| mature miRNA: TTCCACAGCTTTCTTGAAC species: Pinus taeda database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|67963471|gb|DR164435.1|DR164435 RTFE1_48_H09.g1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_48_H09_A029 5', mRNA seque TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGAGTCACACCCTTGCATATTGCAGCAGATAATGGAAACGAGAAAATGATATCTTGCTTGCTTGAGGCAGGGGCTGATCCAGATACTAGAGATGAGGAAGATTTGAAGCCTCTTCAGGTTGCTGCTGCCAAGGAAAATCGTGTCGCTGTAGAAATTTTATTTCCTGTAACTTCTCCTGACCCAGCCGTACCAGATTGGACTGTTGATGGAGTTCTTGCATATGCACAACATCAAACTGCAAAAGCACTGGTGCATGAGGAACTCAATGAGAAGTCAAAAAATATTAAAGAATCAAAGGCAAATATTGTGGAGGTTTCACCGGAGAATAAGCAGAAATCTTTGGAGGCAAAATTGAGAGGAGAGGAGGCATTTAAGAAGAAGGATTATTTAATGGCAGTAGATGCTTACACACAGGCCATTGATTTGGATCCCAATAATGCAATTTTTCTGTCAAATAGAAGTCTTTGCTGGATTAGATTGGGACAAGCTGAACAAGCATTAGCTGATGCAAAGGCTTGCAGAGCACTGCGCCCAGATTGGCCAAAAGCTTGTTACAGAGAAGGAGTGGCACTGCGCCTCCTGCAGCACTTTGATGAAGCTGCAAATGCATTCTATGAAGGAGTGGAGCTTGATCCTGAAAATAAAGAACTTGTTGATGCATTTAGGGAAGCTGTTGAAGCTGGGAGAAAATTTCATGCGACCAAGTAGATTGTAGTTCTTCACTCTTAGGGTTTTTAATGAGGATTTCAAAATCCAAATGTTTATCTTACAAAGTAAATGAGTGAGGCT | |||||||||
gi|11068235|gb|BF186026.1|BF186026 NXCI_132_C06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_132_C06 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGATGTGCAAGCAGCTGTCCCGGTTTCAAATCCTCAGACGGACAGACGTTAGATAAGTAGAGTGTCGCCAAACATACATTCAATCCGAGATCGATTTCTGGGGACCTTTGCAAAGATATTACAGAAAGGGTATTCTATAATGAGGGCAGTAAGAGGGCATTCATCGTCAGTCATAGCAACTGTGTGTGTGGTATTTGCTGCGTGTCTTGCCCTGCTGCTGAGTGATGGGGTGAATGGGCAGCTAAGTTCCGACTGGGTGTCCGAGCTGGGCTCCTCANGGGATGGATGGTTTGATCTCGGGATCGAATCCTCCTCTGCAACCGAAATGTGCGATGAAGAAAGCTGGGGAGAGTGTGNTGCTACNNNNGANNNNNNAAATGAAAATGT | |||||||||
gi|74156470|gb|DT625203.1|DT625203 EST1159478 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMAN03 5' end, TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TGCCTCTGTGCCTCAGGTGCAGGGTGCACTCTCTCTCCTGCTTCTGGTTATGCGATGTGCTCGTATGCTGCCGCTGGTCACATATCCTTCCTGCTCCCTCAAGTCTGCAGTCTATCTCTTGGCTGCTGTTGGGGAGGGTCGCCAATACATGTGCGCCTTCCCCGCCACGTCGTTTTTACACGCGTCAACCCACATGGCTCCGGTACGACACCTGTCCACCGTGGAGCTGGCCGTGTGGGCTATCACCTCGAACCTTTATACACTCCCTTCGCGCCGTTTACATGGTTGGTCTGGGCTCATTTCGACGATGTATGGTTTTCCCTTCGTCTTTCTGCTCGGGGCCGGTAGTTGGGCGAAGCCCCCCGCCGAAGATGGCGCGGCACGGCCCTGTAACCTGCGCGGGTTTTGGTTAGTTGTTGTTTTGGGGGAATGCATAGAATGGTTGACAGGGTTTGTGTTGTTGCACGCAGAGTCGTTTATTCGTGTGCTGGTAACTGTGTTTGATGGAGTTTCTGGGTTTCTGGCTGGGACAGCGGTTCTGCTTTTCTTGTGCGCCTCCGCCTGGATTTCTTGGTCGTTCTGGAATGCAAGTTGTTTAACATGGAATGCCGGTTGTTTAGCATTTCTCTGGTGGTGGTCTTATTCGGCGATTTTGTTGTTCGGGGAGGAGTCGGTCGCCATTCTACTGAGCTTGAGGTGTTGCAGGTGTGGAAAAGGACGTTGCAGGTGTGGAGAAGGTCAGGGAAGCTGTGGGGAGGCCTGTAACCGGCAGGCATATTTATTTGGGATGCAAAGTTGCAGTTCTGATGAGTGGGGGTTGAAGTGACTGCTGTTTTGTACTTCTGGAATAGACCAGTTTGGAAGCCTTTATGGCTCTAGCTGTTTTCTACTTGGGTCAATATGTTTTGCAATATTAAATAGTTAAATACT | |||||||||
gi|58025682|gb|CX712423.1|CX712423 RTPQ1_2_A06.g2_A032 Roots treated with paraquat Pinus taeda cDNA clone RTPQ1_2_A06_A032 5', m TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): ATGAAGTCGAAGACCGTTGCGTCTATCATGCGTCATGTTGCCTCCAAGGTTCCCTCAACTTCGATCGACGGGAACGTAGAGCCACCCCCTGTGGCTCTTGACTCAGAGCAGACAGAAGCTGCCACAAAAGCTGAAGCCGACGAGAAGAATTCAAAAAAGCTGAGGAGGGCGGCTAGGAAGCAAGCCGCCGCAACTGGCACTTTCCCAGAAGGAGAGGATGCAGTTGCCGTCGCCGTTGAGGAAACGGGCGGTCCCACCGGGAGCGTGGGCGAAGAAGAATGCCTAGAGGCTCTTTACGAGCAAATCGCTTGGCCTCTGGGCAAGAAATACGGTCATACGTATGACGCCTTCAAGCTTGCACTAGCCGAACCAGAAACCGTGTTTTCTTCCCTCGCTCAGCCCATCCCAGCCTCTACTCTACCCATCCTCACCGCCACGATCGCCCGTCGCCTGACACCACAGGCGATCAAACTTCGGGCGGATATCGAGCTTACATGCTACACACCTTCCGGCATTGACGCCATCAAAAAGGCTCTCAGGGCCGGGGAGAAGCAAAGCAACGACACCGTCCCAATCAAAGCGAAGCTCGTCGCCCCACCATTGTATGTGTTGAGCACTAATGCCACCGACAAGTTCGCCGCGGTAGATCGACTGGAGAAGGCAATCGAATCGATTCAGAGCGTGATCGAAGACTTGGGCGGATCGCTCGTCATCAAGATGAAACCGAAAGCCATTTCCGAAAGCGAGGAGCAAGACCTTGCTCAGCTGATGGCCAAGGCCGTACAGGAGAATGCCGAAGTTTCTGGGGACGAGGAAGAAGAGGACGAAGGGTTGTGATAGTAGTGTATTAAACGTGAGACACGGATGTCGTCATCTAGAACGTCCATAGCTCTGT | |||||||||
gi|68089088|gb|DR182393.1|DR182393 RTMNUT1_44_F03.g1_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_44_F03_A029 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GTTCCCTGCCAAAATCAAAAGAGTTTATGCCAACATATCCAGCTCGACATGATCATGATAGGCGAATGCGGAGGATTATGAGGAGTCCAGATCCTTTAGAAGAGCAGCGGAGAAAGGAGCTGCGGCAAGGTGAACTAGGTGCTGGCGGGTTATTTTGTTGATATTACCAACGTGGACATTTATGGGAGAAATTGGCATCCACTTTGGCAGGGTGCTGGTTCTGAGGCATACATGGACATCATTCTGATTAAACTGTTCAAGGCCAGATATTATCAGCACTGGGAGTTGGAAAAACTGTCTTCGAGTATCAATAGTTCATAATGTTGATGAGCAAGATTACGAAATCAGATTTGTAAGTGGAGGAAGTCACTCACTTTGGGCTTTTGCTACCAAGTAAAAAATGTTACGGATTTGTTTATTGATTCGTCAGGGCTAATGGTTTTAGAGTGCGTCCTGCATGCAGTTTGCATCGCAAGGTGTGGCATAAGGACTTCCATTGGGGTAACCTCAGTTTCATTTCAAGGTTGTGCATGTAACAAATTTCTTTGGCATATTGTAAGAGATAATCAAATTTTCACCAAAGCTGTGGGAAATGATATGGATGGTTTTTTTTGCAATATGCGCAATTGTTATTTTTTAATCTTGCCTTGTGTGTGCAAGAGAACGCCTGGTGATAAGTGGAGGACAAGTTCTTTGATCTTTATACCACAGAACGGAATGAAGGCAAAATACTGCATACAAGGTAATGATGCTTATTCAGTCTTTCTGGAACCTCCCCAATGAAGTTCCAGATGGTT | |||||||||
gi|67954621|gb|DR160120.1|DR160120 RTFE1_3_G11.g1_A029 Roots minus iron Pinus taeda cDNA clone RTFE1_3_G11_A029 5', mRNA sequenc TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTATTGGGGATTTTTATCTCTGTTCTTTAATACCTGTCTAGTTCTCTATTCTATTCTACTTCATTGCAGTTACGTCTACATTTCCAATTTCAATGGCGGATATCAACGTAGAGAGTGGCGAGGTGGAGACCTTTGCTTTCCAGGCTGAAATTAATCAGCTGTTCAGCCTCATCATCAACACTTTCTACAGCAACAAGGAGATTTTCCTGCGGGAGCTCATCAGCAATTCATCTGATGCGCTGGACAAAATTCGGTTCGAAGCGCTGACGGATAAGAGCAAGCTGGATGCTCAGCCGGAGCTCTTCATCCGGCTTGTTCCCGACAAAGCTAACAAGTGCCTCACAGTTATTGACAGCGGAATAGGCATGACCAAAGCCGATTTGGTGAACAATTTGGGAACGATCGCGAGATCGGGGACAAAAGAATTCATGGAGGCTTTACAAGCAGGGGCGGATGTGAGCATGATCGGTCAGTTCGGTGTGGGTTTCTACTCTGCGTACCTTGTGGCGGAGAAAGTGATTGTCACCAGCAAGCACAATGACGACGAGCAATACATTTGGGAATCTCAAGCTGGGGGATCCTTTACCGTTACGAGAGATGTGAACGGAGAACCTCTGGGAAGGGGCACTAAAATTACCCTGTATCTAAAGGAAGACCAGCTGGAGTACTTGGAGGAGCGGCGGCTGAAGGAATTGGTCAAGAAAGCTGTGGAGAATTCTCCTTTCTTGGAGAGACTGA | |||||||||
gi|74169012|gb|DT638940.1|DT638940 EST1153871 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMHL26 3' end, mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGCCGGGGGGGAAGCGTTTCCATCTCATAGCCATTATTTATACATATCGAGATTAGATGCTGTCTGAAACTAATTGCGCCCTTTGATTCTTGCCTGTACTATTCAATTCGGGATTTCCATCCAAAACCAAATCTGAAAATTCTCTATTAGTAACCGAAACTTCTGATTCTGGTTTCGATTTGTGATCAATCCAGCAGTATGACTTCTGGGAAGAACGGGCTCTTGCCACCTTCCTTTGTTTCTAATTTGCAAAATGTCTTGAAGAACAGAAAGATAGAAAAACCCCCAGAAGAAGAAGAACAAAAACACCAAGAAGAAGAAGCTAAGATCGAGGCTCCAGCCGAAGAGAAGACACGTAATGAAGATTTAGAGAGGAATGAGGATTTAAGGCCCATTGTTCTTGTAACCATTGAGGATGGAATAGAAGCTCCAGGGCTCAAATGCCTTGTCGAAGCTCTTGTCAATGGAGGTCGCTTCAATGTTCATGTCTGCGCTCCCGAATCAGATAAATCTGGAAGCGGGCATTGCTTATCGGTTCGTCAGACGCTGGTTGCAAGCTCTGTTGGCATCAAAGGGGCTACAGCTTATGAGGTTTCTGGTACCCCAGCGGATTGTGTTTCATTAGGTTTATCTGGAGCACTCTTTCCTTGGAAGAAGCCTTCTTTGGTAATTAGTGGAATCAACAAGGGATCAGACTGTGGATATCACATCATTTATTCTGGCGCTGTTGCAGTGCAAGGGAAGCTCTCATGTCACGGGTTCCCTCTATTGCAATATCTTTGAATTGGAAAAAAGATGAGAGCAGCGACAGTGATTTCAAGGAAGCAGTGGAAGTATGTCTGCCTTTAATATATGCTGCAGTAC | |||||||||
gi|66974184|gb|DR050617.1|DR050617 RTBOR1_24_D09.g1_A029 Roots plus added boron Pinus taeda cDNA clone RTBOR1_24_D09_A029 5', mR TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AGCCGTAAGGAGCAGCAGAGCGACCTCAGGCTTTCGCAGCTCGGGGAGCTCTCACCGTCCTCTATTCAGCGGAGAGCGGCCGAGGTCGGCGCGGCCGTCGACCATGCCATGCAGGCGGGCCCGGTTCCTGCTCAGACCCTGAGGGAAATAAACCAAGAAAATGATATGAAGAACGCCTTGAGTTCAAAATTGAGCGAGGGCAATAATTTCAAGATCGAAGCAAAAAATAATATGAGGCAGCAGGGCTTGAGTTCGAAATCGAGTGACAATATTTTCAAGTTTGACGAAAAAAATAATACGATGCTGCAGGGCTTGAGTTCGAAACCGAGCGACAATATTTTCAAGTTTGAGGAAAAAAATAATACAAGGCTGCAGGGGTTGAATTTGAAACCAAGCGAGTGCGATATTTTCCCGTTCGAAGAAAAGAGTAATAAGAAGCTGCCGGGTTTCATTTCGAGGTCGATTAAAAAGAGCGACGTTTGCAAGGTTGAAGGTATGACAGAGGAGGCCGATGAGGAGAAATCTGACCAGATGCGACTGAATTTGAGGGAGCGCGACTGGTTTAAGATTAAAGATCCTGTTTCTGGCATCGGAACGGCTTTAAATTTAGGGCAGTTCGCAATACATAACGTCCAAGGTATTGCAGACCATGGCGGAGAGCATACGACGTTAGGGTTGTCTGTGTACAGACCCGAGAAGCGAGTCTGAAAATTCTGGAAGCCGTGGAATTGCTAGAGAAAAAAGTTTTAGAATTCTGTTAGCCGTGGAATCGCTGGAGAAAATAGTGAGGATCCTGGAAGCTGTGGAATTGCCGGAGAAATGAATCTA | |||||||||
gi|8179244|gb|AW984894.1|AW984894 NXNV_100_D05_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV_100_D05 5' similar t TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AAGATACTTGCTGTGCTGGAGACAAACATCCTGTGGGTGAATCCAGATTGTGGTTTGAAAACCNNNAAGTATGATGAAGTTGTTCCTGCATTGACAAACATGGTTGCATCTGCCAAGTTGCTGCGAAGTGAGCTTGCCTCTGCAAAATGATCAAGAAAACAATTTAACATCAGCATTTTAGTGCAATAAAGATGTGGAGNNNTAATTTTGGATTTCTTATGTGAAGGGGTCAGTTGATCTATTGTTTAGAAGTATATCAGTGGAAGTTCAACATAACNAGCANNNNTCATTC | |||||||||
