAGAAGATGAAGTTCTCAAGGGCATGATATTCCCTCCAATATCAAAGATAAGAGATATAACAAAGGAGGTAGCACCAGCTGTGGTGAAGGAAGCTATGGAAGAGGATCTGCCAGAAGGATATCGTGACA



gi|164330663|gb|ES840539.1|ES840539 UFL_066_24 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| |||||||||.|||
AAGGGGTCGAAAGAGCTTA

EST sequence (targeted fragment marked with yellow):
ATTCTTGTCTTTCTTTTTCTCTTCCTTGCAGTTTTCCCCTGAATACCGAACAACACAAAAAGACTTACCAGATGGGCAAGGCAGAAAACAACCATAACATGGAGGAGGGAACGCTAGAGATCCGCATGGAATATAGAACTGTTTCCCGAGTGGCTGGGCCATTGGTAATCCTTGATAAAGTGAAGGGACCCAAGTATCCAGAAATTGTTAATATTCCTTTAGGGGATGGAACCACCAGACGTGGTCCAGTCCTAGAAGTTGATGGAGAATAGGCTGTTGTTCAGGTATTTGAAGGAACATCTGGAATTGACAACAAATATACGACCGTGCAATTTACAGGAGAGGTTTTGAAAACTCCTGTTTCTTTGGATATGCTTGGGCGCATTTTCGGGGGGGGGGGGAGGCCATCCATAACGGGCCACCTATCTTGCCTGAAGCATATTTGGATATTTCTGGGAGTTCTATTAATCCTAGTGAGAGAACCTATCCTGAACAAATGATACAGACCGGGGATTTCAACCATTGATGTTATGAATTCCATTGCTAGAGGGCAAAAGATCCCTCTCTTTTCTGCTGCTGGTCCTCCCCACTATGAAAATTGCTGCCCCAGATTTGTCCCTCCGGCTGTTTTGGTGAAAACCATTCGAGAAAGCTGGGGAATCTTCTTGAGGATGGTGAAAAACATAATTTTCGCCATTGTGTTGCCGCCATGGGTGTAACGTGGAAACTGCCCAGTTTTTCCAACCGTATTCTGAGGAAAATGGGCCCAGTGGAAAGAGTGACCCTTTTCCTAAACCTGGCTACTACCCCCCCCATTGAGCGTATTATTCCCCCTCCGATTGCTCTCCCCACCGGTTAAAAACCCCGCACTATCACTGGCCGCAAACCCTTGTCCTCTAAATTCCTACGGAGCTGAACGTCCTTATCGCCGACGCCCCTCCCGAGAGGTTTCCCGCCTCCCCCAAA



gi|109858548|gb|DW487527.1|DW487527 GH_RMIRS_064_D05_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTCCACAGCTTTCTTGAAC
|.|||||.|||||||.| |
AGGGTGTTGAAAGAATTGG

EST sequence (targeted fragment marked with yellow):
ATCAGGCAGAGGACGAGACAAAAGTATGGTTAAGAGAAGTTAAAACCAACAGCTTATGGTCTTTTGCACTTACATGGTCAGTATTCAATTACATAGAACTTGCACTAATCCCACGATTCGCACGCTAAATTAATATTAAGAAGGAAAAAGGAAAAACAGAAAGGTAAAGAAGAAGAAGAGAAATTTTGCAGTACTGTTATGGTTTGTGTGTGTTTACAATAGAAAAGGTTATATATGAGGTAAAATTAGCAAAAACAAAATCAAAGTTCTAGTAATCTTGAGCATAGAAGTCAATAATATCGTGGAGATCAAGTTGAGACAAAGAAGAAGAATCATTGTTCATCAACCACAGCATGTGCTCAAACAAGATAGCATCCACGTCCACGAATATCACCTTCTTTTTCTTCTCCCTTGTTGCATGGCTGCCATTCCCTTTCTTCAATGTTTCCATCAAAACCCGGAACGGACTCTCCTCTAACACCAAAGGGTCCACCCAAAATTCTCGTTTCTCTTTCCCTACCACCACCCTCACTTGTGGCTCCAACTCGCGCGTTAGACGCCGGTAGCCTAGCCGTGATCCCATGCTGCGCTTTCCCAATAAGCAAACAGGCAATACCAAGCAATCCATGAGTTATGGGTAGGGAAATGAAGTAATTTATATGGATGTGAAAAAGTGGGTGTTTTTGGGTTAAGAAAGTTGTGGGACTTGAGAGTGAAAGTGAAGGAGGAAAAATTGTGATTGACAAGCTTTTGTTGGGATTGAATGGGCCCAGCAACGGCTAGT



gi|164275823|gb|ES826931.1|ES826931 UFL_359_31 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||| ||||.| | |
AAGGTGTCCAAAGGAGTAG

EST sequence (targeted fragment marked with yellow):
AGCGTGCTCTAGTAATTCCCTTTCTCAGTGGCGACATGATGTTGACGAGGAGGTGCTTCCTGCAATGGCTGAGGAGCTGGGAGTGTTTATTCTCTATGTCGGGGGTGTTGACACATGCCCATGTTTTGCTGACTCCTTTGGAAACCCTTTGCACTGATGAGGAAACCTGTGGAAGGGACAAATGCTGTTGAATCATTATGCAAAATTGGATCTCAGATGAGGGAGAATGATTTGATTGACTGGTTCACTCCTTTATTTAAGAGGCTGGCTGCTGGATAATGGTTTACAGCTCCAGTTTCATCCTGTGGGCTGTTTCACATTGCTTATCCAAGTGCCCCTGAGACGTTAAAAACAGAATTACAGTCTATATACGGCCAACTATGTCAAGATGACATGCCCATGGTAAAAAGGTCTGCTGCGTCAAATCTGTGCAATTTTGCTGGAACAGTTCAATCCTGCTCACTTGACTGCTGACATCATGCACTTGTTTGAGGATCTTACACATGATGATCATCAAACACTCCACTTATTGGCTGTTGACGGATGTGCTGCTCATTGAATTCGTTAGAGCCCACGATTGTGCTGCACGCTTTTCTCCCTGTATTTGTACCCCCCCCAAGAATAATCTTGCCGATTGGCTCTCTTGGTTGCCCAAGCTACTACCCCAATTTTGTTAAACCTTTGGGAACCGACCCCAATTTGCACCTGATTTGTTTCCTGCATATGTGCCGTTTTTTTTTTGGACAATGGAGCCTGAAATTCCCCTTGACACCCTGACGGAAAAAGAAACTTCATTTTCGCCCATTTTTTGATCCCCAAACTTCACGTTCTCCCCCTTTTCCCTCCTTGGGGTCTAAGGAATTCTTTCTTGGATTTCTTCCCCACAAATTGCCCCCTTTTTCTTTTTGCCTATTAGTCGGGGATGGGGAAATCGACTTCCGTCCCTCTCGTTATCGCAGCCCCCATCCCCAACTTTTTTTCCCCCCATTTTTTCCCCCCTCTTT



gi|193217669|gb|EY197617.1|EY197617 BC_006_14 Cotton ovule and fiber 3-5 days post anthesis Gossypium hirsutum cDNA, mRNA sequen

TTCCACAGCTTTCTTGAAC
|||||||| ||| |||||
AAGGTGTCCAAATAACTTT

EST sequence (targeted fragment marked with yellow):
AAACCGGGGACTCGCGCGCCTGCAGGTCGNACACTAGTGGATCCAAAGAATTCGGCACGAGATTCTGTGAGAGTGTTCATTCATGGCTATCAGATGACCCTAAAAACATTGCAGTTGTTCATTGCATGGCAGGAAAAGGTCGAACAGGCTTAATGGTGTGTGCCTACCTTGTTTACACCGGAATGTCAGCTGAGGAAGCACTTCAGTTATATGCCCAAAAGCGGACAACTAACAATGAAGGAGTCTCTATACCAAGCCAACGCCGTTATGTGGGGTATTGGGAAAAATTACTTTCTTTTACCAGAGGCATTGGCAATGGACCTGTCGATGTGCACTTGCCTCAACCATGTAGCCGAGAATTGCGGCGGATACGACTTTACGACACAGTTAATACCAACTCTGTCTTCTTCGTTGTCTCGGAGCTCCAAGAGATTCCGGATCAGATGAACCGCCCGCCTGTTGAAGTTGCCAAGAGATGCTGTCGACAAATCAAAAAAGGAAGTGAAGCGAATTGCAGTCCTCGATATTTCTTGTCATATGTTGAAGGGGACGAAGAAGGGGCTACACCAGAATCGGAAGAACCTCGTGTTGTAGTCCAAATGGACACGGAGAGTCCCATATTATATCAGAAGAACTGTCTTGACTATCGTTTCAATAAACCTGTGGAAGTTAAGGGAGACGTGCGCGTCATATTCTATCAAAAAATGATCGGAGGTCGCCTTTTTTTTGCCTGTTTCAATACAGCCTTCATCAAGAGCAGCTTGCTACAGTTTACGATCCGGGATCTGGACAAAGTTGGGAGTGCCGGCAGATTAATATGCGGCCCTGCATTCTGTGTCGAGTTGCTTTTCGGTCCCAATCGGAGCCTCTCGAGTGCTTTTTCATCTAATTATGATGTAATGAATTTGTACTGAACCCTAAACTCAAAGGACTTGTTTTAAAAAATAATAAAAACAATA



gi|78338922|gb|DT559196.1|DT559196 EST1069836 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||| .|||
TAGGTGTCGAAAGTTTTTG

EST sequence (targeted fragment marked with yellow):
GTTTCCCCTCCTCGCCCGCCCTTTCGTTCTCGTTCTCTCCCAAGACGACCTCAAGGATGTCCAAAACGACGATGCTTCCCCTCTCGATTCCGATTCTTCTTGGGACGACGATGACTTCGGCGGTACTCATGTTAAGCCTGATGACGAGCTCGATCCTGGATCTTGGCGCCGTCTCTTCGAGCCACCTACTACCCTTCTCTCCCCTTCTCATGATACTTCCCTCGATTCTTACTACGCCGCCGTCCAAAAAATCATCTCCGCTTCCAACAACGGAGACGCCAGGTTGATGGAGGAAGCCGCGGCTGAGATCGAGACCGCTGCTAATGCGGACGGTGATCCGCACGCTCGTTCGGTGTTAGGTTTTTTGTACGGGATGGGGATGATGCGTGAGAGAAACAAAGCTAAAGCATTTTTGAATCATTATTTCGCTGCCGAAGGTGGTAATGCCCAGTCCAAGATGGCTTTGGCTTACACTTACTCGCGTCAAGATATGCATGAAAAAGCTGTTAAATTATATGCTGAACTGGCAGAAACAGCGGTAAACAGTTTCTTGATATCCAAAGATTCGCCGGTAATAGAACCGATTAGGATACACAATGGAGCTGAGGAGAACAAGGAAGCTTTGAAGAAATCAAGAGGTGAAGACGATGAAGATTTTCAGATATTGGAATATCAAGCACAGAAAGGGAATGCCGGTGCTATGTACAAAATGGGTCTTTTTTACTATTTCGGATTGAGAGGGTTGCGCCGTGATCATTCCAAGGCTTTGATGTGGTTTTTGAAAGCTGTGGATAAAGGGGAGCCTAGGTCTCTT



gi|164292069|gb|ES833448.1|ES833448 UFL_354_74 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||| ||||||.|| |
CAGGTGTAGAAAGAGCTGG

EST sequence (targeted fragment marked with yellow):
GGCACGAGAGAATGTCGAAAACGCTGGTGCAACCGATAGGGCAAAAGCGGCTGACGAATGTGGCCGTCGTGCGTTTGAAGAAACACGGCATGCGATTTGAAATCGCTTGCTACAAAAACAAAGTCCTCTCATGGCGTTCCCGGGTCGAGAAAGATGTGGACGAGGTTCTACAGTCCCATACGGTTTACTCCAATGTTTCGAAAGGGGTTCTTGCTAAGACCAAAGATTTGGTTGCTGCTTTTGGGACTGATGATCAGACTAAAATTTGTTTGGAGATTTTGGAGAAAGGGGAGCTACAAGTTGCTGGGAAGGAAAGGGAATCGCAATTTTCGAGTCAGTTTCGGGATATAGCGACGATTGTCATGCAAAAAACCATCAATCCTGAAACTGATCGCCCTTACACCATTAGTATGATTGAGAGACTAATGCATGAAATTCATTTCGCTGTTGATCCCAATAGTAGTTCCAAAAAGCAGGCTCTAGAGGTTATTCGTCAGCTTCAGAATAACTTCCCCATAAAACGGTCGCCCATGAGATTACGACTCATAGTTCCTGGACAGAACTTTCATTCTCTTTGTGAGAAGCTGAATGAATGGGGTGCTACCATTGTTTCAAAAGATGAATCCGGAACTCAGCTGTCAGTAATTTGTGAAATAGAACCAGGGCTTTTCCGAGAATGTGACTCCCTTGTGAGGAATTTACAGGGTAGATTGGAAATACTTTCAGTGTCTGTACATGCCGAGGGGGATACGCAAGTGGATAATTACGATGATGAGGATATATCATCACAGCTGCCCAAGGATTCGGCCAAGTCAGCATCATCACGTTTACCCCCAGAATCTTCTGATTCAGTTATCCAACTAAGTGAAAAAATACAAAAGCATACCATTCTATTCAGGAAAGGGGAATGCTGAAGGGGAAGGCAAGCAACATAAGTGCAGCACATGGCATGGATTTGGGGGGGATTCCAAACGTACAGGGATCATTTTAAAAGTGAGTGGGAACAACCAAAATTAAAAAAGGAAAAAACAGGCAACTTTCCTCCCCTTTATGCCAAAAAAATGGTTAACCTGAAGGTGGAAATGAAGTGACTCCAAAAATCCGATTTTTCCGGGAATATATTCTTTTTGGATTTTGGGGGCATAAAAAAACTAAAGGGATTAGGGGGAAAATAACCAATTTTTT



gi|164364428|gb|ES815838.1|ES815838 UFL_260_82 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||||||.|
AAGGTGTCGAAAGAATTCC

EST sequence (targeted fragment marked with yellow):
GGCACGAGTCGAATGGAATCTGGAAGTGGCAATGGTGACAGTGAGGTGCAGAGGACCATGTTGGAGCTTCTCAACCAGCTGGATGGATTTGAAGCATCCAACAAGATCAAGGTTCTGATGGCTACAAATCGGATTGATATCTTGGATCAAGCTCTTCTTAGGCCAGGCCGAATTGACAGGAAGATTGAATTTCCAAACCCGAACGAGGAGTCTCGTCAGGACATCTTAAAAATACATTCTAGAAGAATGAATTTGATGCGGGGGATTGACCTAAAGAAGATTGCTGAGAAGATGAACGGTGCTTCTGGTGCGGAGCTTAAGGCGGTTTGCACAGAAGCAGGGATGTTTGCTTTGAGGGAAAGGAGAGTCCACGTAACACAGGAAGATTTTGAGATGGCAGTAGCGAAGGTGATGAAGAAGGAGACCGAGAAAAACATGTCCTTAAGAAAGCTGTGGAAGTGATTAAGCTTTATTTTCATTATTGTGCTTTGCTTTCTTTGTTACGGGCAAAAAATGGATGGAACGTGTAAAACTAGACTTATACAGTGACATTATAATACCGTACGCCTGTTTTCTTTGACAAAAGCCTGTCCTACAAAATTTGCAGGTAAAGGACTTAGATTTTTATGAAAAAAAAAAAAAAAAAA



gi|54120656|gb|CO496165.1|CO496165 G.h.fbr-sw05555 G.h.fbr-sw Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||.|||.|...||
AAGGTGTTGAAGGGGTTTT

EST sequence (targeted fragment marked with yellow):
GAGCGGCCGCCCGGGCAGGTACAGTTTATCTCATTGTCCCTTCAAAACTAGATTAAAATAAACACCCAAATCTTGTTTTTCTTATGTTTTCTTCATTATTTGCTCTAAACTAATTCTGGGTGTTGGATCCTTCCACTCATTTCGCGTTAAAGTTGCTCCCTTTTCATGCGCTGGGTTTTTTAGGAATCCTGGATTGTTGGCCGATTCATAGTCGATCCGTAATTGGTTTTACGTTTTCCGATTGAATCCAACATTGGGTCGTTTTATATTGATATAAACAACGAAGCTTTGCTTGATTCCTGACAAGAATGGAAATGGAGCTTGGCAAGCTATTCATCGGTGGGATTTCTTGGGGCACAAATGAGGACCGTCTTAGAGAGTATTTTCAAACTTTTGGGGAAGTTGTGGAAGCTGTGATAATGAAGGATCGGGCTACCGGCCGTGCCCGTGGATTCGGGTTTGTCGTTTTTGCTGATCCGGCTGTTGCAGAAAGGGTTGTGATGAAAGAGCATATGATAGACGGTAGAACTGTTGAGGCAAAGAAGGCAGTTCCTAGGGATGACCAGAACATGTTGAACAAAAATAATATTAGCACACTTGGATCACCTGGTCCTTCTCGCACAAAAAAGATATTTGTAGGAGGCTTGGCATCCACAGTCACTGAGAGTGACTTTAAGAGGTACCTCGGCCGCGACCACGCTAAGC



gi|109876289|gb|DW505263.1|DW505263 GH_TMIRS_092_D02_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
||| |||||||.||..| |
AAGTTGTCGAAGGAGTTGG

EST sequence (targeted fragment marked with yellow):
AGCTCATGGAAAAGGTCAAGCATTACAATTTAACTGGTTATTGGAAAAGGAAGCCTTTGTTTTCCATCCCAATGAGACATTTTCTGTCAACTTTGACAAGGTTGAGGAAGCTGTTGAAAGTTTGAGTAGGACTATACTTACCATACAAGCTAAGGGTGACAAAGAAGGTGCTAGTTTGCTTCTGCAGAAATACTGCACAATGAAAAAGCCATTGAAAGTTGCATTGCAAAAGTTGGAATCCATTCATGTGCCTGTTGATATAGCTCCCATATTTCCAGTAGCCAAAAGTTTGTTGGAATGAAGGTTGCTATTATATGGTTTGGACAAATAGCCATGCTGCTTATGATTAAATTTACAAACACAAAATAATGCTTTTTAGCAATAGCAACTTTGATACTACATGCAATCGAAGTCTTAGTATTGGGCAAATCATCCCTTCCATGCAAGCATAGTTTCGTATCATTTGTTTTGCTTGTGTTGCTGTAAGTTTGATGAAGTTGCTAAATTCACGTTATGTGATTGAATGAGCGGGTTGGATGTTCTCGTTTTTTATAACATATGAATTCGAAGATTGTACTAAATAACATTGTTTGTTGGTTAAATATTAGAATCTATTATGTCAAAATATGCATTAGAAAATAAAATTTTAAATAAAAAATGTATGATAGATTT



gi|164312662|gb|ES841014.1|ES841014 UFL_072_47 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||| |||||| ..|||
AAGGTGACGAAAGTGTTTG