gi|51900963|gb|CV138644.1|CV138644 EST849853 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIB561 5' end, m TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): ATTGTGTATGCGCTCGTGGTCCAACGGGGAGGAGGCTTGCTACATCGATGGTGTGGCCTATCTAGAAGAAGGATTTCGAGGTGGAACGCTTCGACCCCCCTCCTTTGCGTGGAGGTGGCCGTAGGGGAAAATTATTCATCGTCCGGTCGGTAAAGCTGTGGGAAATCTCCTAGGTTGCCTGTACGTAGGGTGCGTGGGGTGCGGAGCTGCCCGGTCCGTCCTCCTGTTTGGATATGTTCTTGTATTGCGTAGCGAGCCTCTTGATTTGCATTTATTTCCTTCCTTTGCCTTCGCATCGTGGTTGCCGCAGGCGGTCGAGTGATCGAGGTCCACCGTTGCTGCTGTCCGGGTGGACTCCTAGGTGGCCTCGGTGCGCGGCGGGGAGGGCCGGGGGGCATTTCTAAGAGAGGTTGTGGGCTCGGTTGCTCTTGTTTTGTTTCCTTCCGTTTCCTTTGCATTGAGGCTGCTGCAGGCGATCATGCGATCGAGGTCCATCGTTGCTGCTGTCCGGGTGGACTCCTAGGTGGCCTCCGTGCGGGGAGGGGAGGGTTGGGGGCATGTGTTGTTTCAATTGTGTATGCGCTCGTGGTCCAATGGGGAGGAGGCTT | |||||||||
gi|5423637|gb|AI812313.1|AI812313 10G1 Pine Lambda Zap Xylem library Pinus taeda cDNA, mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGGAGCTTTTGACAAATGCATCAGAGCTCTTTTTCCCATCCCCTATCTAGGCGGAGCCCGAGATTGTTATGTCCGTAGGATAACCCATTGCGCAGGGATGGGTAGCTACGTTGGCATTGCGGGGGCGCCTGGAGCGACCATGGCTTTGCCACAGAGCTTCATCCTCAATTTTTCTTCTCTCACGGACCACGACGATGATTACAGAGAGCTCATCAGAGCGGCGTCTCAAAAGGGTAGAGCAACGACAACAAGGTTGTCTGATCATCAGCCCTTCCCCCCGAGTTTCAGCACCTCTACTGATCGTAGTCGTGGTCGTCATTCGATTGATGTGGGGAGAATTGACGAAGAGAGCCCTTGTTATTTCTCTCGATCTTTCAAGAAGACTGCAGACGAAGAGCTTCGCTTTCCACGGAGCAGAAGCTGTAGCTCTGTCGCGAAATTGAATCACTATGAAAAGAAACAGATTTTCAGAGTGTAGGCTTTCACAGTTAGAATTTCTATATGTTAGGTTCTCCTTACTGTTTTCCGGAAAACTGTGGAATGTTTCTGAAATCTATTAAATTCTCTCTAAAATCCCAATATTTCACCTATATGATAATTTTATTTC | |||||||||
gi|18613511|gb|BM492580.1|BM492580 NXRV_028_D02_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV_028_D02 5' sim TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CCAGTATGGATCAGGATGTACTCGCTTCCAGCGGAGTACTGGGATGAAGATTCACTGAAAGACATAGGAAATGGGTTGGGGGAGTTCGTCAAAGCGGTGGAAGAGACTAAGTTGCGCAGATACACCTCCTATGCCCATATCTGTGTCTTCATGTGGCTAGACAAACCCCTCCCGGACTCGGTAAGTCTTTTACATGATGATTTTAAATGGGTGCAACCTTTGGACTATGAACATGTCCCTTTCCGCTGTCGAAGATGCCATGCTCTGGGGCATCTCTTCAGAGATTGTCCTCTAAATTCCAAAGCCCAAAACTCTGANNNNTCAACAGAGCCAGANNNAGATGGCTTCATAAAAGTTGCCAACCGTAAAAGACCTCACAAGAAACCCCCCACTGGGAAAAAGCCCTTGCAGACCCCCTCCTCCNNTNCTTCAACTAGTAATAGCTTTGAAATCCTTGNNNNCCCCTCAGANNGANNACCTCTGCATGCATCATTCAACCCCAAGGCCCCTTCCTCCTCTGNNNNCCCTCAT | |||||||||