EST sequence (targeted fragment marked with yellow):
CCAAAGCGGTAGCTCAGCCGCCCAAGCTGAGAGCTTGAACTCTGGTGTCAAAAAGGAGAGTAAAGCTGTTGCCGCTACCGATAAGCTTAAAGCCTCAAATTTTCCAGCTTCCATTCTTCGAATCGGCCACTGGGAGTATAAGTCGAGGTATGAAGGTGATTTAGTGGCCAAGTGTTATTTTGCAAAGCATAAGCTTGTCTGGGAGGTGTTGGAAGGTGGGCTTAAGAGTAAGATTGAAATACAGTGGTCGGATATTATGGGTCTGAAGGCAAATTGTCCTGATAATGGACCCGGGACTTTGAATGTTGTGCTGGCTAGACAGCCCCTTTTCTTCCGGGAGACTAATCCGCAGCCTAGAAAACACACCTTATGGCAGACAACTTCAGATTTTACGGATGGTCAAGCTAGCATACATAGGCAACATTTTCTGCAGTGTCCCCAAGGGTTGTTAAACAAGCATTTTGAAAAACTGGTCCAATGTGATATGCGTTTGAACTGTTTAAGCAGACAGCCAGAGATAATTTTGGATTCACCGTACTTTGAATCACGGAGTTCTGTTTTTGAGGATCCCAGTGAACCTAAAGGGCATGACTATGGCCAAGGGGAGACTGGTAAAGGATCTACTAGCTCTGGCTTCCAGAATATAGCATCACCTGTTGCAGCTCACTCCTCGTCTTTGGAGATTGAGAAAGGGGATTCTGCTGTCATAACCTCGGAAAATATGTCTAGGGAAGCTCCGTCTCCCAGTTCAGGAAAGCGGAGTTTGTGAAAGCAGTGGAATTCAAAGGGGCCTAGAAATTGGGACCAGATAAAAGTGCCGGGAATTCACCCTCCTATGGCCTTGAGGGATCTTATGAACCCAATTGGGAAACCGTTTTTCAGAAACACATGACCTTCCGAAAATCCTTCCTCTGGAAAAAAAAACAAAAATGGCCGGGAAAGGCTGGGAGGAAATTGCACAAATACCCTTCGGAATGAAACCTCAATT



gi|164258411|gb|ES811894.1|ES811894 UFL_253_81 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| ||||||||| |||
GAGGTATCGAAAGAA-TTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGCTCAAGTTAAGAAAGCTATGGAGGTGACACATTATCTNTGGGGGAGAAAATTATGTATTTTGGGGTGGTCGTGAGGGATACCAAACACTCTTGAACACAGACATGGAAAGAGAGCTTGATCATATGGCAAAATTTCTTGAAGCTGCTGCTGCCTACAAGAAGAAGATTGGATTCAATGGAACTCTACTGATTGAACCTAAGCCTCAAGAACCTACCAAACATCAGTATGACTGGGATGCTGCAACAACACTTAACTTCTTGCATAAATATGGGCTGCTTGGAGAATTCAAACTTAACATTGAGTGTAACCATGCCACACTCTCTGGTCACAGCTGCCATCATGATCTTGAGACTGCAAGAATCAATGGAATGTTAGGAAATATTGATGCAAACACTGGGGATCCTCAAGTTGGTTGGGACACAGATCAGTTCTTGACTGATGTCGGGGAGGCAACCATGATTATGCTAAGTGTGATAAGAAATGGAGGATTAGCACCAGGAGGCTTCAACTTCGATGCAAAATTACGGAGAGAGAGTACAGATGTTGAGGACTTGTTCATTGCTCATATTAGTGGAATGGACACCTTGGCTCGTGGACTCCGAAATGCTGCTAAACTGATTGAGGATGGTTCTTTGGCTGAGCTTGTTCGTAAACGATATTCTAGCTTTGACACAGAACTTGGTGCCCAGATTGAGGCTGGTAAAGCTGATTTTGAAATGCTTGAGAAGAAAGCCATGGAATGGGGAGAGCCCAAAGTTGCTTCAGCCAAGCAGGAACTTGCAGAGATGATTTTCCAATCTGCACTGTAGGATACCTTGATTGACCGATTATGGTCAATGTTTTCGGTTTTTCCTTTTAGTTAGGAATAAGCCATGATGCTTATACCAATAATTAGATTTATGTAGTTTATAACAATGCATTAGTGCTTAGTTTTTTAGAAAAATGGTATGTTTTAGTAGTTGAACTCTTGGGTGGTATGCCACCTGACCATGAAGGGAATCCATGCCCTTTTTAGGTACCCTTCCTTGGAATGTTGTGGATAGTTGATGGCCAAGTTTGGCTTTTAAAAAAAAGAAAATTTAATAAAAAAAAAAAAA



gi|109854398|gb|DW483377.1|DW483377 GH_RMIRS_041_E04_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTCCACAGCTTTCTTGAAC
.|||| ||||||||| |||
GAGGTATCGAAAGAA-TTG

EST sequence (targeted fragment marked with yellow):
AATGTAGCTATAAATACAGAGTCATCATCCTCAGGGCTTGTTTCTGCTCTTCTTATCAAAACCCTTTTTTTCTTAATCAAATCTGGTTCAGTTCGCATAATAGTAACGCATAAAAGTATGGTTGAGAGGATTTTATTACTAGTTCTTTTTATGAATGCTGCCTTTTTAATAGTGAATGCTGTACCAGAAACATGCCCTGCTGATCTCGGTGGAAAATGTGGTGAAGATAGTGAATGGGAAGGGGAATTTTTCCCTGGAGTTACTAAAATTAAGTATGAGGGTCCTTCTAGCAAGAATCCACTTTCATACAAATGGTACAATGCAGAAGAAGTGATTCTTGGGAAGAAAATGAAGGACTGGTTGAGATTTAGTGTTGCATTTGGCATACATTTCGTGGAACAGGTGCCGATCCTTTTGGTGCACCCACAAAGTCTTGGCCATGGGAAGATGGTACCAATTCCATTGCTATGGCCAAAAGAAGAATGAGAGCCAACTTCGAATTCCTAAACAAGCTTGGAGTTGATAGGTGGTGTTTCCATGACAGGGACATTGCTCCTGATGGCAAAACACTAAAGGAAACTAATTCAAACTTGGATGAAGTCGTGACACTTGCTAAAGAGCTTCAGGGGGACAAGATCCGTCCACTGTGGGGTACTGCTCAACTATTTATGCATCCTCGTTACATGCATGGTGCTGCTACAAGCTCTGAGTTGGGTGTTTATGCCTATGCTGCTGCTNCAGTTAAGAAAGCTATGGAGGTGACACATTATCTTGGGGAGTTGTCTCGTCCTCTGCCTGATG



gi|5050253|gb|AI731401.1|AI731401 BNLGHi8916 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to CALNEXIN HOMOLOG PRECURS

TTCCACAGCTTTCTTGAAC
.||||| ||||.||||| |
GAGGTGACGAAGGAACTAG

EST sequence (targeted fragment marked with yellow):
CGAGATTTGGACAATGCAAGAAGGTATATTGTTTGACAATATTTTGATAGCCAAAGAAGAGAATGTTGCTAAGTCATACCGGGACACCACATGGAAACCGAAGTTTGTGGTTGAGAAGGAAAAACAGAAGGCGGAGGAAGAAGCTGCAGGTTCGGATGATCTCGGTGGCTTCCAGAAGGTGGTCTTCGATGTCCTATACAAGTTTGCTGATATTCCTTTCTTAAGCAAATATAAGCTCCAAATTCTTGACTTCATTGAGAAGGGTGAGAAACAACCCAACCTCACCATTGGTGTCCTGGTCTCCATTGTGGTGGTTATCTTGACAGCTATCTTCATGCTCATTTTTAGTGGGAAGAAACAACCAAGAGTAGAGAAGAAAACAGAGGTGGCTGCTGATACATCAAATGATCAAGGAAGCAGTGGAGAAAAGCCAGCTGAAGAGGAAAAGGAGAATGAAACTGGTGGTGCTGCTCCCCGCCAAAGGAGGCGTGACACTTGAAAGCTTGGCTTGGCTGGTGATTATCAGTTTCACTTTTGCGCAGTTTTTTTTGTTGTTATTTTTGCGGTTTAGGTGG



gi|164345696|gb|ES823746.1|ES823746 UFL_370_59 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||.||||| ..||
AAGGTGTTGAAAGTGTTTT

EST sequence (targeted fragment marked with yellow):
GGCACGAGCCGAGCCATGGCTCAACGAAAACGCCGACTTTGATAAAGTGTTCTTAGGCGGCGACAGTGCTGGAGCCAACATCGCTCACAACATGATAATGAAATCCGCCCGAGACGACCAAGTCCGACTCAAACTCTCCGGTTTGCTTTTGATGAACCCTTTTTTCATGAACGACGAGCCTGACGAACTTATATCATTCATTTTCCCTTCGAGCAAAGGTCCCAATGACCCGAGGTTGAACCCGGCTTGTATCGCCATTAAAGAGCTGGCTGCTGGTCTGGTCTGCAAAAGGATACTGGTCTGTGTTGCAGAGAAGGATTTTCTGAGAGAAAGGGGTGTGAGTTACTATGAAACGGTGAAGAACAGTGGGTGGAATGGGGTTATAGAAATGGTGGAGATTGAAGGGGAAGAGCATGTTTTTTATTTGTTTAAACCAGATTGTGAGAAAGCTGGTGAGTTGATGGATCGAGTTTCTTCATTTCTGAATCTTTGAAGCTTTGAAACTTGAAATTCCCCAAGGATCAAATTGTAAAATGGTCAACTTTTAGAGCCAGCATTGTTGAAATAAAAACGCCATTAGTAGGATTTCTTCTGTGTGTTTTATTATTGGCTAAATCCTGCTATTAGTCTTTATACTTTTGTGAAAGTTGTGGAATTGGGCCCCATTACTTTAATTTTGAATCAATTTTAGTCCCTTGTACTTTTTAAAATTTTAAAATTTTAATCCCTACAGTTAATTCCTTTTTGAATTAAAAAAAAAAAAAACAAAAAAAAACTCCGAAAGTAATTTCCTAAAACGGGCCGGCGGGGCCCCATTAATTTTCCCCCCCGGGGGGGGGGAACCCAGGAAAGGGGGACCCCATATTCCCCCCCTTATAGTGAGGTCGGAAAAAAAAATTTCACTGGGGCCCCCCGTTTTTAAAAAGGCCGGGGAGGGGGAAAAAACCCCGGGGGGTTAACCCCAAATTAAAAACGCCCTTTGGACAAACAATTCCCC



gi|164292623|gb|ES841769.1|ES841769 UFL_080_70 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| |||||||||| |
GAGGTATCGAAAGAACGAG

EST sequence (targeted fragment marked with yellow):
AGATGGCTGGTTACAGAGCTGAGGATGACTATGACTATCTTTTCAAGGTGGTTTTGATCGGTGATTCCGGTGTCGGAAAGTCAAATCTGCTCTCGAGGTTCACCAGGAACGAGTTTAGCCTCGAGTCCAAGTCCACTATTGGTGTTGAGTTCGCTACACGTAGCTTGAATGTTGATGGAAAGGTCATCAAGGCTCAGATTTGGGACACTGCTGGTCAAGAAAGGTATCGTGCCATAACAAGTGCCTATTATCGAGGAGCTGTTGGTGCACTTCTTGTGTATGATGTTACACGACACTCCACATTCGAAAATGTCGAGAGGTGGTTAAGAGAGTTGAGGGATCACACAGATCCCAACATTGTAGTCATGCTCATTGGTAATAAATCCGATCTTCGTCACCTTGTGGCTGTCTCAACCGAAGATGGGAAATCCTTCGCGGAGAAAGAATCCCTCTACTTCATGGAAACTTCTGCCCTGGAAGCTACTAATGTTGAAAATGCATTTGCCGAAGTTCTGACACAGATCTACCATATCGTGAGCAAGAAAGCTATGGAGACCAGCGAGGAAGGGAATGCTTCAGCTGTCCCATCAAAGGGAGAGAAAATCGATGTGGGTAAAGACGTGTCAGCTATGAAGAAGGGAGGTTGCTGCTCAAGCTAGGATGATCACACTAATCTGAAGTCAGATTGTTTAAATGATGCGGCCGGGGTTTCGAATTTCATCATAAACCTTGGGTTTTGTAAAATTTTCTTAAAAGGGTGCCTAAAGTAGATCTGAGCAGAGATTGATTTAATTTTTCCTTCATTTTTTTCCCTGATGACTGTTATTGTTAGTAAACAAGAGGAATACGAAGAACAGGGCCTTACACTATTGCATTTAAATATGTGCTTAAAAACGTCTGTTTACTTAAAAACAAATTGTGCCCCACTTCTTTTGGTGGAAAAAACCATATGCCCATTTGTTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



gi|164298321|gb|ES834372.1|ES834372 UFL_405_31 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.||||||||||||||| |
CGGGTGTCGAAAGAACT-G

EST sequence (targeted fragment marked with yellow):
CCGTTTTTCTTTTCTATCTCTTCTTATCCATTTGTTTTAATTCACCATTCAGTATTCACTACAGATCCGTTACGAACCCAAAATCCATCTCGTACTCTGTTTTTTCTTTCTTCTTTCAATCGTTTCGCATTTTTCTCGTGCTCTTGCAGGTGGTATCATCAACAAGCTTTATCAAGAAGAAACTAAATTATGAGATAGCATCCCCTTCTTTGCTTTTTCTTTTTTTGAGGGGGGGAGGGAGAGGGTTTCATTAATTGATATCAATCCAAGTCCCGTGAATCAGTGAATTGGTTTTCTCTAAACCCAAAACTCACATTCAAAATCTGGGTTTCTCTTTTTTTCCAGAAATTTTAAATTAAATGCGAAGATAATTGCGGAGTTTTTGAGGATCTGGGTATTTTTGAGAATCGACTAACAGAAGGGAAAAAAAAAGAATGTTGGAGCAGGAATTGTGTCCATCTCGGGTACTGTCACCGTTCAGGGAAGAAAGCGGCGACGAAGAGCTATCGGTTTTACCGAGACACACCAAAGTTATTGTCACTGGAAACAATAGAACAAAGTCAGTATTGGTTGGGTTACAAGGCGTAGTCAAGAAAGCTGTGGGCCTTGGTGGTTGGCATTGGCTGGTTTTGAAAATGGCGTTGAAGTCAAGTTGCAAAAAAACGCATTGAGCGTGTTGGAACATCCTACCGGCAACAAAGTAAACGAGGACATGATTTGGATAACTCGAAGCATGGGTCCAAATTGGTAATAACAATCAAGTTCAAAGGCCAAGCAAAACCCAAAGTTGAAATAAAAAAACTTGGGTTCCATCTGGCTCCCATGAAATCAAAAAAATCGAAAAGGGTAAAAAAAAACGCCCAATCATTAATCCTGGGGCAAAAATCGGGAAAATTTGGGAGAATTCAAAACCAACTCCTTAACGAAAAAAATTGGAAAACACTTCAAAATTGGGG



gi|164347907|gb|ES832108.1|ES832108 UFL_460_63 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||.|||||| || |
AAGGTGTTGAAAGACCTGG

EST sequence (targeted fragment marked with yellow):
GGCACGAGCCTTTCCCCCCCCTCAATCGCCTAACTGTCTACATCAATGGCAAAGAAGAAATCACCCGGGTAAGAAGAAGCAAAAGGTAAAGGGATTGAATCAAATTGAAAATGCTCCAAACTTCAGTAAGCTGCCCAGGAAAGCTGAACCTATGCCTTACTCTTTTTCTTCCCATGCTTCCCCATCCGCTTCTGGTTCCTTGCAAGAGTGCTCCTATGATAGAGATGAAGCTTCCAGTGTAACCTTAACTAATTTCGATGATAAACAGGATGGAAATAAAGTGGATGACTCAATTGCTTTCAGTGGCTCATGTGATAAAAGATCAAGATTTGTGTTAAATTTCTATGAATTTCCAGCGGTAGAAGCTGAACCAATTGCTCCAGATACAGTTAGTGATCCATGCAGTGGTAGAGTGGTCCAGAAAGTTGTGGAACAAAAGAGTGATGTGAAGAAGTTACAAGTTAGAGGAAGCACTGGTGTTTGCATAACTCCAGGAAATGCCGTATGGGCCAAAACAGCTTGCCAAGTGTGGTGGCCTGCTCAAATCATTGACAAAAGGTCCGTTTTAGTTGATTCAACAATCCAACAAACCGAGGAACATGTTTTAGTAAAGTTTTATGGAAAACATGACAGTGCTTGTCATTATGCAGCAAGAGATCTTTCAATGCTTGAGGATTGCTTTGAAGAAAGGAGCTGCAATTTTATGGAAAATTTTCAAGATGCTTTGAAACCAGCCATAGTACAGAGGAAGAAACATATAAAATCCTG



gi|73848228|gb|DT457248.1|DT457248 GH_ON34E07.r GH_ON Gossypium hirsutum cDNA clone GH_ON34E07 3', mRNA sequence