gi|66739370|gb|DR017000.1|DR017000 STRS1_13_A10.g1_A034 Shoot tip pitch canker susceptible Pinus taeda cDNA clone STRS1_13_A10_A TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GATAATATTGACACAGGCAAAAACTGGACCTTATGTCCAACAATGTTGTTGAAATAAGGATGACATTGTAAAAAATGCCCAAAAAGGTTTTAAAATGTTGATAATATATAAGCCTAGCAGCTAAGACGTCATAAAGAATTGTGTAAATTCAAGAAAGTCAAAAGTCATCTGAACCACTCAAGCACCTCACACAGTCCCCAGTTAGACAATAGCATTTGCAGCACTAGCAATTCTGGGCCATAGATCAGCACACTCCTTGCCAATAGGTAAATACCTGCTACAAACTGGTAAGGCTGTGACTGAAGAGGAAAAGGACCAAGACCCAGCGAACCATCTCATGTGGAAGATGTCCATGGATGGAGAGTATAAGGAAGCTGTTGAGTTGTTATTTGAACTCAAAAATTGTGGGCTAAGACCCAAGATTCACAGCTATGTTACTGCTTCAGTCACGCTTGTGATGGAGCAAATCCAGTTTACAAGGGCTGTACATGAGCTCAAGGCCTTTAGGAATAAAGGAGAGGTGGCTGAACTTGAGACAGGTGATGTAGAACTCCTAAACGTCTATCAAAGAAATCTTCATGAAAAAGGGGAACAGATTGTGAAGTGGGCAAT | |||||||||
gi|21824692|gb|BQ699376.1|BQ699376 NXRV126_H11_F NXRV (Nsf Xylem Root wood Vertical) Pinus taeda cDNA clone NXRV126_H11 5', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AGTGAGCTTGCCTCTGCAAAATAATCAAGAAAAACAATTTAACATCAGCATTTTAGTGCAATAAAGATGTGGAGGAATAATTTTGGATTTCTTATGTGAAGGGGTCAGTTGATCTATTGTTTAGAAGTATATCAGTGGAAGTTCAACATAACTAGCAGGTTTCATTTCTCAGNNNAAAATCATATGGCTGTACCTGAGAATCACCTAAGTGCACATCACGAAGATTGAGCCCACTCTGGCCAAAAATGTAGAGTTTCTGCAATCTTTTAAAGAGAACAAGAAAAAAGTAAACCAAAAAATCAACTAGTTTTTAAGAAATTTGCAGAGTTGTTTATTGACCACGCTGGTCATCTTTCTAAATATTTCAGTAGACATTTTTATTCCGGCTATTACAAAAACGTCGTGCGGATGGAAAATGTCTACCTAAAGTTGTTATGACAGAGTTTCTCATTTCTGCAGGCCTGTTGTGCCTACAATTGATATAAAAATTTTCAGCGTAGTTTCTGAGTC | |||||||||
gi|66741099|gb|DR018729.1|DR018729 STRS1_25_G08.b1_A034 Shoot tip pitch canker susceptible Pinus taeda cDNA clone STRS1_25_G08_A TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTCGAAGTTTGGGAACGTTATTGTCATGAGAATCGTAGCGAATATGAACTTCCATGAAAGGGATTCTGCATGTTCCCTCCTCGGCCAAACCACAATGGTTGTTCTCTTGATCATCACTACTCTTCATGCAGGGATTTGCAAGGCACAGCTAACCATGTGCAACCACAACGTTAACTATACAAAAGGCAGTAGGGTGGAGAGCAATCTGAATACAGTCTTGAATTCTCTGGTTCAGCACACGTCCCAAACAGGGTTTAATACTTCTGAGCATGGCCAAGGTAGCGACCAAATATATGGCCTTCTGCAATGTAGGGGAGACACAACAGCGGATCGATGCTATAATTGTTCACAGAGAGCAAGGAGTACTGTTCAACAAAGTTGTGGAAATGCCGTTGGGGGTAGGATCTGGATGGATGTCTGCTTCTTGCGCTACGAAAATTACAGTTTCTTGGGAAAACTGGACTCTTTTGGAATGTATACTTACATTACTTCCAATGTCTCGAACTCTGATGCCTTTGACGCTGCTCTTGAGAGGCTGTTCAGAAAATTATCGGCTGAAGCAGCAGCCTCTGGATCTGAATTATATGCCTCTGGAATAATTACGGACTCCTTGTCTCGAAAGATTTATGGCCTGGTTCAGTGCTGGAGAGATATATCTAGCAATGACTGCACAACATGTTTGTCAGATACCCTCAATTCTATGTTAGCAACTTATCCTGGAAATCCAGGAGTGCAGGGTTTGATGGCAAACTGTATTGTTCGTTATGAGATATATCCTTTCTTTAATTCCACTGCTCTGCCACCATCGCCAAGTTCCCCAGCG | |||||||||