TTCCACAGCTTTCTTGAAC
||| |||||||||.| ||
AAGTTGTCGAAAGGAATTT

EST sequence (targeted fragment marked with yellow):
TACGTTGAACACTGCCTGTAGATCACCCTTCAATTTCTGACACATTGCTGCAGAGTCCGATATGCCCTTCCAGATTGCTGCAGCTGCATTTCCCCGAGAAGATGCCTCTCGATAGCATTAAAGCAGTCAACAGTTTCCAATTCGAGCATTTTAGTTATAAGGAGATGTATATCAGTCTTCATTCTTGCCTGCCTCCACAATCTATGTTGTTCATTTTCCGCAATAGAAAGCCGTCTTTGAAACCATGGCAAAAAGTTGGGTCCTTTAAGAAAACGCCTATACAGGTCCAGCCAGTTAGATCTCATTCGCTTCGAGAGAAACTTTCCCACCCCTCTTGCTGATAAGCTCATAAGAAAATCATCAGCATTAAATGGAGGTAATGGAGGGGGGTCAGCGTATGGTGACGAACCTTCAGAAGGAGTAGTAGCCCTAAAATATGGTCCAAAAGGTGCCAAAAAGTTGGTCGTGAGCTCCAAGAAGTGTCGCCGTAATATCTCATTATTAACAACAGACATAGATTCCTCGACCCTTGGTGACATTCCAGCATCAATAAGCCTATTCAAGATAGAAGTGTCGGGCTTTGTAGTTGCAACATAAGTGCTCCAAATTGCCTCCTTATGCTCTGTCATGAGACAGAGAGGGCCATCTCTCCTCAGCTTCACGGCATTAAACAAACTTGAAGGCGAAAACTTCTTTAAGGAAAGCTGTTGAAGACCAAATCCTTCCTGTTTAGCAGGAATTCTTCCAGTGGACCTACTTGCAATGGTAACCCTACTTGAACTCGGTGCAGGGCTTCCAACCGACACAATGTGTGGGATATAACGAAGAGCTTTAAAGAAAAAGAGATTTGTGACACCCAAAACCATAGGTGGATATTTGCGGACGCGTGAGTG



gi|82755321|gb|DV848883.1|DV848883 GH_LSL04C03.f GH_LSL Gossypium hirsutum cDNA clone GH_LSL04C03 5', mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||| |||||. ||
AAGGTGTCTAAAGAGACTG

EST sequence (targeted fragment marked with yellow):
CTGAAGTGGAACCGTCAGAGAAATCTGTGGAAATCATGAGGAAATTCTCAGAACAATATGCACGTCGCTCAGGAACCTATTTCTGTATGGATAAGGGAGTTACTTCTGTTGTAATCAAGGGATTGGCGGAGCATAAAGATTCGTTGGGTGCGCCACTTTGCCCTTGTAGGCATTATGATGACAAAGCTGCCGAAGTCAATCAGGGATTTTGGAATTGTCCATGCGTTCCTATGAGAGAGAGGAAAGAATGTCACTGCATGCTCTTTCTCACTCCGGATAACGACTTTGCTGGCCAAGATCAGACCATAACATTGGAAGAAATCAAGGAAACAACAGCAAACATGTAACACTTGACGGTTTCAAATTTTGTTTCTTAAACAGTCATAACTTGTTTTTTGGCCCTCGAAAAAAGAAAAACAGAACAGAGGTCGAATTTTATATGTATATTTGTATTTCAACAGAGGGATAAATTCTTTTTTTTTTGTTGCACCTCCTATAATATGCTATTATAGTTATTAGCTATTTGTATCAACCTTCTAATTGCTGCCATTGATTTTGGAATTCTTTGGGCTATAAAACTTGTGAG



gi|78331037|gb|DT551311.1|DT551311 EST1061951 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||||||||||| .| |
AAGGTGTCGAAAGTTTTAG

EST sequence (targeted fragment marked with yellow):
CTTAAGCCAGGTATGGCAACATCCTCTCAAGACTCTTCCTCTTCCAAGAGACACTTCCATTGGACTAACAAAGTTGCAACCGAAGATACCGAAGCCTCTTCGACAACACCTAATGAGGATGACAAGAATGGAAGATCAGGTATTAAAACCCATGTTTCTTTGTCCACACCAAGGAAGAAAAAGCTTCCGGCTGCTGCTGTTTCCATCGCAAGGCTCCGATCTGCTGTTTCATCTTTTAGGAAGAGCCGTTCGAGCCTTCCTTTTGGCCTCGGGTCACGAGTGATCGGTACTCTTTTTGGTTACAGGCGAGGACACGTTCACTTCGCCTTGCAGAAAGAAGCCGGTTCCCCACCAGCTTTCCTCGTCGAACTGGCGACGCCCATAAGTGGTTTGGTTCGGGAAATGGCGTCCGGGTTGGTCAGGATTGCTCTAGAGTGCGATAAACCCAAAGCAGAAGACCGTAATAAAAAGGGTACTACTGTAGTGAGATTGTTAGAAGAGTCCACTTGGAGAACTTACTGCAATGGAAAGAAATGTGGGTTTGCTACGAGGAGGGACTGTGGTGACAAAGAATGGAAGATTTTGAAAGCTGTGGAACCAATCTCCACTGGAGCAGGGGTTTTACCGGCCGGGAATGAAGTTGAAGCTGGTCCTGACGGTGGTGAACTTATGTATATGAGGGCTAAGTTCGAGAGAATTGTTGGGTCAAGAGATTCAGAAGCTTTCTATATGATGAATCCTGATAGCAATGGAACACCTGAACTTAGTATCTATTTGCTTAGAGTTTGAAAGTTACATCCCATGGAAGATCTGAGCTTATTTTGCTTTTTTAAGGGTATACATGTGATAATTCGTCTTGCTTTCATTTAGAGCCAT



gi|109850287|gb|DW479266.1|DW479266 GH_RMIRS_018_G08_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTCCACAGCTTTCTTGAAC
|||||||| ||||||.| |
AAGGTGTCAAAAGAATTGG

EST sequence (targeted fragment marked with yellow):
ATCAGGCAGAGGACGAGACAAGAGGGAAATTATTACGGCAAAATTCATAGGTATCAAGCTAGGGTTCTTGGCTGGTTCCAAATTTTACTTAAATTACAGTGCAAACTACATCTTAAAAGATCAGTAAAGCTTGAAAAGGTAACAATAAAGCAAGTATGGAGATGGGTTACGCAGTCAAAATCAAGGGATTTCACTCTTATCAAACCAGAAAATCAATGGCTTCGGCTGCTACTTGTAGAACCCGCAGATGGGGTCGGTTTCTTCAATGAACAAGAAGACTTGAAAGCTTCTATCTGAGATTGACATTTCACGTAATCCCCTTTGTTTTCTTGCAAACACTTCTTTAAAGCCTCAACGTCGCATGGTGATGGGATCTTCTTCGCCCCGTTAATATCTCCGTCCTCGCCCATTTTCTTAAAACCTAATGTTTGGAGGTTAAGAAAACTGTGGAAACACAAGGAGAAGAGACGGCGAAAATT



gi|84172593|gb|DR461241.1|DR461241 CM095C10 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||||||||||| |||
GAGGTGTCGAAAGTTGTTG

EST sequence (targeted fragment marked with yellow):
AACATTGGTCTGAAAAGAAGCTTGAAGAAATGACTGAACGTGACTGGAGGTTTTTTAGGGAAGATTCAACACTTCCCATGAAGGGTCGAAGATCCACGGCCAATGAGGAGTTGGAGTGAGAGTAAATTGAGTTCCGAGTTGTTGAAAGCTGTGGAGAGTGTAGGGTATAAGAAGCCTTCCCCGTTACAGATGGCTGCGATTCTTCTAGGATTGCAGCAAAGGGATGTGATTGGGATCGCCGAGACAGGATTCGGTAAGACTGCTGCTTTTGTTTGGCCAATGCTTTCTTATATTTCTAGATTACCTCCTAGTGAAGAGAATGAAGCTGAGGGGCCATACACTGTTGTTATGGCCCCAACTCGTGAACTTGCTCAACAAATTGAAGATGAAACTATGAAGTTTGCGCATTATTTGGGTATTAAGGTCGTTCCTATTGTTGGTGATCAGTCAATAGAGGAACAACGGTTTAGGATTAGACAAGGGTGTGAGGTTGTTATTGCTATGCCTGGTCGGTTGCTGGATTGTTTAGAGAGGCGGTATGCTG



gi|109833162|gb|DW231727.1|DW231727 GH_OVFIB_01-01-05R_C03_InvR_22Jan04_027_R Ovules - day of anthesis Gossypium hirsutum cDNA,

TTCCACAGCTTTCTTGAAC
| |||||||||||||| |
ACGGTGTCGAAAGAACGTA

EST sequence (targeted fragment marked with yellow):
AAGGTGCCATATCGGTTCAGTTGGGTACAGAACCTGCATCGAGCTGATGCAAGAAAGCTGTGGCATTACATTTGATAACTGAAATAGAAGGCGTCATCTCATTCTAAAGTAGTTATTGATGAGCCATTTTGACATATTTGGTACAAAAGAATTTAATCGCCATTTACCTTAACCACATTCATAGAGTTGCATACAGCATTCTGATCTGCAAACCTATCAAGCTCGGTTTGAATGGTTTTTACGATTTCAGTATCTTCTAGCCCCAGCTTCGGAAACTTTACATGAACTGATCCCTGTCTGATCGGCAAACTAGCCTCTATAAGTGTCGATTGCTGCTTTATGTAATTGTAAAGTTGTTGATGGAAGGTATGGTCTAATGAGAAGCAATTATCTACTGTTCCATTGCTGCTGTTACGTGATGACCCCGACCCCGATCCCGATCCTTCTTTTCGACAAAAATGTGGGAGAGATGAATAATCCATTATTTTGAGTAACTCATCCCTTCCACAACCTTGAAGCACTTGAATTTTCCGCTTCGTCCTTTCTTGCAAAAGAGGTTTTACAGCCTTCCAACATGCCGAAAATATGTATGGCGCATTGACAATATAATACGTCCCTGTCTTCTCAGGATAATTCAAGTCGTCAATGGTAGCTATAGTACTCAATAGCTTTATTTGGTTCAACGCCGAAAGTTCCAAGCCAGTCATATCCAAGATTTTCAAACAAGTGCTAATATGTCGTCCATACTTTTCTGC



gi|109845442|gb|DW244000.1|DW244000 GH_TSnorm_01-01-15R_B10_InvR_25Feb04_078_R Stem (norm) - 3-5 weeks after planting Gossypium

TTCCACAGCTTTCTTGAAC
.||| ||||||.|| ||||
GAGGAGTCGAAGGACCTTG

EST sequence (targeted fragment marked with yellow):
AGAAATGAGGTAGAAATGGCTATTTACCAACCCCATTTTCTTTATCTAATTAATTAATTAGTCTATTAAGAGTTAACCCTTAATTTTTCACCTGCCCTTGCTCATTGTCAATACACAAAATCTATACATACACATATAATTAATTAGATTATTCACTAATAATCACCATAAGTTTTCAATTTCTTCCAATCCTTAATGAAGAATCAACTCCTTTATTTGATCCTGCAAAGAGCCTAGCAATTTCCAATTGAGTGTTGGCAATGATCTCAGTTCTTTTGAGGTCCATTTCTCCTCTTTTAGCCTCAGCTTCAACCCTCATTTTTTCGATTTCTTTCATTGTTTCCATCCTTGCTTGTTCTGATTTTAAAACTACTTGTGCTAGCCATTGAATGCTCCCTCCAATTTCACACTCTTCTTTCCTTCTCTTCTTCTTCTTCATCATCGTTGCCATCGTCTCTATTTTCATCTTTGCTTTCTTCGATCTCGGTCTTTCTCTGTCGCTATAAAGAGCAGGCGTACTACTATCTGTCTCCATAGCTATCTTGTCCGATAAACGACCCGATGACTTTGTACCGGCTCCATCCTCCTTGGGGATCCTATCAATACCATTGGAATCGTGTGAATTTTGTGTAGTTCCAGGAAGCTGAGGAGCCAAATGTGGTGGTGGTG



gi|109880578|gb|DW509548.1|DW509548 GH_TMIRS_135_A06_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
|||| ||||||.|..|||
AAGGAGTCGAAGGGGCTTC

EST sequence (targeted fragment marked with yellow):
CTTCTCCGGCTTCGGGGAAGCTGAGGAAAGAGCCGTCGCTGAGTCAAGACGAGTTGAACCGTCGAGTGGAAGCGTTCATAAAGAAGTTCAATGAGGAAATGAGATTACAAAGGCAAGAATCACTAAACCAGTATATGGAGATGGTTAACCGTTGATGTTAGCCACTAATTATCGTTTAACAAATATGTTTCCTCCATTAGGTCAAAAAGTTTGCGGAGACTTGGAGTTGTGAAGAAGAACTGAGGGTGTAGATTTTATGGTACAGCTAGTTTTGAGTGGTATTAGAATCATTAATGGTAATTAAAAGTACTGTAAATTAAGGAAATTAGCTGTTTGTTTGTTTTTGGGTTTAACTCATATTTCAATGAAAGATTG



gi|164343024|gb|ES807853.1|ES807853 UFL_644_16 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|| ||||||||.||| |||
AAAGTGTCGAAGGAAATTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGAGCATGTATTATGCATCTCTTGTGGCCTACCACATATTCTTCAATTCAACCAAATATCTCTATTTCCTCCTCCTCCTTATCTCTTCTCTGCTTTACATTTTCGTGTTCGCAAAAGAGATGGGAAATATAAAAGAATGGGCAGCTTTGTATTCATCAGCTGCTACTAATGATGGAAACAGCACTTTCTGGGAATTTTTACATCCTCCACAAATCTCTCCTTCCTATCATTCCAATCATTCTTATTTCAAGCTCTCGACTTCGGTTTCAACTTTTTCTCACATCAACTAATTATCTTCTTACTTCTTGGCTTATATTAAGATGTTATCGGTACTTTCTTTTCTTTTCTTTTCTTTTTTAAGATTTGAGTTGGAGTGAATTTAGATGTTTTCTCATATGAGTTAGTTAGATGGAATTATAGGATTTTATATGTAAATTGGATTTCCTACTCTCTCTCTCTTTTTTTTTTTTTTTGTTTATGCTTCTGTATGTTGTGAGGTGGTATGCATCTCGTCATCTTATATGTAAATCTAAGGTTTGGATGTTGTCTGTCAAAAAAAAAAAAAAAAAACTCGAGAACCATTGGATCACTTTACAAAGATAAGTTGGTTGATGAGGGACTCAATTTATTCTTTGAAATGGTTTCCAAAGGGATCACTCCTGATGTTGTTGTTTATAGTTCTTTGGTTAGTGGATTGTGTAGTTTAGGTAGGTTAAAGGAAGCTGTGAAATTTTTCGATGAAATGATTGGTCGAGGGATCGCTGCCGATTTGGTCATGTACAACTTGTTAATTCATGGTTTTAGTCGAGAGGGAATGTGGAAAGAAAGCATAAAAATTTTCGATAGGATGGTCGGAGAAGGAATTCTCCGGACAAAAAACTTTACAACCTTGATTAAGTGTTTGTGCAAAAAGGGGAAAGTGGTAAAAGCTTATGAAATGTTTGCATTTCTGAGGCAAAAGAAAATAAACCCAACCTTGGTTACTTTAAAATCCTTCTGGGAGGGATTATGTGGGCCAGGCAATTTAATGGAAGGAGCTAAACTTTTTCCGGGCCAAAACCCGAATCAAGGTTTCCAAGGCCAAGGTTTTAAACCTTCAAAATTTTTTAATTTAAGGGGCTTTTGGGAAAAAAATCAAAAAAAAATCAAAGAAAAGGGTTTTTCCCCCTTTTTTTTTCGGAAAAAAGGGGGTTTTTTTCGGGGG



gi|164363674|gb|EV488380.1|EV488380 139C08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||| ||||||
AAGGCGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
CACGATGACAGATTGTTTGAAAAACACATCTTTCTTGTGAATTCTGCAACCTTTGGAGTAACTTAAGAAGACATGGGGGAACAGAGTTTAATTGCCAATGATGTCACCGAATTGATCGGTAACACGCCACTGTGTTTATCCCAACAATGTTGTAGATTGGATGTGTTGCTTAAAATTGTTGCAAATTTGAAGTGAAGTGGAACTCTGCTCCAGTGACAATGACAGGATTGGATATAGTATGATTTGCTATGCAGAGGAGAAGGGTCTCATTGTACCAGGCGAGAGTGTGCTGATAGAGCCAACTAGTGAGTATACCGGAATAGGGTTGGCATTCAATGGCAGCTGCTAAGTGGTTACAGACTCATAATTACGATGCCTTCTTCAATTGAGTTAGAAAGAAGAATGTTCCTCCGAGCTTTTGGAGCTGAGCTGGTTCTTACTGATCCAGCCCGGGGCATGAATGGGGCTGTTCAAAAAGCTGCGGAAATTATGTCAAATACTCCTAATTCTTACATACTTCAGCCATTTGAAAACCCTGACAAACCAAAGATCCATTATCTGACAACCGGACCAGAGATATGTACATGCAGTGGATGAAATGTCCATGTCATTGAATCTGATATCGGGACTGGAGGTACTGTCCCCGTGAACCGCACCTCATCTAGCACAACAGAATCCTAACCTAAAGTCGCCGGTGTGACCCAGTTGAAAGTCCGGCGTCTTGC



gi|164353482|gb|ES808173.1|ES808173 UFL_315_76 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| |||||||||| |
GAGGTATCGAAAGAACGAG

EST sequence (targeted fragment marked with yellow):
CAGATCCCAACATTGTACTCTTGCTCATTGGTAATAAATCCGATCTTCGTCACCTTGTGGCTGTCTCAACCGAAGATGGGAAATCCTTCGCGGAGAAAGAATTCCTCTACTTCATGGAAACTTCTGCCCTGGCAGCTACTAATGTCGAAAATGCATTTGCCGAAGTTCTGACACAGATCTACCATATCATGAGCAAGAAAGCTATGGAGACCAGCGAGGAAGGGAATGCTTCAGCTGTCCCATCGAAGGGAGAGAAAATCGATGTCAGTAAAGACGTGTCAGCTATGAAGAAGGGAGGTTGCTGCTCAAGCTAGGATGATCACACTAATCTGAAGTCAGATTGTTTAAATGATGCGGCCGGGGTTTCGATTTCATCATAAACCTTGGTTTTGTAAAATTTTCTTAAAAGGGTGCCCCTAAAGTAGGAGATCTGAGCAGAGATTGATTTAATTTTTCATTCATTTTTTTCCCTGATGACTGTTATTGTTAGTAGACAAGAGGATTACGAAGAAGAGGGTCTTACACTATTGCATTTAAAAAAAAAAAAAAAAAAAA



gi|5048268|gb|AI729416.1|AI729416 BNLGHi13318 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to guanine nucleotide regu

TTCCACAGCTTTCTTGAAC
||||| |||||||||| |
AAGGTATCGAAAGAACGAG

EST sequence (targeted fragment marked with yellow):
GCTGGTTACAGAGCTGAGGATGACTATGACTATCTTTTCAAGGTGGTTTTGATCGGTGATTCCGGTGTCGGAAAGTCAAATCTGCTCTCGAGGTTCACCAGGAACGAGTTTAGCCTCGAGTCCAAGTCCACTATTGGTGTTGAGTTCGCTACACGTAGCTTGAATGTTGATGGAAAGGTCATCAAGGCTCAAATTTGGGACACTGCTGGTCAAGAAAGGTATCGTGCCATAACAAGTGCCTATTATCGAGGAGCTGTTGGTGCACTTCTTGTGTATGATGTTACACGACACTCCACATTCGAAAATGTCGAGAGGTGGTTAAGAGAGTTGAGGGATCACACAGATCCCAACATTGTAGTCATGCTCATTGGTAATAAATCCGATCTTCGTCCCCTTGTGGCTGTCTCAACCGAAAATGGGAAATCCTTCGCGGAGAAAGAATCCCTCTACTTCATGGAAACTTCTGCCCTGGAAGCTACTAATGTTGAAAATGCATTTGCCGAAGTTCTGACACAGATCTACCATATCGTGAGCAAGAAAGCTATGGAAACCAGCGAGGAAGGGAATGCTTCANCTGTCCCATCAAAGGGAGAGAAAATCGATGTGGGTAAAGACGTGTCANCTATGAAGAAAGGAGGTTGCTGCTCAAGCTAGGATGATCACACTAATCTGAAGTCAGATTGTTTAAATGATGCGGG



gi|164272597|gb|ES810339.1|ES810339 UFL_180_67 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||| ||| ||| ||
AAGGTGTCCAAATAACCTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGAAACTGATAATAAAATCGAGAGTTCTCTGTATATAGGTTAGAAACGAATTTTGTAACANCTGTAGTTTTTCGTGTATTTACTTGTTTAGTTTTTATTACTATGTTTCATAGTAGTTGACTAACATGTGCATACAGATCTTATGCTTGCAGGGATCAGTAGATGGACCTGAACAGTAAGTTGTTTTTTTTTTGGTTGTTTATGCTTTCAACCTCTGGCCTTTAGGCTCAAAGAAATAATTTTTCTTTCAGATATGTTGCAATCATGAACGCGATATTCTCTGCCCAACGCTCTTCGGTTCCTATAGATTCTTGTTACATAGGTTCTCAAAATTCAGCCTTCCTGCAGCAGGCTTCTTACATAACTGGTGGTGTACATCATAAACCGCAAAATTTGGATGGGCTGTTTCAGTATCTCATGACTATTTTTGCTACTGATTTGCATTCTCGCAGTTTCATACATCTTCCTAAGCCTGTTGGGGTTGATTTTCGCGCCTCATGTTTTTGCCATAAAAACACCATTGACATGGGCTACATATGTTCTGTATGTTTGTCAATTTTCTGCAAGCATCACAAGAAATGTTCCACCTGCGGGTAAGCTGTTGTAGCTGCAAGTTGGATTCCATTTTTTATGTTCTTCTCCTCATGTATGCAAAAGTCTTATCTATCAAACAATTAAAAGTTCAGTTGGTTCTCAAAAAAACAAAAAATTCTGTGAGTTCTCGAACTTTTCTCCGACAGCAGTGCTGGTTGTCTGGAATCAGCTTCATCAATTTCTCTCCTGTGAAACCCAAACATCCTTTTGGTGTTTGGGGATTTTTTTAACCATCCTCTAAACCCATGTATGGTAAGTTGAATTTTTAACTGCCAGTGCAGGTCTGTATTGGGCAAGCTCCATTTAAGGGGGTTCGGATCTGACAAAAGAAAAGACCCCGAAACCTAAGTTAATTAGGGACTTACGAAAGTTTTATATCTACAAATTTGGGCAAGTTTTCTGCTTTACATTTTGGTTTCTTAAAAAACCAAAACTTTTCCTTGGCCACCATTGTAATTGCGGAATTTGGCCCCAAAATTTTAAAGGTAGGGGGGCCCCCCTTTAAAAAAAAAAAAAAAAAACCGAAAATTTTTTAGAGGGCGGGGCCACTTATTTCCCCCGGGGGGGGACAGAAATCTCCAAACCGCCTTGGGGGGTTAAAAACCGGGGCCGTTTAAAACGGGAGGGAAACACGGGTCCAATAAACCTGTGGAACCCCCCTGCCGTGGGTTAAAAAACCCCCCCCCTCCCCCCGGCGGGGG



gi|78343284|gb|DT563558.1|DT563558 EST1074198 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||||.|.|
AAGGTGTCGAAAGGATTAT

EST sequence (targeted fragment marked with yellow):
TCGAGAAGAAAGAGAAATGAAGTTGGACCAAAATTACACATCACAAAATTGATGTCAATCAGAAGAGAATCATCCATGAGAAAATGCATTCAACAGCATATTCTTCAGCTACTTCAATTTTCCACCGCCTTAGCACTGTAGCTTCTTCAAAGCTCCCTCTTTTACCTTCCCTCTCTCTATATCGCCATGTCCAGAATTTTGAGATTTGCAAATATTAGGAAAGCTGTGGAATCTGCTATTTCGAACCAGAGGTCGAACCGTTCGGGATTTAGGAATTATGCGACAGTGGTTTCTGTCGGGTTGCATTTGCCACAGTATAGAGTGTTCTCCCATTATAGGTTCAACAGTGGAGGAAAGGCTCCAATCTTGTTGCAGAATACAAAGGAAGGGTTGTGTCGAGGTTATTTTGCCAAGAACCGTTCCTTCGTTTCTGCAAGTAGTGCAGTAACTCATCGTGCCCAAGTTGCTTGGAAAAGGCTTACACAAAAATGTTCTGCCGGTGGTCGAACATTCCCTCAGATAAGCATGACTGCTCAAGCAGTCAGCTTAGCTTTGTCACACTCGCACTTGATAGTACCTGGTATTTTTGGCTTGACATGTGGACGAATAGCATTGGCACAGAGGACTTTAATAGAAACAGATTACTACCCATCACAGAATACTTTATCAATGCGTGCACGAGATGGACACGCTTTTGTTTCTGCTATACTACTTTCAGCTGTAGAAGGTGTTATTTTGCTGGTGAGAGCTTTGTTTCTTGCGGTTTTGTTCTCTCCTAGCATAATAATGGCACCATTTGCCGACGCATTTGGTCCACAGT



gi|164340753|gb|ES823336.1|ES823336 UFL_396_47 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|| ||||||||.||| ||
AATGTGTCGAAGGAAATTC

EST sequence (targeted fragment marked with yellow):
GGCACGAGGGAGAGTCAAGTCCTGTTCGGTATCATACTGAAGAGAAATGGAATAAGCCTTCTAGACCCGTTCAGTATGACGTCGAAGAGAAATGGAATAAGCCATCGAGTCCTGTTCGGTATCGTGTCGAAGAGAAATGGAATAAGCCATCTAGTCCTGTTGGTTATGGTGTCGAAGAGAAATGGAGTAGGCCTTCGAGTCCTGTTCGGTACCATGTCGAAGAGAAATGGACGAACCGGCCTTCAAGTCCGGTTAAGGAACGTCCACAACAAGTTCCGGATTTCATTACCAAAGTTCAAACTCAAGCTAGCCGACCAAACAAGTTCGGTCCTCTCAGCGCAACATATTGGCGCCAGACACCAGCCACGACCACCACAACCGTTGGTGGTCCGTGGAACAACCAGAGTCATGGTGGGGGATGGTCCAAAGGACACGAGGCTAACCTTAGCCAACCAACCAGCAACATCAACACTGCCGTGGAATACTTAAAGGAAGCTGTGTAACCACCTGCTCCCAGGTATGATGGATATCCTAACACCATTGACAGCAGGGAAGCTGAAAGAAAATATGGCGACTTGGCTGTCGGAACGCCGCCNATCGGAAGTTATGGCAGAACCATTGATAGCAGGGAAGCTGCNAGAANATATCGTGGAACAGCAGTGTGAAAAAGGCAAACTATNTGGGATAAAATTAAGTGTGTNTTANGATATAATAAGCTTTGGGCTTTAATCCAAGGCTGTGTCAAGTTGTTTACACCTAAGTTTGATGATGATGGAGAATGTTTCATG



gi|84146333|gb|DN760575.1|DN760575 G.hir-stem 3082 PCR amplified cotton stem cDNA Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||||| ||||
AAGGAGTCGAAAGA-CTTG

EST sequence (targeted fragment marked with yellow):
CAAATAACTTGAGAAGACATGGAAGACAAGGATTTAATTGCCAAGGATGTCACTCAATTGATCAGCAAAACGCCACTGGTATATCTGAACAAGGTTGTTGAGGGATGTGTTGCTCCGATTGCTGCGAAGTTGGAGGCAATGGAACCCTGCTCGAGTGTCAAGGATAAGATTGGCTATAGTATGATTGCGGATGCGGAGGAGAAGGGTATCATTAAACCGGGTGAGAGTGTCCTATTCGAGCCAACCAGTGGTAATACCGGGATAGGATTGGCATTCATGGCAGCTGCTAAGGGTTACAAACTTGTAATTACGATGCCTTCTTCAATGAGTTTAGAAAGGAGAACGGTCCTCCGAGCTTTTGGAGCTGAACTTGTTCTCACAGATCCGGCTCACAGCATGAAAGGGGCTGTTCAGAAAGCTGAGGAAATTCATGCAAAGACGCCCAATTCTTTCATTCTTCAGCAATTTGAAAACCCTGCCAACCCAAAGATCCATTACGAGACAACCGGACCAAAGATATGGAAAGGCACAGGCGGCCACGGTAGATATACTT



gi|109880593|gb|DW509563.1|DW509563 GH_TMIRS_135_B06_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
|||| ||||||.|..|||
AAGGAGTCGAAGGGGCTTC

EST sequence (targeted fragment marked with yellow):
CTAACAGCTTCCGCCGAGCTCTTCTCCGGCTTCGGGGAAGCTGAGGAAAGAGCCGTCGCTGAGTCAAGACGAGTTGAACCGTCGAGTGGAAGCGTTCATAAAGAAGTTCAATGAGGAAATGAGATTACAAAGGCAAGAATCACTAAACCAGTATATGGAGATGGTTAACCGTTGATGTTAGCCACTAATTATCGTTTAACCATAGTTTTAAATCATGAAGTAACAGAAAATATGTTCATTAAAAAATATGTTTCCTCCATTAGGTCAAAAAGTTTGCGGAGACTTGGAGTTGTGAAGAAGAACTGAGGGTGTAGATTTTATGGTACAGCTAGTTTTGAGTGGTATTAGAATCATTAATGGTAATTAAAAGTACTGTAAATTAAGGAAATTAGCTGTTTGTTTGTTTTTGGGTTTAACTCATATTTCAATG



gi|164315853|gb|ES840511.1|ES840511 UFL_065_88 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||| .| ||
AAGGTGTCGAAATGAAGTG

EST sequence (targeted fragment marked with yellow):
CTCTAATTAATTATTAATTTATTTATATAGTTATATATATATATATATTATTTTATGATTCTATTAATGTCCTTATTGATATTATTTTTATATAATTAATGATCTAAATTTATATGTATATCTCTTACTAAGAACATTAAAAAATGCTAGTATTGGAAAAGAAAAGCGTGGGGGGGGGAGACAAAAGATAAAAATGTAATTTAAGTTGTAAACGTAACTTTGCTTTTTTTTCTATTGGCCCTTAAAAGGTCATTAATAATAATAAAGTGTAATGCGATGAAAATTTTTAAAGGCCCTAAATATTCTTCAATTGTTCCCTTCAAGGCCACCAAAGACTATTTTTATCTATCTTTATATTTTGTATAATTATTACTAATTAATAGATCGCAATATGTCTCAATTCTGGGGAAATAAAATCTATAGGCCATTTTTTAATTTGGGTTTTACGTCGATTTTTTTACATTTATTTATCCAAACCGGGACTTATATCAAAATGAGTCAATGAGAGTCAACAAGTGAAATCTGGTTATATACCTACGAATGGTCAATTTGTAATACAAATTTTTGGGGTGAAGTTTGTGAAGTAAAGCTGTGGAATTAACGTTCAATAATACCATTTGAAAGGTGGTGACCTAGAAACTTCAATTCAAAAGAAAATTCTCCCAAATCGAAGTTGGGGAAAAAATTTCAATGTGGATTAACCGAAACACCCCTTCTGGATACGGGTCTATAATCTCTTCCCCCGCTTCCCCAAAAGGAGAAAAGGGGTTGTTTTTATTTGAAGATTAAAAATTCTCCCGAGGAGGGGCGGTTTTTAAAATAGTTTTAAGAATGGGAATATTTCGGGGGCCCC



gi|109851662|gb|DW480641.1|DW480641 GH_RMIRS_026_E06_020_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA

TTCCACAGCTTTCTTGAAC
.|||| ||||||||| |||
GAGGTATCGAAAGAA-TTG

EST sequence (targeted fragment marked with yellow):
GTTTCTGCTCTTCTTATCAAAACCCTTTTTTTCTTAATCAAATCTGGTTCAGTTCGCATAATAGTAACGCATAAAAGTATGGTTGGGAGGATTTTATTACTAGTTCTTTTTATGAATGCTGCCTTTTTAATAGTGAATGCTGTACCAGAAACATGCCCTGCTGATCTCGGTGGAAAATGTGGTGAAGATAGTGAATGGGAAGGGGAATTTTTCCCTGGAGTTACTAAAATTAAGTATGAGGGTCCTTCTAGCAAGAATCCACTTTCATACAAATGGTACAATGCAGAAGAAGTGATTCTTGGGAAGAAAATGAAGGACTGGTTGAGATTTAGTGTTGCATTTTGGCATACATTTCGTGGAACAGGTGCCGATCCTTTTGGTGCACCCACAAAGTCTTGGCCATGGGAAGATGGTACCAATTCCATTGCTATGGCCAAAAGAAGAATGGGAGCCAACTTCGAATTCCTAAACAAGCTTGGAGTTGATAGGTGGTGTTTCCATGACAGGGACATTGCTCCTGATGGCAAAACACTAAAGGAAACTAATTCAAACTTGGATGAAGTCGTGGCACTTGCTAAAGAGCTTCAGGGGGACAAGATCCGTCCACTGTGGGGTACTGCTCAACTATTTATGCATCCTCGTTACATGCATGGTGCTGCTACAAGCTCTGAGTTGGGTGTTTATGCCTATGCTGCTGCTCAAGTTAAGAAAGCTATGGAGGTGACACATTATCTTGGGGGATCTTGTCTCGTCTCTGCCTGATG



gi|109851451|gb|DW480430.1|DW480430 GH_RMIRS_025_C10_038_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA

TTCCACAGCTTTCTTGAAC
.|||| ||||||||| |||
GAGGTATCGAAAGAA-TTG

EST sequence (targeted fragment marked with yellow):
AAAGTTTCTGCTCTTCTTATCAAAACCCTTTTTTTCTTAATCAAATCTGGTTCAGTTCGCATAATAGTAACGCATAAAAGTATGGTTGGGAGGATTTTATTACTAGTTCTTTTTATGAATGCTGCCTTTTTAATAGTGAATGCTGTACCAGAAACATGCCCTGCTGATCTCGGTGGAAAATGTGGTGAAGATAGTGAATGGGAAGGGGAATTTTTCCCTGGAGTTACTAAAATTAAGTATGAGGGTCCTTCTAGCAAGAATCCACTTTCATACAAATGGTACAATGCAGAAGAAGTGATTCTTGGGAAGAAAATGAAGGACTGGTTGAGATTTAGTGTTGCATTTTGGCATACATTTCGTGGAACAGGTGCCGATCCTTTTGGTGCACCCACAAAGTCTTGGCCATGGGAAGATGGTACCAATTCCATTGCTATGGCCAAAAGAAGAATGAGAGCCAACTTCGAATTCCTAAACAAGCTTGGAGTTGATAGGTGGTGTTTCCATGACAGGGACATTGCTCCTGATGGCAAAACACTAAAGGAAACTAATTCAAACTTGGATGAAGTCGTGGCACATGCTAAAGAGCTTCAGGGGGACAAGATCCGTCCACTGTGGGGTACTGCTCAACTATTTATGCATCCTCGTTACATGCATGGTGCTGCTACAAGCTCTGAGTTGGGTGTTTATGCCTATGCTGCTGCTCAAGTTAAGAAAGCTATGGAGGTGACACATTATCTTGGGGGGGAGTTGTCTCGTCCTCTGCCTGATG



gi|78347775|gb|DT568049.1|DT568049 EST1078689 GH_TMO Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|| |||||||. .|||||
GAGTTGTCGAAGTGACTTG

EST sequence (targeted fragment marked with yellow):
TTTGAGTTTTAATATCTCTCTCAAATCAGACCAAGATCTGATGTAACTCTTTATTCCTCTACACCCACAAATTTTTATTCCTCAAAAATCCATTTTAATAGTGCTATCTATGTCCCTCTCACATCACATAAACTAAACCAAAATCCATCATTATCAAGTGATTAGAGGACAATCATATCCCTCCCTTGGCGGAAGAGTTTAGGTTGTATGATTCCATAGGTTTTCTAAGAAAAGAAAATGACAAGGTGTTTCAGCTTAACCGCAGCCAGAAACCGGTGTTACAAATCATCATTCCTCAAAGCGGGGCTTCGATCCACCATCACGGACCTCCAAGATGGCACCGTCATGCACTGTTGGGTCCCCAAGACACATAATGACTCCAAGCCTAACCTCCTCCTCATCCATGGACTGGGAGCCAACACAATGTGGCAATGGGGTGACACCATTCGTAAGATGATCCCTTTCTTCAACATCTTCGTACCCGACCTTGTCTTCTTCGGGGACTCCTACACGACTCGGCCTGAACGCTCCGAATCGTTTCAGGCTCAGTGCGTGATGCGAGTGATGGAAGCCAACTCGGTGAAGAAACTCAGCCTGGTAGGCCTCAGCTATGGTGGGTTTGTTGGGTACAGTTTAGCAGCGCAGTTCAGTGAAGCTGTTGAGCGAGTGGTGATCTGCTGCGCTGGAGTTTGCATGGAAGAGAAAGATTTGAAGGAAGGAGTTTTCAAGGTATCTGATTTGGAAGAAGCTGCCGATATTTTAGTACCCCAA



gi|164322349|gb|EV496496.1|EV496496 sg090E09 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||||||||| |||||
TAGGTGTCGAAATAACTTA