gi|67687715|gb|DR112905.1|DR112905 RTS1_31_B07.g1_A029 Roots minus sulfur Pinus taeda cDNA clone RTS1_31_B07_A029 5', mRNA seque TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AATGGTGATAAGTAATCATGTTCCGGACCTGGAAGTGATTGGCAGGGTCGCCGAGGTTGCAGATTTAGCGTGGAATGCTATTGAACGTCACCATGAACACAAGGAATCTGTTACATTCCATGAGCGGTGTTTAAAACTGGAGGAAGAATTGGCCCTTCAGAGGTCGGAAAACGAGAGGCTGAAGGCAGAATTGGAGGAATTTTGTAAAAATGTCCAGGATTTCCAGAAATTGCATAACTCTTCTCAAAGCAGCTGTGGGGACGCCCTTGCAGCTGGTTGCCCATATGCCGAGTTGGAAAATTGCCCTTCAGATCTGTATGAGCGGCTAAGGAACACTGTAGACTCCCCGAACTTTCTAGCAAAATTACAGACTTCTCATGATAATGGAAATGCTACATCCAAAGATCTAGCAAAATTAAAGACTTCTCATGATAATGGAAATGCCACATCCAAAGATCCAGCAAACTTGGGGATTGAAGGGGATATACTGGGGAATAATAACCCTGAAGACCCAAGCTTGTGGGTTTGGGTTCCAGATGACATGGCTACGAGAAAAGTTGAAGAAAGATGTGGATTGGACGATGAAGGATATTATCATTATTACTGAAGAAGATTTAGTAGATGGCATTGCCACATTCATAGCGAACTATATTGTATCCAACTCGCAG | |||||||||
gi|67551494|gb|DR092521.1|DR092521 STRR1_1_H04.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_1_H04_A033 5', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): ACTTGTGGATCACATTAAATTTGACCATGGATATACAGCTAAGAGTCATCCTATTGTCAATCTTCTTCAAATCATGGGGGAGTTTAGTCCTGAACAGCAACGTGCATTTTGTCGTTTTGTGACTGGTGCTCCGAGACTTCCTCCTGGTGGTCTTGCTGTTCTAAATCCGAAGTTGACAATAGTTCGAAAGCACCCAACAGTAGTGAATGGAGGGGCGAATGGATCTGCTTCTGCTGAAGCTGCTGATGGAGACTTGCCCAGTGTCATGACATGTGCCAATTACCTTAAGCTTCCACCCTATTCTAGCAAGGAAGTGATGCGAGCTAGATTACTTTATGCAATAAGCGAAGGACAAGGTTCATTTGACCTCTCTTGAGGTTGTTTTGTCAGCATAACTTACACATTAGCTTCCAAAAAAATAGCTATCGCAAGATGTGCCTGTCTCTGTATAGTTGACCCATAGATGTCACGTCTGTGACATCCTGAGACGAGCATGTTGCGAATCTAGCTATTTGGTCCTTCAAATAGGATGGAGACGATAAACATGTTTCACAGGGCCCCTTGAACCATAGAATCATCGTGAAAAGATTGGTTCTGTGGTCTTGCAAGCTTTGCTAAAAGTAAATTCTTGTTCCTTGCAGTTTCTGTTCTACAGCAGAGTAACAATTCAGCCCGGTATTTATGGCTGTTTCTTGGTTGGCATCATTTGTATATTTTCATGCACTTCCATCTGTGGACTTCGTTCCACGTGGTTTTACAAATGGAAATTGGAATTGCCATTGTTAGAATGGCTTCACTTCTGAATACCTACATGTGCATTCTTTATGATTTTTCAATCTATAATTGATTGGGGAAGCTGTGGAGATACACATATATTTCCTG | |||||||||