EST sequence (targeted fragment marked with yellow):
AACTATGCTATGGCCGAGGACCAGGCTATCCTGATGAATCGAAAGTACACGTATTATTGGAGAGAGACAATTCAATAAAGCTGTGGATCTGTTTAACACAGCATCTGAGCAATTAAAAGGAAAGGTTGATTATCGCCACTCATATGTAGACTTTTCCCAGCTTGAGGTTACAATTCCTAAAGAAGGAGGAGGTTCTGAGGTAGTTAAAACATGCCCCGCTGCAATGGGATTTGCTTTTGCAGCAGGAACAACTGATGGCCCTGGGGCATTCGATTTTAAGCAAGGAGATGACAAGGGAAATCCTTTCTGGAGGCTTGTGCGCAACTTACTTAAAACTCCTGATAAAAAACAAGTACAGTGTCATTCTCCAAAGCCCATCTTGTTAGATACTGGTGAAATGAAGCAACCATATGATTGGGCGCCTTCAATACTTCCAGTACAGATCTTTCGGATAGGACAGCTAGTCATTCTCAGTGTACCTGG



gi|164292146|gb|ES847354.1|ES847354 UFL_143_27 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||| |||||.||| ||
AAGGTATCGAAGGAAAGTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGAGTTGGTATCACTTGGTTCGTCGGCTCGGGTTTGTGCTGTTTCCGCAGTCAGAGATTGTGGTATGATTTAATAGCCCGGATTTTGTGAAAGGAAGCTATGGAAAAATCATGTTATTTGGGAGCAAGTCGTCTGCCATTGTACTCTAATAGAATGTAATTCCTTTTCATACTAATTTATCTTTTTATTTCATCGGAAAATGAAGGTTAAATGCTCAAAGTAGTATCCAACTTTGTCCAATTTTTCAAAAAAAAAAAAAAAAAAAA



gi|164361928|gb|ES850195.1|ES850195 UFL_678_56 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||.|..|||
AAGGAGTCGAAGGGGCTTC

EST sequence (targeted fragment marked with yellow):
TAGTGGGATCCAAAGAATTCGGCGCGAGTTAAAGCCAATCCTCAAGGTGGCCGAGCATTGAAAGTGGCGAAGCCCAAACGCCATCAGACACTGGAGAGCACGTGGAAGATGATAACGGAAGGGAGAGCGATGCCATTGACGAGGCACTTGAAGAAGTTGGACACGTTTGAGAATCACGGCCGCGAGATCAACGTGGAGACCATGGCCGACTCGCCGTTGGTGAAGAAATCGGAGACGTTCAGGGACCGGACTAATTACCAGCTTCCGCCGAGCTCTTCTCCGGCTTCGGGGAAGCTGAGGAAAGAGCCGTCGCTGAGTCAAGACGAGTTGAACCGTCGAGTGGAAGCGTTCATAAAGAAGTTCAACGAGGAAATGAGATTACAAAGGCAAGAATCACTAAACCAGTATATGGAGATGGTTAACCGGGGATGTTAGCCACTAATTATCGTTTAACCATAGTTTTAAATCATGTTTTTTTTTAAGTAACAGAAAATATGTTCATTAATTTGTTTTTTAAATATGTTTCCTCCATTAGGTCTAAAGAAGTTTGTGGAGACTTGGAGTTGAAAAAATTTTGAAAAAATACCCAAAAAAAAATGAAGAAAAACTAAGGGTGTAGATTATGGTACAGCTAGTTTTGAGTGGTATTAGAATCATTAATGGTAATTAAAAGTACTGTAAATTAAGGAAATTAGCTGTTTGTTTGGTTTTGGGTTTAACTCATATTTCAATGAAAGATTGATATGTTTATAAAAAAAAAAAAAAAAAAAAAAAGCTGGGACTGGGAGATGGCGATGTGAAACACGGCGATGATCGGGGGAAAGGAAAAGGTCAACCTTCCTGGGGGGGCGGGGG



gi|164274905|gb|ES815980.1|ES815980 UFL_304_96 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||||.| |
AAGGTGTCGAAAGGAACTA

EST sequence (targeted fragment marked with yellow):
GGCACGAGCATCAATCGAATTCCCCTCTACACTCTCTCCAAATAAAAAATCAAGAATCTAAGAAATTCGATTCACCATATTCATGGCCCGTTCCCTTTCTCAATCCGTTCTCAAGCTCCGCCTAATCACCAAACCTCACCCTTCTTCCTCTCGTCTCCTTGCCGTCCGAACCCAATCCAACCAACCCAACCCTTCCGACTCCTCCGATGCTTCATACGATTCTTCCTCTGATCCGCTCCTGCGGAAACTTGAAGACGCCATCCACCGGATCATCGTTCGCCGTTCCGCTCCCGATTGGCTCCCTTTCATTCCCGGATCCTCTTACTGGGTCCCGCCGTCCACGGCCCAATCTTACGGCCTTGCCCAGCTTGTTGAGAAATTGGCGAACCCGTTGACCTCGGAGGAATCCATGTCCACCACTTCCGCCCGAGGCTGGCCCTCCTCTGACTATTTCATCAAAGGTGGATCCCCCGCATCCAGTGGGAGGTAGACTTTAATATCAAAATCCTTCCTTCTTAATTCCAAGGATGAAAGAAGGAATGAAGCCATGGGCCTATTCCTGAATAATATCAGCTGGGAAATTCCAAAATGGCTGGTGGTGGGATAAGAAAGTAAATTTGTTGGCAGGATTTTTTAATCAAAATGGAAGAACTTGTTGAAATCCAAGTATCAAGGAAAGCTGTGGAAGCCAAAATAAATTGGTTTTTTACTTCCAACCGGAAAACTTTTGTATTTTAAAAAAGGGGGACCTTATCTGAGTTATGGCATCCAATGGTGGCCTGATTTTTAATTTTTTTAAAAAAATAACTTTTTGGGAGATTGGGGGG



gi|164361175|gb|ES840721.1|ES840721 UFL_068_23 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| ||||||||| |||
GAGGTATCGAAAGAA-TTG

EST sequence (targeted fragment marked with yellow):
ACTTGCTAAAGAGCTTCAGGGGGACAAGATCCGTCCACTGTGGGGTACTGCTCAACTATTTATGCATCCTCGTTACATGCATGGTGCTGCTACAAGCTCTGAGTTGGGTGTTTATGCCTATGCTGCTGCTCAAGTTAAGAAAGCTATGGAGGTGACACATTATCTTGGGGGAGAAAATTATGTATTTTGGGGTGGTCGTGAGGGATACCAAACACTCTTGAACACAGACATGGAAAGAGAGCTTGATCATATGGCAAAATTTCTTGAAGCTGCTGCTGCCTACAAGAAGAAGATTGGATTCAATGGAACTCTACTGATTGAACCTAAGCCTCAAGAACCTACCAAACATCAGTATGACTGGGATGCTGCAACAACACTTAACTTCTTGCATAAATATGGGCTGCTTGGAGAATTCAAACTTAACATTGAGTGTAACCATGCCACACTCTCTGGTCACAGCTGCCATCATGATCTTGAGACTGCAAGAATCAATGGAATGTTAGGAAATATTGATGCAAACACTGGGGATCCTCAAGTTGGTTGGGACACAGATCAGTTCTTGACTGATGTCGGGGAGGCAACCATGATTATGCTAAGTGTGATAAGAAATGGAGGATTAGCACCAGGAGGCTTCAACTTCGATGCAAAATTACGGAGAGAGAGTACAGATGTTGAGGACTTGTTCATTGCTCATATTAGTGGAATGGACACCTTGGCTCGTGGACTCCCAAATGCTGCTAAACTGATTGAGGATGGTTCTTTGGCTGAGCTTGTTCCTAAACGATATTCTAGCTTTTACACAGAACTTGGTGCCCAAATTAAGGCTGGTAAAGTTGATTTTGAAAGCTTGAAAAAAAAGCCATGGAATGGGGAAAACCCAAGGTTGCTTCACCCA



gi|164318332|gb|ES816788.1|ES816788 UFL_240_48 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||||||||| |.||| |
AAGGTGTCGAACGGACT-G

EST sequence (targeted fragment marked with yellow):
GGCACGAGCCGAGGTGTCTCTTTCACAAAACAGGTGAAAAAAAAGCAAAGAAACAGAATACTACTGTTACTGTTAGTATTAAAGAAAGAAAGAAGCTTTTAAAGTCCAGAGATAGAAATCAAGTCCAAGGAGAACAACGCACTACAGACAAATTCCAATTATATTATTAATAATCAAATACCTATAATATTTATATATAGGAAAACCCCACCCTTACTCAATAAAGCTTCAGACTGGGTTTTCTATGTGAAGTTTAGGATTTTTTTTTCTTTGTGATGGATCCGCCAGCTATGATGAGCGATGGAAGGTACAATCTAGCAGAGATCTGGCAGTATCCCATGAGTGAATCTGGGATAAGTAGGGGTCAGTTCGGACATGGGTTGGCTCAGTTCGGGGACCCCAGTCGAGAGATTTCCGGCAATGATCCGGTTAGCTTGGAGCTGCAGCAGAGAAGGGGTGGTATGAGGCGAAGGCGTGACGGAGAAGATGAAACAGCTAAGGTTGTCTCTACTAGCTCCACTAGTAGTGGCAATGCCGTGAATGATGGGTGCGGGAAGAGAATTAAAGCAGCAGGAGGCAGAGAACAAATCATGAATCTAGAGTTGAAGCAGACCCCAGTCAGGCAAGCTGTGGAAGAAAAGTTCACCCTTCCGAGCACCTAACAAGATTACATCACGTACGAGCACGAGGGGGTCAGCTACTGATAGCCACGCTTACCTGAAAGGCTAAGAGAGAAAGAATAGTGAAAAATGAAGATTCTCAGGATTTGGTCCGGTTGGCATAAGTATGGGCAAGCATTTGTCCTGATGAATAATTATTACTTTCATCACTACGCGTCGGGTCAGTTCTATTAATGAACTTGAAGCAGTAATTTCAGAATAAACCTGGCTATGAATAATTTCTTGAAAAATTAGGGCCAAAAGGGTTGATGCTCTGTATGGCATCCGGTCCCAAGTGAAAAGGATACAGGGGGGGACATCGCCGAAGGGTGGCCATTGGCAGGGTTTCAAAGGGAAAAAAATGGGAAAAGGAAACCCTTGGATTCAAATATGAGATTAAATAAATTTGGGGGGTTTATTTGGGGTGGGCAAAAAAATATTTTTTCCTTTTTACAAAAAGGGGGGGAGCCCCCATTGGAAAAAAAAAGAATTATATTTTTAAGGAAAGGGTTTTTTTTTGTGTTTGTGGGAAGGGGGTGCTCTTTTCTTCAATATTAGTCAAAAAATTAAATAGAGAGGGAGGATACCCTCATAAAAAAATTATTTTTTTTTTTTTTTTTTTGTAAAAAAA



gi|109856213|gb|DW485192.1|DW485192 GH_RMIRS_051_E07_055_R Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA

TTCCACAGCTTTCTTGAAC
|||||||.||||| |||
AAGGTGTTGAAAGTACTAT

EST sequence (targeted fragment marked with yellow):
CTTGTTGATAGATAACATGCCTGAGCCTCCACAGTGCCGGCATCTTTCAGGTTTCACGCCAGGAGGAACTCCTTCTCCACCACAAGCTTGACAAAGCACGGGAGCTTGAAATGTCACCGTTTTGCTACATCCTTGAACAGCTTCCATAAAAGATAGTTCAATTGCAACCTTGATATCTTCACCACCCATTTGATTTCTGAATATATCCTGCACGTTGAATATATCATGAAAGTTGTGGAATTTGAATGGATTGAAATCCTCTTCGCTAAAGCCGCTATTATTTTGCTGTTGTTCAAATGCTTCATGGCCAACCTGATCATACTCTGCACGCTTGTTCTCGTCTTTTAAAACCTCATAGGCCTTGGAAACCTCTTGAAATTTTTTCTCAGCTTCAGGATCATCTTTATTTACATCTGGATGGAGCTTTTTCGCAAGCCCAAAATAAGCTTTCTTTATTTCAGATGCAGTAGCATTCTTGCTTATACCAAGTGTATCATAATAATCCCTAGCGGACAAAGGAGCAGAGCCATGAATTAGCCGTTTTGCACCCAAGTTCACATTAAAAAGTCCAAAAACCAAGCAGTTCCTAGTTTTAGCGTATTGAGGAGTGTGTTTTCCAATAACGTTAACGGGATTGCCAAGTCCGGCTGTGAAACTCCTCGAACCCCCAGAAATCAGAGTAGAATTTGGGTGGTGAAAAAGGGTAGAAGAAAGGGAGTGAGAGAGCCGAAGCAAGCAGTGAATAAGCCTAACGCCATTAGACCCAT



gi|84164080|gb|DR452728.1|DR452728 CM005G03 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||||||||||||| |
AAGGTGTCGAAAGAAACAG

EST sequence (targeted fragment marked with yellow):
GGCGGCTGATTTATAGTGAAATGGATGATAAATTTGCTCAAGAGCTGTATTCAGAAAGTTTGCACCTATCCAATTTACAATTAGACCGTTCTTCGAGTACCAATGGTTTCAATAAGGCGGACATCCAGGATGAAGATGGATCTTTATGGGGTGGTTCTGATGAGGAATTAGATAAAACATCTGATTTAGACCGTGAATGGAAGAGAAGGCATGACCAATTCCACACGATTGGTTATCGTGATGGGCTGATAGCAGGGAAAGAAGCTTCCGCACAAGAAGGTTTTAATATTGGCTTTAAGCAATCAATTCCCATAGGGTACAACTGGGGCATAGCAAGAGGTGTTACCAGCGCATTGGCTTGTCTTCCGGATGAGTTGAGGGAGAGATTGATTGAAACACAAGAGAATAGAGATAAATTCCAGGAGTTATATGAATCTGTGAATTTGCTTTCAGCTACAGATGCACTTAAGTTTGTTCCATGATGATATTTTGACAAAGAAAGCTGTGGAACAGAGCGGGTCTACTGAGGCTAGTGTTAGTGTAGGTGCTGCACAAGAACATATCTCAAATTCTTCTAGTTTGGGAACTTATAGTACAAAGCTCCAATCACTGCTTCTTGAATCTCCTGAAA



gi|164344941|gb|ES834123.1|ES834123 UFL_373_73 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||| ||. |
AAGGTGTCGAAAAAATATA

EST sequence (targeted fragment marked with yellow):
GGCACGAGATTAGAGCACTGGGAGATGCCCTTGTCCATCGCCTAAGGTTTCCTCCAGGTCAAAGTCGAGCAAGTAGCACTGACTATCTCCGGGAGACTACCAATCAAAATGGCAAACAAAATCCGCAAAAATTTGTTGTGTTACACCTTCAATTTGATAAGGATATGGCTGCCCATTCTGCCTGTGATTTCGGTGGGGGTAAGGCTGAAAAATTGGCTCTGGCCAAGTACCGGCAAACAATTTGGCAAGGAAGAGTTCTCAATTCACAGTTTACAGACAAAGAGTTGAGAAGTCAGGGGCGTTGCCCGTTGACTCCTGAAGAAGTCGGATTGCTGCTAGCAGCTTTGGGTTTCGACAATAATACCCGTCTTTATCTTGCCTCCCACAAGGTATATGGAGGGGAAGCTAGGATTTCCACACTACGAAAGCTATTCCCCTTGATGGAAGACAAAAAGAGCCTAGCCTCTTTGGCGGAAAGGGTCCATATAAAAGGAAAAGCTTCTTTGTTGGCTGCTGTTGATTACTATGTCGGGATGCATAGTGACATCTTTGTCTCAGCTTCTCCTGGGAATATGCACAATGCTTTGGTGGGACATCGAACTTTTGAGAACATGAAGACCATAAGGCCAAATATGGTATTGTTGGGCCAACTATTCCTTAACAAAAACATCAGTTGGTCGCAGTTCCATCAGGCAATGGTGGAAGGGCATCAAAACAGACAAGGGCAACTCAGGTTAAGGAAACCAAAACAGTCCATATATACATATCCTGCTCCTGATTGCATGTGCCATGCTTAAGCCGTATTTACCCCAGGAAGCCAAAATGCCTTTACCATTGATATCGCAATAAACAACAAAGAGACCCCTTGCTATATTCCAGCTGGTGGTTCATTTGTAACTATAATGTTAATAACCACCAATCCCTTTTCTCCTCTCCCTTTTGATAAAAATATTTTTTACATCCAATGTTCCGAAGGGGGCATGGTGGTACTGTATTGATGGGTGGTATTTTTATATAAAAAAGCTGTGGAAGTTAAACATTGTGGGATGTTTATTACATTTCATTCCGGCAAATTTCAATTTTTGTTGGAAAGGCATTCCCGGGGAAAATTTTTCCTTTTTTTGTAAAACTTTTTATTGGGGTCAAAAAATTTAATTTCAAAAATCCTTTTTCCTTTTCAAAAAAAAAAAAAAAAAAAAAAAAATCCGAAAAAAAAAAATTCTTCTAAAAAGGGGGCCCCCGCGGGGGCCCCCCCCCTCCAATTTTTTTTCCCCC



gi|164365146|gb|ES850412.1|ES850412 UFL_665_22 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| |||||||.. |||
GAGGTTTCGAAAGGGGTTG

EST sequence (targeted fragment marked with yellow):
CTCCCCCAAAACCCTCACCACAAAAGAAATCTCTTCTATTTTTCCCCACTCTACTGCAAAAATGTTTCGATCCGTTGCTAGATCGGCCGCCGGTAAGAGCCTCCTCCGACGAGGATATGCAACCGCCGTACCTGAACGGAAAGTCGCTGTCTTGGGCGCAGCTGGAGGGATCGGCCAACCCTTGGCTCTCCTCATGAAGCTTAACCCTCTTGTTTCTCAACTGGCTCTCTATGATATCGCTAACACTCCCGGTGTTGCCGCTGATGTCAGCCACATCAACTCTAGATCTGAGGTTGCCGGATATGTAGGTGAAGAGCAGTTGGGGAAAGCTTTGGAGGGATGTGATGTTGTCATCATTCCAGCCGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCAACATTAATGCCGGAATCGTCAAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCCAATGCACTTGTCAATATGATCAGCAACCCTGTCAATTCAACTGTTCCTATCGCAGCTGAGGTTTTCAAGAAGGCAGGGACATATGATGAAAGAAAGTTGTTTGGTGTAACCACCCTTGATGTGGTTCGGGCTAAGACTTTCTATGCTGGGAAGGCTAAAGTAAATGTTGCAGATGTTAATGTCCCTGTTGTTGGTGGTCATGCTGGAATTACCATTCTCCCACTATTTTCTCAAGCCACACCAAAAGCCAATTTACCTGAAGAGGATATCAAGGCTCTCACAAAGAGGACACAAGATGGGGGCACTGAAGTTGTGGAAGCCAGGCTGGAAAGGGTTCAGCAACATTATCAATGGGCTATGCTGGAGCCATTTTCGCTGATGGCTTGCCTTAAGGGAATGGATGGCGGTTCCCGACGTAGTGGAGTGCTCATTTTGTGCAGTCAACTGGTACTGAACTCCCTTTTCTTTGCTTTCCAGGGGGAGGGTTTGGAAAGAACGGGGGGGGGAGGAAAGTTTTGGGGGGTTAGGGGCCCTCCCCTCTGGAATACCAAAAAAAAAAAGGGGGTTGGGAAAAAGCCTTCAAACCCAAAAAACTTAAAATTCCTCCTTTTTTTGGAAAAAGGGGGGATACAAGGGTTCTCGCCCCAACCCCAAAAAAATTTAAACCCCCGGGAAAACCTACTTTTTTTTGAAAATTTTTTTTTTCCCCTTTTTAACCCCCCCCCACACCCCCCAAAAAAATTTTTTTTTATTAAAAAAAAAAAAAGTTTTTTTTTTTTTTTTTTTTTTT



gi|164301012|gb|ES845481.1|ES845481 UFL_123_12 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||| || ||
AAGGTGTCGAAACAAGTTT

EST sequence (targeted fragment marked with yellow):
GGCACGAGATTTGAAGGAATAGACGTTTCTGCAGTGACTTCAAAGATGAAAGTTACCCTTTCGAGAAGATGTGAACAAAACCGACGCCGCTCGGAAAGTGAAGCTGCTCCTGCCATGTCTATGCATGCCATTAGCTTACTTCTTGAAGCTATTTTCTTGAAAGCAAAATCATTGCAGCACCTCGGAAGGTTTGGAGGTATGCCCTTTCAATTTCCTTATATTTTACTAGAGATGACAAAGCCCGAGCTGCTGCACAGGTTACCCACCTATACGCTCTGAAAGACTGAAATTTAGGCTTCCTTGATGATTCAGTGTGATAATCATTGTTACCTATTCATGCTTTTTAAATTTTTTTGCCTGATAATTTTACAGAGGCTGCTCAATCGTGCAAAATTATTTTGGAGACTGTTGAATCTGCGTTGCCTGATGGCCTGCCGGACAACTTCTCTACGGATTGTAAATTGCAGGAAATTTTGAACAAAGCTGTGGAATTGCTTCCGGAGCTATGGAAACTTGCCGGAGATCCCCAAGAAGCCATATTGTCGTACCGGCGGGCTCTCCTCTATTACTGGAATCTTGATACCGGAACCAAAGCGAAACTCGAAAAAGAATTTGCAGTGTTGCTTTTATATAGCGGTGCTGAAGCAAGCCCTCTAACCCTCCGTGCGCAGATGGAAGGATCATTTGTGCCAAGGAACAATGTTGAAGAGGCCATTCTTTTATTACTAATTCTACTTAAAAAGTTTCTTCTCAAAAGGATCGGATGGGGATCCGTCGATATTGGATCATCTTGCTTTTGCGTTATCTGGTTCGGGGGGAACTAGAAGCCTTAACCTCATCAGGTTGAAAGAATTGCCGCCCCGAAATTATTGGAAAGAAAAAAAAAAATATCGTACGTTGGGTTCTCTGCTATTACGGGGAAGGGTGAAGAAAAAATTGGTTTTTAATCCTTTGGGGGAATCTTTTGAAGAACCGAAAAAAACCCGGGAACGGTGTCCTGGAATTTGTTTGGAAACCTCAAAAATTTTGGGGG



gi|164367582|gb|ES844734.1|ES844734 UFL_114_06 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||||| ||||
AAGGAGTCGAAAGA-CTTG

EST sequence (targeted fragment marked with yellow):
CAGGTAAGCAAGAAAAATATTACTTATGGAATTATTTTTATTTCAGCAACATTTTTATTTTCTCAGAGGAAAATATTGACAAGGCACTGCCATAAAATCCCACCAAATAATCCTCTTTGATTTACAAGAGAACTTTCTTGTAGTCTAGACAAGTAACTTGAGAAGAAATGGAAGACAAGGATTTAATTGCCAAGGATGTCACTCAATTGATCGGCAAAACGCCACTGGTATATCTGAACAAGGTTGTTGAGGGATGTGTTGCTCCGATTGCTGCGAAGTTGGAGGCAATGGAACCCTGCTCGAGTGTCAAGGATAGGATTGGCTATAGTATGATTGCGGATGCGGAGGAGAAGGGTATCATTAAACCGGGTGAGAGTGTCCTAATCGAGCCAACCAGTGGTAATACCGGGATAGGATTGGCATTCATGGCAGCTGCTAAGGGTTACAAACTTGTAATTACGATGCCTTCTTCAATGAGTTTAGAAAGGAGAATGGTCCTCCGAGCTTTTGGAGCTGAACTTGTTCTCACAGATCCGGCTCGCGGCATGAAAGGGGCTGTTCAGAAAGCTGAGGAAATTCATGCAAAGACGCCAAATTCTTTCATTCTTCACCAATTTGAAACCCTGCCAACCCAAAGATCCATTACAAAAACACCGGACCAAAGATATGGAAAGGGCCAGGCGGAAGGGTAAAAAACTTGTCTCAGGAATTGGAAATGGAGGAACGTAACAGGAAGCAGGAAGTTTCTTAAAAAGCAAAATCCCAACTTATACGTCTTTGGGGGGGACCGGGTGAAAAGGGCAGGCCTTTCGGGGGGAAAACCGGCCGCGTAAAAAAACAGAGGCTCGGGGGGCGGAAACATTCCGGGGG



gi|164350706|gb|ES847911.1|ES847911 UFL_149_29 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| |||||||.. |||
GAGGTTTCGAAAGGGGTTG

EST sequence (targeted fragment marked with yellow):
AAGAGCAGTTGGGGAAAGCTTTGGAGGGATGTGATGTTGTCATCATTCCAGCCGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCAACATTAATGCCGGAATCGTCAAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCCAATGCACTTGTCAATATGATCAGCAACCCTGTCAATTCAACTGTTCCTATCGCAGCTGAGGTTTTCAAGAAGGCAGGGACATATGATGAAAGAAAGTTGTTTGGTGTAACCACCCTTGATGTGGTTCGGGCTAAGACTTTCTATGCTGGGAAGGCTAAAGTAAATGTTGCAGATGTTAATGTCCCTGTTGTTGGTGGTCATGCTGGAATTACCATTCTCCCACTATTTTCTCAAGCCACACCAAAAGCCAATTTACCTGAAGAGGATATCAAGGCTCTCACAAAGAGGACACAAGATGGGGGCACTGAAGTTGTGGAAGCCAAGGCTGGAAAGGGTTCAGCAACATTATCAATGGCCTATGCTGGAGCCATTTTCGCTGATGCTTGCCTTAAGGGACTGAATGGCGTTCCCGACGTAGTGGAGTGCTCATTTGTGCAGTCAACTGTTACTGAACTCCCTTTCTTTGCTTCCAAGGTGAGGCTTGGAAAGAACGGTGTGGAGGAAGTTTTGGGGTTAGGCCCTCTCTCTGAGTACGAGAAAGAAAGGTTGGAGAGCCTCAAACCAGAACTTAAATCATCTATTGAGAAAGGGATCAAGTTCGCCAACCAGAATTAACCTGAAGCTACTTAGGATTTCTTCCATTAGCCCAATCCGAAATCTTTAAAAGTTTTTTTTTTGTGTACTGTTTGAATTTCGGGTGCAAGCAGCCACCGCTTTAATGGAAAAGGAAAGGGCCTTACTTACCCTCAGGTTTTCAAGTAATAATTTCCCAGTGAACTTGTACGAAGGAAGGTTTGGGTTTTAAAAAAAAA



gi|109850932|gb|DW479911.1|DW479911 GH_RMIRS_022_E03_012_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA

TTCCACAGCTTTCTTGAAC
||| |||||||| ||.||
AAGATGTCGAAATAATTTT

EST sequence (targeted fragment marked with yellow):
AAAAAAAAGTTTCAGACATTTCCGTCTCTCTCGTTCTTCTCAACATCTTTTTCCTTGATGTGAGCTTGGGTCAAGCAAGAACAGAGATTAAAAAAACCGAAAAAAAGAAGAAATTCGGATCTTTTAATAAAGCTGTAGAAGGAGGTGCTACTAAGCAGTTTGGAGATAGAATGAACACAGACCTTTAGGCCTGTTTGTCTTTGGTGTTGGCTAACATGTGAAGAGTACTGAGTTAGCTTGTCAGCAATATATTATAGCCAGAAGCTAATGGAGGAACGTCTCAGCAAGGGACCATCATCATTAAGGCAAGGTAGCCTTAAGTCCAGTCTGTCAGGAAGATCAACTCCAAAGGGTTCTCCTACATATCGGAGATTGAATTCAAGCCGAGCTCCAAGAAGAGAAGCTAGAAGTGGTGCTGGTGGCATTCAATGGTTTAGGAGCAACCGTGTAGTCTATTGGTTGCTTTTAATTACTCTTTGGGCTTACCTTGGATTTTATGTCCAATCCAGGTGGGCTCATGGACATAAGAAGGAGGAATTTTTAGGTTTCAATGGCGATCCAAGAGATAAGCTTGTGGATGCTGAACAGAACACACGACGAGATTTGCTTACTGATGACAGTTTGGTAGCTGTTAATAATATAACTAACAAAACTCAGGTCCATGTTGATAGAAAGATTGATGTGATTTTGGCCAAGAAGGGGATTTTGTCTCGTCCTCTGCCTGATG



gi|164283168|gb|ES833083.1|ES833083 UFL_439_64 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||||||||||| |||| |
AAGGTGTCGAAAAAACT-G

EST sequence (targeted fragment marked with yellow):
GGCACGAGGAAAAAGAAAAGTGGGGTTCAGTAAGGAGAAAAACAGATGAAACTCTTCATGTACACTGGAAAGGAGCTGCAGAAATAATCGTAGCCATGTGCTCAGACTATTATGAGAGCAATGGGGGCATAAGGTCCATGGATGAAGACCAAAGGAGCAGAATTGAAACAATAATCCAAAGTATGGCCGCTAGTAGCTTACGATGCATTGCTTTTGCTCATAAGCAAGTCTCACAAAAAGAGATGGAATGTGTTGATGATAGCGAAAAGACACACCAAAGAATAAAAGAAGATGGTCTAACCTTGCTAGGGATAGTTGGTTTGAAGGATCCATGTCGCCCAGGTGTCAAAAAAGCTGTGGAAGCTTGTAAATCTGCAGGGGTGGACATCAAAATGATTACTGGAGACAATATTTTCACAGCAAAAGCTATAGCTGCAGAATGTGGAATTCTAGGAGCTGATTACAATGAAGAAAGTGGACAAGCTATAGAAGGTATTGAATTTCGAAATTACACACCTGAAGAGAGAATGGAGAAGATCGGGAAGATCTACGTGATGGCAACGTCCTCTCCATTTGACAAGCTTCTGATGGTACAGTGCTTGACACAGAAAGGTGATGTAATTTGCGGTCACAGGTGATGGCACTAATGATGC



gi|164352704|gb|EV498680.1|EV498680 sg147G01 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|.|||||||||| | | ||
AGGGTGTCGAAATACCCTG

EST sequence (targeted fragment marked with yellow):
AGTGGCACACCCCAAAAGCATGAAGTCCGTATAAAGATACTCTTCACTGCTTTATGTCACACTGATGTGAGTACTGGGAGTGTAAGGGTACACTCCTCTGTTTCCTCGTATACTTGGTCATGAAGCCTCAGGGATCGTGGAGAGTGTGGGTGAGGGTGTGAATGATTTGAAACCTGNAGATCATGTGCTCCCTATCTTCACCGGAGAATGCAAAGAATGTCGCCACTGTCTGTCAGAAGAAGGCAATAACATGTGCGAACTGCTTAGGATCAACTGCGACCGATGTGTAATGCTTGCTGATGGGAAAACCAGATTTTCCATCAACGGCAAGCCTATCTACCACTTTGTTGGAACCTCGACCTTAAGCCAATATACTGTCGTCCATGTAGGCCAGGTTGCCAAGATCAGTCCAACCGCCCCTCTTGATAAAGTCTGTCCCATAAAGCTGTGGGATATGTACAGGTTATGGGGCCACTGTGAATGTTGCTAAACCCAAAAAGGGTCAAACTGTTGCAGATACTGGACTGGGTGCCGTTGGTCTTGCCGCCGGATAAATGTGCACAGGTATGTGGGGCTTCTCGGATCATCGCTGTTGATGTGAACCCCAAAAGATATGAAAAACTAAAACGTTCGGAAAACAGAATATGTGAATCCAAAAAATCGATAAGCCATACAAAAGTAATTGAA



gi|164359997|gb|ES804787.1|ES804787 UFL_641_08 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|| |||||||| |...|||
AAAGTGTCGAATGGGTTTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGAAGATCAAGAAATTACACTTGATGATTTATATTCTCTTAATCTTAGTAAACTTGACCAATGGAAGTGCATCATACCGGCATCAGAAAGTGAATGGGTGGAAGCCTCAGAGGATGAAGATGATGAAGATGATGATGATGATGATGATAGCGAAGATGAAGGTGAGAGTGGTAGCGATGATGAGGAAACTGACGATGATGATGAGGCAAAGGGTACAAATGATGGTACGAAATCAGTTCAAATGGGAGATGCTGTTGCTTTAATAAGGGGCGAGGGAAAGAATTTGCGGAGGAAAGAGAAACGGGTCAGGATAGAGCAGATTAGAGCTAACCTTGGCCTCTCAGATTCACAGAGAACACCAACGCCTGGAGAATCATTGAGGGATTTCTATAGACGTACTAGTTTGTACTGGCAAATGGCTGCCCATGAACATACTCAGCACACTGGCAAGGAACTCCGTAAAGATGGTTTTGATCTTGCTGAGGCTCGTTATAGGGAACTTAAACCACTTCTTGACGAGTTGGCCATATTAGAGGCAGAACAGAAGGCTGAAGAGGCAGAAGGACCAGAAACAAGTTCGAGAAAGAGAGGGAAAAAGAGAGTTTAAGAATTTAGCACCCAGCATTTGCAATACTTTCAGAGTTTGGGTAAGCTGTGAAATTTTAAAAATTTTGTTGGTTTAATTTATGGCCTCCAAACTAAGGTTTGTCACGCACGCGAACACTACGAATGGCCGTAGAACTGTTCTTTCTATGGTAAAATATGTATTANATCTGAAGAAATTTTGGTGGATATAATATTTTTGTATTTAAAGTTATATTGATGAGGGAATATGGATCGAAAAAAAAAAAAAAAAA



gi|164287297|gb|EV495252.1|EV495252 sg046A01 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|| |||||||| ||||||
GAGTTGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
ATATTCTCTTCTCTTTGAAAAATCGAAAAATAGTTTCCAAAGGGAAACTTTTGCTCGTAATATACTCAGATCTGCTCTACAATCCTCACATTTTGAATAGCCAATATGGGAGGTGGGTACAGAGTACTTCATATGGTTAGAACATTCCTTTCGTTTCTGCCTGAAGTTCAGAGTGCTGATAGGAAAATCCCTTTTAGAGAGAAGGTCATCTATACTTGTGATCTCCCTCTTTATATTCCTAGGTTTGCAGTCAGATTCCCCGTGTATGGAATACATTCTACAACGTGGTGCTGATCCGTATTATTGGATGCGTGTTATCCTTAGCATCCAACCTGTGGAACCGTTATAGGAACTTAGGCATTACCCCCATTAGTATACTTCCGGTTTTGGTGAATGCAACTACTTGGCTAGGTTCAAAAGATCATTAGAGGTTAGACAACAAGTGTAACGTTGAGGATACGTGCGCTTTTAAAATGGGGGTTCAAAAAGCTGTTGAGGGATCCTTAATTGCTAGTTGGTAGAGGAAGTTGGCGTAACCGTATCTGTCTTGGTAATGTTACGGAAAGTGGTAAGGTACACGCTACGGGTGTATAGGAAAATGG



gi|164312227|gb|EV483749.1|EV483749 044G10 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||| ||||||
AAGGAGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
GGCTTATATATCATTTATAGCTTCACAGATTGTACTGAAAAACACCATCTTTCTTGTGAATTCTGCAACTTTTGGAGTAACTTAAAGAAGAAATGGGGGAAAAGAGTTTAATTGCCAAGGATGTCACCGAATTGATCGGTAACACGCCACTGGTATATCTCAACAATGTTGTAGATGGATGTGTGGCTAAAATTGCTGCCAAGTTGGAGGCAATGGAACCCTGCTCCAGTGTCAAGGACAGGATTGGATATAGTATGATTGCAGATGCAGAGGAGAAGGGTCTCATTGTACCAGGCGAGAGTGTGCTGATCGAGCCAACTAGTGGTAATACCGGAATAGGGTTGGCATTCATGGCAGCTGCTAAGGGTTACAGACTCATAATTACAATGCCTTCTTCAATGAGTTTAGAAAGAAGAATGGTCCTCCGAGCTTTTGGAGCTGAGCTAGTTCTTACGGATCCAGCCCGGGGCATGAAGGGGGCTGTTCAAAAAGCTGAGGAAATAATGTCAAAGACTCCTAATTCTTACATTCTTCAG



gi|109870647|gb|DW499623.1|DW499623 GH_TMIRS_038_A03_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
|||||||| |||||. ||
AAGGTGTCTAAAGAGACTG

EST sequence (targeted fragment marked with yellow):
ATTTTTTTGATTTACAGTTAGCCAAAGCAAAGCGATGACACTTCAAGCAACTTCCTGCAACTTTGGAGCCATTTCATCTCTGCTTCGTCCTCCTAAAATTTCCCGTCATCGTTTCGTGATCAGAGCTGAAGTGGAACCGTCAGAGAAATCTGTGGAAATCATGAGGAAATTCTCAGAACAATATGCACGTCGCTCAGGAACCTATTTCTGTATGGATAAGGGAGTTACTTCTGTTGTAATCAAGGGATTGGCGGAGCATAAAGATTCGTTGGGTGCGCCACTTTGCCCTTGTAGGCATTATGATGACAAAGCTGCCGAAGTCAATCAGGGATTTTGGAATTGTCCATGCGTTCCTATGAGAGAGAGGAAAGAATGTCACTGCATGCTCTTTCTCACTCCGGATAACGACTTTGCTGGCCAAGATCAGACCATAACATTGGAAGAAATCAAGGAAACAACAGCAAACATGTAACACTTGACGGTTTCAAATTTTGTTTCTTAAACAGTCATAACTTGTTTTTTGGCCCTCGAAAAAAGAAAAACAGAACAGAGGTCGAATTTTATATGTATATTTGTATTTCAACAGAGGGATAAATTCTTTG



gi|164369811|gb|ES849839.1|ES849839 UFL_658_71 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| ||||||||| |||
GAGGTATCGAAAGAA-TTG

EST sequence (targeted fragment marked with yellow):
ATTAAGTATGAGGGTCCTTCTAGCAAGAATCCACTTTCATACAAATGGTACAATGCAGAAGAAGTGATTCTCGGGAAGAAAATGAAGGACTGGTTGAGATTTAGTGTTGCATTTTGGCATACATTTCGTGGAACAGGTGCCGATCCTTTTGGTGCACCCACAAAGTATTGGCCATGGGAAGATGGTACCAATTCCATTGCTATGGCCAAAAGAAGAATGAGAGCCAACTTCGAATTCCTAAGCAAGCTTGGAGTTGATAGGTGGTGTTTCCATGACAGGGACATTGCTCCTGATGGCAAAACACTAAAGGAAACTAATTCAAACTTGGATGAAGTTGTGGCACTTGCTGAAGAACTTCAGGGGGACAAGATCCGTCCACTGTGGGGTACTGCTCAACTATTTATGCATCCTCGTTACATGCATGGTGCTGCTACAAGCTCTGAGTTGGGTGTTTATGCCTATGCTGCTGCTCAAGTTAAGAAAGCTATGGAGGTGACACATTATCTCGGGGGAGAAAATTATGTCTTTTGGGGTGGTCGTGAGGGATACCAAACACTCTTGAACACAGACATGGAAAGAGAGCTCGATCATATGGCAAAATTTCTTGAAGCTGCTGCTGCCTACAAGAAGAAGATTGGATTCAATGGAACTCTACTGATTGAACCTAAGCCTCAAGAACCTACCAAACATCAGTAT



gi|109838688|gb|DW237249.1|DW237249 GH_RTMF_11R_A11_InvR_11Aug04_095_F Root (free) - 3 weeks after planting Gossypium hirsutum c

TTCCACAGCTTTCTTGAAC
||||||||||||||| |
AAGGTGTCGAAAGAAACAG

EST sequence (targeted fragment marked with yellow):
GGGTACAACTGGGGCATAGCAAGAGGTGTTACCAGCGCATTGGCTTGTCTTCCGGATGAGTTGAGGGAGAGATTGATTGAAACACAAGAGAATAGAGATAAATTCCAGGAGTTATATGAATCTGTGAATTTGCTTTCAGCTACAGATGCACTTAAGTTGTTCCATGATGATATTTTGACAAAGAAAGCTGTGGAACAGAGCGGGTCTACTGAGGCTAGTGTTAGTGTAGGTGCTGCACAAGAACATATCTCAAATTCTTCTAGTTTGGGAACTTATAGTACAAAGCTCCAATCACTGCTTCTTGAATCTCCTGAAATCAAAGTACAATTCTTCCATCAAGGGGCTTCAACTCCTGATCGTTGTTGAAACTGAATGTGAATTCTTGTTTTCATCCATGAAGCTCAGAACTAGAATAAGCGTTTGAATATTTGGTTAAAAAGTGCTTAGCTCTTGTTTGTATGTGAACATGAATACAAGGTTGACTATTAATGGCACATGTAGTTTCTAATAGACCTGTACAAATATAAAAGTTTTCTTTTATGTAATGACCAAAAGACCCAAAATATCTAATGAACAC



gi|164346427|gb|ES829429.1|ES829429 UFL_187_22 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|||| ||||||| . ||||
AAGGAGTCGAAAAGTCTTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGGTCTATTCTAATCCGCACCTTCGGGACTCCTGTGCTTTCACATGTTGTGACTCTGGCATTAATTTACAGCGAACGACTGGATGGTAGATTCATAGCTTCCCTTGTGAATTGGGCTCTTCCTTTTGTGCAAATATACTTATACTTGTGTTCTTCTTGATAAATATGTTCAGCTCAAGAAACCTGGATTCGAACAATATAAGTGATTTACATTTGTCGTCATTGATGAGATGTACTATACGAATGTTCTGAAAAGCTGAGGAATTGTGTCCGACATCACCTTTCTGTGCACCTGTCTTCTTCAGGATGATATTTTGTACACCACTCCTGAATCTAATTCTCATGCTGTGCATCTGGAGCTTTCTTGTTTGTTATTTGATGGAAGTCCCGATTTGCACTTGGCACATATCGTTCTGATGGTCACAACTATGTGAATATCTGGTTCTATTGAAGAATAGACTGAGTTTTTTATCTTGAACAGCCAAAGGATGCCAAAACTTCATAGATGAAGAACCTGTTTGGGCCCTTTCATCTGTGACTTCTGAAACTGAGAGTAATGAATTTCTTGAAAGTTCTGCCGCAACAGAATAAAAAGAGCCACCTACTTCGAATTGCAAGAGAATGTCATGCATCTACTCAAACTGGCCTCCTGTGGATTGGAAAACTGCGCCTGGTCTCATTACGAGACCGGCACCTATTTCACAAACAATTACTGGATCCTAGCTCGTTGATTCACACACTATCCCTGATGGTACAATTGCAAATAGCCACTGATATGTTCATGGAAGACAATACAGACACTACTTCTCCACTTCCAATTTTGACCGACTCTGAAATTTTGGATCACCAGTATGGCAAACTTACCAATCCAACTGGTTCTGGGGTGAAAAACCACTTTTGGCACGATAAAATTCGGGTGTGACAAACTCAAGGGGATCTTGGTGAATTAATTCTTTTGTCAGAAAAACCTTCAGGTGGATTACCCTTGAATTAACCAAACAAACATCACGTTAATTACTGGCTTCCTTTTCACCTGGAATTTCCCCTAAAAAAATTGTTTTTTTCCTGGGCAACCCAAGTTCAATTTCAGCTTTTTTTTAAACGTGGACACTGGGCGGAAGCTTTTTGTTCTTTCAAATACCTTTCCCCGCACCTCTGGGGAAAAATAAAAGAAAGGGGCTGAAAAATAAATAAATAAGAAAGTGGGGAATTTCCCCTTAAAAAACCCGCTCGCAAAAAAAAACCCAGAAAAAGGTCAAAAAAAAA



gi|164359436|gb|ES850324.1|ES850324 UFL_663_28 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||||||||||| |.|
AAGGTGTCGAAAGCATTCC

EST sequence (targeted fragment marked with yellow):
GGCACGAGGTTAGAGAGCTTTTCGTCATGGCCAGGGAGCATGCTCCATCAATCATATTTATGGATGAGATAGACAGTATCGGATCTGCTCGAATGGAATCTGGAAGTGGCAATGGTGACAGTGAGGTGCAGAGGACCATGTTGGAGCTTCTCAACCAGCTGGATGGATTTGAAGCATCTAACAAGATCAAGGTTCTGATGGCTACAAATCGAATTGATATCTTGGATCAAGCTCTTCTTAGGCCAGGCCGAATTGACAGGAAGATTGAATTTCCAAACCCGAACGAGGAGTCTCGTCAGGACATCTTAAAAATACATTCTAGAAGAATGAATTTGATGCGGGGGATTGACCTAAAGAAGATTGCTGAGAAGATGAATGGTGCTTCTGGTGCGGAGCTTAAGGCGGTTTGCACAGAAGCAGGGATGTTTGCTTTGAGGGAAAGGAGGGTCCACGTAACACAGGAAGATTTTGAGATGGCAGTGGCGAAGGTGATGAAGAAGGAGACTGAGAAAAACATGTCCTTACGAAAGCTGTGGAAGTGATTAAGCTTTATTTTCATTATTGTGCTTTGCTTTCTTTGTTACGGGCAAAAATGGATGGAACATGTAAAACTAGACTTATACAATGACATTATAATACCGTGCGCCTGTTTTCTTTGACAAAAGCCTGTCCGAAATTTTTAGGTGAAGGACTTAGATTTTTATGAAAAAAGTTTGGTTTCGGGTTTTAATCAAAAAAAAAAAAAAAAAAAAAAACTTCGAAGAGGTACTTTCTTAAAAGCGGCGCCGGCGGGGCCCCCATCTCGATTTTTTCCCCCCCCCGGGGGGGGGG



gi|164334021|gb|ES806175.1|ES806175 UFL_619_57 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
|| ||||||||. ..||||
AAAGTGTCGAAGTGGCTTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGAAGGATACATTTCCATAGTATTGCTTTTGAGCCTTCTCAATCAACCCCTGTACTTGAGAAGTATAGCGCATCTAGAGCAGTTGCTTAACTTGCTGGATGTCATCATTGACCATGCGGAAAGAAAGCCTCTTTCATCTGAGAAATCGAAGGCATCTTCCACTGAACAAAAACCTGCTTTGCAAATTTCAATGTCTGATGCTGACATCAATGCTGAGAATCATGATGCTCTTGAGGTTTCTGAGTCACCCTTAAAGACCGTGGACTCTTCCACAGCATCAACGTCTGATGGAAGTAATGAATGTGATGCTCAGAGTGTACTTGCCAATCTGCCACGAACGGAGCTCCGACTTTTATGTTCCTTGCTTGCACGGGAAGGTTTGTCAGATAATGCATATAGTCTGGTGGCAGAGGTAATGAAAAAGTTGGTTGCTATTGCTCCAAGCCATTGTCGTCTTTTTATTTCTGAGCTGGCAGATGCTGTACAAAATTTGATTAGATCTGCCATGGATGAGTTAAAATTGTTCGGTGAAGCTGTGAAATCTCTACTAAGCACAACTTCTTCTGATGGAGCTGCCATTTTAAGGGTTTTACAGGCACTAAGTTCTCTTGTGACCTCAATAACTGAGAAAGAGAAGGATCTGCAGCTGCTTCCTGAAACAGAGCGATCTTCTGCTCTTTCTCAGGTGTGGGGCATCAATACAGCCTTGGAACCTTTGTGGATAGAGTTGAGCATTTGCATAAGCAAAATAGAGAGCTATTCAGATTCTGCACCAGATTTATTAGCTCCATCCAGCACATCCACATCAAGACAATCTGGTTTACACCACCCCTACCTGCAGGCACTCAGAACATCTTACCATATATAGAATCTTTTCTTTGTGATGTGCGAGAAAGTACATCCTGCACAACCGGGTTCTGGTAATGATTTTGGCATGGCTGCGCTTTCGAAGGTTAAGAATGCCGGCACCCATCTGCCCGGCCGCAAAAAAATGCTTCTTCTGTTTCAAAATTTGATGAAAAACATGTTGGCCTTTGTAAAGTTCTCAAAAAAACATAGGAAATTGGTTTAATGGCTTTTTTTCC



gi|164317770|gb|ES807722.1|ES807722 UFL_632_67 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||| |||||||.||| | |
AAGATGTCGAAGGAAGTGG

EST sequence (targeted fragment marked with yellow):
GGCACGAGATTGACTTTCCTAAGCCAAAGATTGGTGTTGCTGGTGCTGGAAGTGCAGGAATAGGGGTTGTCAATGCTGCAAGGAAAACAATGGCAAGGATGTTAGGAAATACTGAGCATGCTTTTGATAGTGCAAAGAGTCAATTCTGGGTTGTTGATGCTAATGGTCTCATAACTGACGAACGTGAAAATATTGATCCAGACGCCCTGCCATTTGCAAGGAACACTAATGAAGCTGGTCGTCAAGGATTAAGGGAGGGTTCAAGTCTTGTGGAAGTGGTGCGGCAGGTGCGGCCTGATGTGCTTCTTGGGTTGTCTGGTGTTGGAGGATTGTTCTCCAAAGAGGTGTTGGAGGCTCTTAAAGGTTCGACTTCAGCTAAACCAGCTATCTTTGCAATGGCAAACCCTACAAAAAATGCTGAGTGCACCCCAGAGGAAGCTTTTTCGATTGTAGGCGACAACATTATATTTGCAAGTGGAAGTCCATTTAGAGATGTTGATCTTGGAAATGGTCAAATTGGGCATAGCAACCAAGGAAACAACATGTATCTCTTTCCAGGTATTGGCCTTGGAACTCTTCTGTCTGGCTCTAGGATCATTTCGGATGGCATGCTACAGGCTGCAGCAGAACGTCTGGCTGCCTACATAACAGAAGATGAAGTTCTCAAGGGCATGATATTCCCTCCAATATCAAAGATAAGAGATATAACAAAGGAGGTAGCAGCAGCTGTGGTGAAGGAAGCTGTAGAAGAGGATCTGGCAAAAGGATATCGTGACATTGACGCTAGAGAGCTCCAAAAATATGTCAGAACGAGGAGGAAGTTTTAGAATATGTGGAGAACAGCATGTGGAGCCCAGAATATCCAACTCTAGTTTACAAAAGGGGTTAGGTGGGCTTGGTGGATATGCCATCTTTTTATTTCCAAATGGAAAGAAATAGCCAGGGGGGTTGATCTTTGCTGGGGCATTGGGTTCCAGCCAAAAAAACTTCCAAATGTTCATGGGGCATAATTACCATTAAAAAAATTTGGAATTTGGGGGAAAGGGATTTTGGGTTAATAAATAATGCACCCGTCCTTTATTCTATAATATTTGGAATAAGAATTTTATGAAGTGGGAAAGAGAAAATTGGTTGTGGGAAGAAACAAAGGCTTTATATTTTTCCTGGCGTTTTCTCCTTTTGGTTTTGGGCCCCACCCCTAAATTTCCCAAATTGAAAAAAAGAAAAGAAAATATATATTAATATATTAAAAAAAAAAAAAAAANAAAAAAAAGAAAACACCACGAGAGAAAATAATTTTTCTTAGGAGAGGGGCGCGCCCGGCGGGGCGCCCCCCCCCTCAAATTTTTTTTCTCCCCCCCGGCGGGGTGGGGGGGGG



gi|109831858|gb|DW230417.1|DW230417 GH_OVfbl_01-01-10R_E08_InvR_28Jan04_056_F Ovules - day of anthesis from a fiberless mutant G

TTCCACAGCTTTCTTGAAC
.|||| |||||||.. |||
GAGGTTTCGAAAGGGGTTG

EST sequence (targeted fragment marked with yellow):
GGTAAGAGCCTCCTCCGACGAGGATATGCAACCGCCGTACCTGAACGGAAAGTCGCTGTCTTGGGCGCAGCTGGAGGGATCGGCCAACCCTTGGCTCTCCTCATGAAGCTTAACCCTCTTGTTTCTCAACTGGCTCTCTATGATATCGCTAACACTCCCGGTGTTGCCGCTGATGTCAGCCACATCAACTCTAGATCTGAGGTTGCCGGATATGTAGGTGAAGAGCAGTTGGGGAAAGCTTTGGAGGGATGTGATGTTGTCATCATTCCAGCTGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCAACATTAATGCCGGAATCGTCAAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCCAATGCACTTGTCAATATGATCAGCAACCCTGTCAATTCAACTGTTCCTATCGCAGCTGAGGTTTTCAAGAAGGCAGGGACATATGATGAAAGAAAGTTGTTTGGTGTAACCACCCTTGATGTGGTTCGGGCTAAGACTTTCTATGCTGGGAAGGCTAAAGTAAATGTTGCAGATGTTAATGTCCCTGTTGTTGGTGGTCATGCTGGAATTACCATTCTCCCACTATTTTCTCAAGCCACACC



gi|5046377|gb|AI727525.1|AI727525 BNLGHi8327 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to CALNEXIN HOMOLOG PRECURS

TTCCACAGCTTTCTTGAAC
|||||| ||||.||| | |
AAGGTGACGAAGGAAGTGG

EST sequence (targeted fragment marked with yellow):
GATTCCAAACCCCAACTACTTTGAGCTTGAAAAGCCCGACTTTGATCCTATTGCTGCCATTGGTATTGAGATTTGGACAATGCAAGATGGTAGATTATTTGACAATATTTTGATAGCCAAAAACGACAAGGTTGCCGAGTCATATCGGGAGACCACGTGGAAGCCAAAGTTTGAGGTTGAGAAGGAAAAACAGAAGGCTGAGGATGAAGCTGCCGATTCTGCCAGGCTTGCAGGCTTTCAAAGGAAGGTTTTTGATGTCTTATACAAGGTTGCTGACATTCCTTTCTTAAGCAAATACAAGCATCAAATTCTCGATCTTATTGAGCATGCTGAGACACAGCCGAACCTCACCATTGGTGTCTTGGTCTCTATTGTGGTGATTATTCTCACGATTTTCTTCAAGCTCATTTTTGGTGGGAAGAAACAGCCAAGAGTAGAGAAGAAACCAGAGGTTGCTAAAACATCAAATGGTGAAGGAAGCAGTGGAAAAAAAGCTGAAGAAGCGGAGATAGAANAAACTGCTGCCGCTCCTCGCCGAAGGCGCCGTGACAATTGAGCAAATCTTAAAACAAAGGTANCTGGTGGCGACTAACAGTTTGAGTTTGGGCTAATTTTTGCACTGTAGGGGGTCTTCGTANCTGANATATTAC



gi|109857005|gb|DW485984.1|DW485984 GH_RMIRS_055_H07_F Cotton Normalized Library random primed Gossypium hirsutum cDNA, mRNA seq

TTCCACAGCTTTCTTGAAC
|||||||.|||||| .|||
AAGGTGTTGAAAGA-TTTG

EST sequence (targeted fragment marked with yellow):
AAAAAAACCCACTAAAAAAAACTCTGCGATTCCCCAATAGAGACACAGATAACCTTCCAGAAGTCGCCGCTTTTCAACAGTGTGAATTTGATGAATTTAGTTTAGAAAGTTGTGGAAATCTGCAATCTTTCTTTGATCTTATCCTTTTTTTGGATTAATTTGCAATAAACTAGAAGATTGAGCTATGAAGGAAGAAGATGTGAACCGTTGCCAGATTCAAGAATGGTACCCAAAATTTAAATCAGTGTCGATTAGGACATTCATTCATGAGCTTCCTGAATCTTTTGTCCAGTACCTACTCGATGATTCAGGACCTTTCCTCCTTCCTGCTTCAATCTCAAACGAGGATGCCTTTCCGAATAGAATTCATAATCCAGAAGAGGAGGAAGATTATCAAGTATCAGAAGGATCCGGAGATGGAGCAGAAGCTTTATCGGCCCCTTGTTTCCCAGAACTTGAGTTGAAGATTAAGGAGTCAATTGAAACCCTTGGGGGTGCAATCTTTCCTAAGTTGAATTGGAGTGCACCCAAGGACTCTGCATGGATAAGCACCTCTGGGACACTCCGATGCACTACATTCAGCGAGATTGCTCTCTTGCTTCGTTCATCTGACTCTTTGATCCATGATCTATGTCATGCATATGATTCATGCAGTGACAAAACCATGTCAAGCCCCCCCTT



gi|109890840|gb|DW519804.1|DW519804 GH_TMIRS_234_D12_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
|||||||||||| |.||
AAGGTGTCGAAATAGCTAT

EST sequence (targeted fragment marked with yellow):
GAACATTGATCTGGTCTATGGAGGAGGTAGCATACGTTTAATGGGTTTGGTTTCACAAGCTGTTCATGATGGTGGTCGCCATGTCATCGGAGTTATTCCCAAGACGCTCATGCCTCGAGAGTTAACTGGTGAAACAGTGGGGGAAGTGAAGGCTGTTGCAGATATGCATCAAAGGAAGGCAGAGATGGCTAAGCATTCAGATGCTTTTATTGCCTTACCAGGTGGTTATGGAACTCTTGAAGAACTACTTGAAGTCATTACCTGGGCTCAGCTTGGAATACATGATAAACCAGTTGGATTGCTGAATGTTGATGGATACTATAACTCATTGCTTTCGTTTATCGATAAAGCTGTGGAAGAGGGGTTTATCAGTCCAAATGCACGCCAAATCATCGTATCTGCGCCCACAGCAAAAGAGTTAGTAAAGAAATTGGAGGAATATGTCCCCTGCCATGAAAGAGTTGCTTCGAAGTTGAGTTGGGAGATGGAGCAGCTTGGCTATAAAACATATGATATATCTAGGTAATGCTTGGACTGCAGGAAGGAGAAGAAGGTAGATGGAATTTG



gi|5049841|gb|AI730989.1|AI730989 BNLGHi8357 Six-day Cotton fiber Gossypium hirsutum cDNA 5' similar to HYPOTHETICAL 28.1 KD PRO

TTCCACAGCTTTCTTGAAC
|||||| ||||||.|| |
CAGGTGTAGAAAGAGCTGG

EST sequence (targeted fragment marked with yellow):
GTCGAAAACGCTGGTGCAACCGATAGGGCAAAAGCGGCTGACGAATGTGGCCGTCGTGCGTTTGAAGAAACACGGCATGCGATTTGAAATCGCTTGCTACAAAAACAAAGTCCTCTCATGGCGTTCCCGGGTCGAGAAAGATGTGGACGAAGTTCTACAGTCCCATACGGTTTACTCCAATGTTTCGAAAGGGGTTCTTGCTAAAACCAAAAATTTGGTTGCTGCTTTTGGGACTGATGATCACACTAAAATTTGTTTGGAGATTTTGGAGAAAGGGGAGCTACAATTTGCTGGGAAGGAAAAGGAATCNCAATTTTCGATTCANTTTCGGGATATANCGACGATTGTCATGCAAAAAACCATCAATCCTGAAACTGATCGCCCTTACACCATTAGTATGATTGAGAGACTAATGCATGAAATTCATTTCGCTGTTGATCCCAATAGTAGTTCCAAAAAGCAGGCTCTAGAAGTTATTCGTCAGCTTCAAAATAACTTCCCCATAAAACGGTCGCCCATGAGATTACGACTCATANTTCCTGGACAGAACTTTCATTCTCTTTGTGAAAAGCTGAATGAATGGGGTGCTACCATTGTTTCCAAAAATGAATCCGGAACTCAGCTGTCAGTAATTTGTGAAATAGAAACCAGGCTTTTTCCGT



gi|109827453|gb|DW226137.1|DW226137 GH_HYPT_01-01-17R_F06_InvR_22Apr04_038_F Stem - 3 weeks after planting Gossypium hirsutum cD

TTCCACAGCTTTCTTGAAC
|||| ||||||.|..|||
AAGGAGTCGAAGGGGCTTT

EST sequence (targeted fragment marked with yellow):
GAGAAAAAAACAGAGCACATTGGAGAAAAGCGAGGGTTTGGTTCTTGAGAAGGCAAACAGAAGGGGATTAAGAGATACCCAATCGGAGATCGGGGAATATGGGTTGTTTGGAAGAAGATCCTGTGATACTGATCCTAGATTATCAGTTGATTTTGGCCGTTTATCCGTCGATGAGCCAAGGTTTTCCATGGATGAGCCAAGGGCTTCTTGGGATAGTTATTTGATTGGAAAACAGAACCCTAGGGTCAACGAGGAACCAAGTGTTGGGGAAGAAAGATTGAGTGTTGTAAAAGAGGAAGAAAGGATTAGCCCTGGTGGGTCAGCTCAAACGAGAGACTATTACGCGGATTCTTTGACTAGAAGGAGAAGAAGTTTTGACCGTTCTTCTTCCAACAGGAGGATAAGTTTCGGGGAAGCTGAGGAATTTAAGTCTTCCATTTCTAATGCTAAAGTGTCACCCGAGACTGTTGGGCTGTTTCATGGGGCGAAACTGTTGGTTACTGAGAAGGAATTGGGGGATTCCAATTGGTATTCTAATATGGAATCTGCTTCTAAGGATGTTGAGCTTGTCGCTAATGGAGGGGTTGCTCAAAAAGTGTTTAACATGAAGAATGCAAGGGGCTGGAAAAATGTGTGGAGTATGTGGGGTTTGA



gi|164347644|gb|EV494957.1|EV494957 sg033E08 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| |||||||.. |||
GAGGTTTCGAAAGGGGTTG

EST sequence (targeted fragment marked with yellow):
CAGACTCCCCCAAAACCTCACCACAAAAGAAATCTCTTCTATTTTTCCCCACTCTACTGCAAAAATGTTTCGATCCGTTGCTAGATCGGCCGCCGGTAAGAGCCTCCTCCGACGAGGATATGCAACCGCCGTACCTGAACGGAAAGTCGCTGTCTTGGGCGCAGCTGGAGGGATCGGCCAACCCTTGGCTCTCCTCATGAAGCTTAACCCTCTTGTTTCTCAACTGGCTCTCTATGATATCGCTAACACTCCCGGTGTTGCCGCTGATGTCAGCCACATCAACTCTAGATCTGAGGTTGCCGGAATATGTAGGTGAAGAGCAGTTGGGGAAAGCTTTGGAGGGATGTGATGTTGTCATCATTCCAGCCGGGGTGCCTAGAAAGCCCGGTATGACTCGTGATGATCTTTTCAACATTAATGCCGGAATCGTCCAGGGTCTATGTTCTGCAATTGCTAAATATTGCCCA



gi|84174784|gb|DR463432.1|DR463432 CM118D04 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
||||||||||||||.. |
AAGGTGTCGAAAGAGTAAG

EST sequence (targeted fragment marked with yellow):
AAATACCCCTCCATGAGTCTTGCCTATGCTGCTGGGAGTGGCTGGAGGCACGATGACAGGAGTTCTTAGTGCAGCGAATGAGAAAGCTGTGGAATTGTTCATAGACGAAAAGATCAGCTATTTGGATATTTTTAAGGTGGTGGAATTAACATGTGAGAAGCACCAGGAAGAATTTGTGGCCACTCCTTCCCTAGAGGAGATTATACATTATGACCTTTGGGCTCGAGACTATGCTGCTAGCATACGGCAATCATCTGGTCTGAGTCCCGTTCTTGCTTAACTGATGGCTTGCACATGTTACAAGACCAAACCAGGCTCTATCTTGAAGACTCGGAAGTTCTCAGTTTATGCCGAAGGCTAGCATTCTTTCAAAGATGCCTAGTATCATGTGTCTCGATATGAAGATATCGATATCATTCCCCCGTTTAGTTGTATAATGTCCAATTTAGAAGTGGCAAATT



gi|164345751|gb|ES832014.1|ES832014 UFL_383_08 Cotton fiber 0-10 day post anthesis Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| |||||| || |||
GAGGTTTCGAAAAAAATTG

EST sequence (targeted fragment marked with yellow):
GGCACGAGTTTTTAACAATGGGTAAAGTAAAATTGTATTTAATTTGATAATATGAACACGTCACTTGAAACGAAACGGAACTTACAATTGCATGGAAAATAATAATAATAATTCAACCCCAAAGTTGAAAGAATATTGAACACATTGAATGGGACTATTCCAAATACAAAGCTGGTACAGGTATCCCCCCTAATAAATATAAGGATAAATGGGAGAACCATAAAAAGTTAAAAAAAGCTTTGGAGGGGTAAGCTAAGAATTCTTGAAAGTTATTGCTTGTGCTTTTCAATGGAGACTATAAACTAAGAGAAATAAAAGCCGGAAGGGAGGCGTTTATGCTTCCCATCCTCTCAGGATAGTTGCACGGGCAACACGGTTCACCCCAAGTGTAAATGCACCCATCCGGAGATTGCAGTCGTGCGACTGGCACATGTTCTTGATGTTATGAAAAGCTTTAGTCATGTATTTCTTCAGCTCCTGGTTCACTTTCTCCTCATCCCACATGAAACCTTGGATGTTCTGAACCCACTCAAAGTAGCTGACAGTCACCCCTCCTGCATTTGCATATATATCGGGTAGTATTATTACTCCTTTCTTTGATAGAATCTCATCTGCTTCTGGATCTGTAGGATGGTTTGCTGCCTCTATTATAAACTTTGCCTTCACATCTGCAGCATTTTCCCTGTTAAGGACTCCACCTAAGGCACACGGGATGAGAACATCACATTCATGTACAAGCAGTTCATTTGGATCCATGGAATCTCCACCATTGAAAGCTTTCAAACTTCCAGTAGCTTCTTTATGCTTTAGCAGTTCTGGTATATCAATTCCGTTTGTGTTCTTAAAAGCGCCAGTTATGTCACTCACAGCAATAAACCTTACAACCCTTCTCATGTATGAGCCTTGATGCCCAGAACCCAACATACCAAA



gi|109867257|gb|DW496233.1|DW496233 GH_TMIRS_004_D08_R Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
||||||| |||.|||.| |
AAGGTGTAGAAGGAATTCG

EST sequence (targeted fragment marked with yellow):
GCTCCCAACGTCTGAACTTTATTTACATTACATGGAATGAAAATAAGTTCAAAGACTCAGAGTTTGAGACACATCAAGCAGCACCCTTATATATAACTTTTATTCTTCTTTTTTTCAAGGCATCTACAGAAAGTAACTCAAGCTCCTAAATAAGCTATTGGTACAAAATTTAGTTATATCAGGCATCACAGCCGACAACAGACATATTGCCTGCCTTTCTCCAACATTATTAAAGCCATAAAGGAGTAGCAAAGACATAAATATAGCATCTTAATACCACCAGGTTAAAACCCTGCTCGTAAGTAGTAAAACAGCCTCATAGGCTTGACTGCAGAGTGCTTAAGGAAGATGTGGAAAAGATTAGACACACACCTCACCATTAGCATTAGCAGCTTCAGGATGGTAATAAAGCATTTCCTTCCACATTATCTCCCTGATCATTTCTTCCCCTAAATCCTCATCTATGTCAAGATCAATTGGCACTTGGGCTGGAGGATTGCAGTTGGGATCGTACAAGGGTGCCATGTAAGGGTGTTGGAGTGCTTCAGTTACACCAATCCTTTTTGAAGGGTCAAAAACTAGCATTTTTTGCAGTAAATCAATTGCCAAAGGATGGGCATTTGGATAAAGACAAGAAAGGGGGATTCCATGGGAATATGGGAGTGATTTAATGTAGTTCCTTGCCTTGGGGGTATCTAAAAATTCAAGATCCTCCTCCTTCTGGCTGC



gi|84152319|gb|DN801674.1|DN801674 G.hir-15-20 DAA bolls drought stressed 829 15-20 DAA bolls from drought stressed plants Gossy

TTCCACAGCTTTCTTGAAC
|||| ||||||| ||||||
AAGGAGTCGAAA-AACTTG

EST sequence (targeted fragment marked with yellow):
GCACGAGGAACACCATCTTTCTTGTGAATTCTGCAACCTTTGGAGTAACTTAAGAAGAAATGGGGGAAAAGAGTTTAATTGCCAAGGATGTCACCGAATTGATCGGTAACACGCCACTGGTATATCTCAACAATGTTGTAGATGGATGTGTGGCTAAAATTGCTGCCAAGTTGGAGGCAATGGAACCCTGCTCCAGTGTCAAGGACAGGATTGGATATAGTATGATTGCAGATGCAGAGGAGAAGGGTCTCATTGTACCAGGCGAGAGTGTGCTGATCGAGCCAACTAGTGGTAATACCGGAATAGGGTTGGCATTCATGGCAGCTGCTAAGGGTTACAGACTCATAATTACGATGCCTTCTTCAATGAGTTTAGAAAGAAGAATGGTCCTCCGAGCTTTTGGAGCTGAGCTGGTTCTTACGGATCCAGCCCGGGGCATGAAGGGGGCTGTTCAAAAAGCTGAGGAAATTATGTCAAGACTCCTATTCTACNTCTCACATTGAAACCTGCAC



gi|109886247|gb|DW515217.1|DW515217 GH_TMIRS_189_D04_F Cotton Normalized Library dT primed Gossypium hirsutum cDNA, mRNA sequenc

TTCCACAGCTTTCTTGAAC
|||||| ||||||| . ||
AAGGTGACGAAAGACTATG

EST sequence (targeted fragment marked with yellow):
AATGCACATGTATCCAGTGGTCAGGCTGTCAATTCCATTGAAAATCAACCACCAGTTAAGATTGAGAAAATTGGAGATTTAACTCCTGTCCAAGATTTTGAAGCCATGATGTCTCAAAGAGATAACCCAGAATGGGTTGAGAAAGCAATCAAGGAATTAAGAGAGAAGATACTTGCTCTATTGGTACACTCCGATGAAGGAGATAAGTATCAGAAAGCAGTGGAATGTGTAGCTGCTCTTCGCAAGGGTTACATCCTTGAGCAAGAGCCAGGACCCTACAATGATTTAATGCACCATATTCGGCAGTATTGCGAGGAGAAAGGAATCAAAAGTTTGCCACAGCTTCTTGCTTCCAGGGATCTCACTTTGATCTCCAAGTCAGAAGCTGAAGACAGCGATGTTACAGCTGAGGAGGCGAGAAGCTTTTTCGTTAAAATGGAGCCAAAACCCGATGTTTAGAGTTGTTACTGCGTCTCTGTTTCTTTTGTAGTTGGCTCTCAGTTTATGTGCAGTAAACTTAACTTCTGTTTGGTTATGAAGTATGAACTGTATATTCAACATGTAAGATCCATGTAGCTTATCTGTTTCCCCTTAAA



gi|84169304|gb|DR457952.1|DR457952 CM060F06 Cotton Lambda Zap Express Library Gossypium hirsutum cDNA, mRNA sequence

TTCCACAGCTTTCTTGAAC
.|||| ||||||||| |||
GAGGTATCGAAAGAA-TTG

EST sequence (targeted fragment marked with yellow):
CTCAAGTTAAGAAAGCTATGGAGGTGACACATTATCTTGGGGGAAAAATATGTATTTTGGGGTGGTCGTGAGGGATACCAAACACTCTTGAACACAGACATGGAAAGAGAGCTTGATCATATGGCAAAATTTCTTGAAGCTGCTGCTGCCTACAAGAAGAAGATTGGATTCAATGGAACTCTACTGATTGAACCTAAGCCTCAAGAACCTACCAAACATCAGTATGACTGGGATGCTGCAACAACACTTAACTTCTTGCATAAATATGGGCTGCTTGGAGAATTCAAACTTAACATTGAGTGTAACCATGCCACACTCTCTGGTCACAGCTGCCATCATGATCTTGAGACTGCAAGAATCAATGGAATGTTAGGAAATATTGATGCAAACACTGGGGATCCTCAAGTTGGTTGGGACACAGATCAGTTCTTGACTGATGTCGGGGAGGCAACCATGATTATGCTAAGTGTGATAAG