gi|67705592|gb|DR117282.1|DR117282 RTMG1_6_B10.b1_A029 Roots minus magnesium Pinus taeda cDNA clone RTMG1_6_B10_A029 3', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GATTCGTGTTCGTTCAACGAAATTTTGGAAGGGTTCTGTTTCTGCTTGGCTAACACGAAATGGCTACTGCAGTTTCTGCAAAGAGTAATGTCTTGAAATCGATAGTTCCAGCCGTCAAGAAATGCCTGTTGCCTTCGGCCCGTCCAGGGGATTCCGCTCCCTCTGTAATGTGCCGGGGCTTGTCAACGGCGGCAGTGAAATACAGGCCCGAGGACGATTCGTCGATTCAGGATGACAGAGAAAGGCGTCAGGCTCCGGAAATCCGCCGCGGGGGCTGGCCTAATATTCTTGAGGATTCGTTTTTTCCTCTGAGGAACTTGGGATTTGGCCTCGATCAGCTGTTCGATAACCCTTTCCTCGCGGCTTCTCGCGGGACAGGGGATGTGATCAGAGGTGGGCCGAGAAAGCTGTGGGAAGCTGTTGAAGATAAAGAAGCTCTGTATCTGCGGGTGGATATGCCAGGCCTAGGGAAGGAAGAAATCAAGGTTTATGCTGAGGAAAATGCCCTGGTGATAAAAGGGGAATCCCTCTCAGAGGCAGATTTGGACGGCAGTAAACAGAAATACAGTAGCCGCATCGAACTTCCCCCAAAAGTGTACAAGCTGGATCAAATCAAAGCGCAGATGAAGAATGGCGTGCTTAAGGTCACTGTCCCCAAGTTTACAGAAGAGGAGATCAAGAACGTGATTAATGTGAAGATCGAGTAGAGGTTTTCACAGTAGCGTTTTTGAATTCGAACACTGAAGCGCGGTAGTGTTTTTTCTTCGGTTCTTGGTCATTTTGCTTTGATAGGAGGGCCATAACGAGTGTCTATGAAATATAATAAAATGCTGAGAAGATGTAATTTGGAGTTCAGGACAGTTTGAATGTTATCAGTCAATTTTGCTTTGCTGGAAAAGTCATGGTA | |||||||||
gi|48932257|gb|CO161716.1|CO161716 FLD1_30_E07.g1_A029 Root flooded Pinus taeda cDNA clone FLD1_30_E07_A029 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGCAGTTTTAGGGGCCAAGGAGAGCAGTGCCAGAAAGCGGTGGAAGAAACGGTGGCGAACTTTCTTATACTGGAGGAAGCTCTGCGAACGAACCTCTGTTTCTCAGGAAAAGCGTATTTCGGAGGAGATGGGATCGGTTTTCTTGACATCGAATTGGGTGGTCTGCTCGCATTTCTGAAAGCCCTGGAGAAAGGTACTGATTCAGTTTTGATAGACGCGGAGAAGATGCCGCTGTTAAGCGCATGGATGGATCGATTCTGTGAGGCCGATGGAGTGAAAGATGTTATGCCGGATCCGGTCAAGCTGCTGGAATTTATATGCGCCACGAGAGTTAAATTTGCGTCCCTACCTGCTGCCAATTAGGGGAAGGCATTCGGCCATTAAATTTAGATAGATTCTCAAGAGAAGGCTGTATTCAATTGGATATAATCCTCCACATCGTTTCTAATTTTATGTTGTCAGTTTGATTGATTGTAGGTTTTTTGAATCTTTTTCTTTCAGTTTTCACTTTCTTCCATGTACTTTGACTTCATGGGGAAGGCAAAATTACAGAAATGCCGTCTGATGAACTTTCCTAAAAATATTGCTCCCTTCATGAAGATTAAAGTGTTGCCTAGTGTTTGGTATTCCATCTCCATCACTCACTCATCATCATGACTAGTTATTCCACTTTGACAAAATAGAGCAATACTATTATTATGTTGTTTTCTAAATATAATCACTCATCATCATTACTAGTTAAAAAAAAAAAAA | |||||||||
gi|49451428|gb|CO370111.1|CO370111 RTK1_65_C08.g1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_65_C08_A029 5', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): ATTATATTGTTCGAATCCGCCAGAGACAAAGCAGCCGAGCAGTATCTGCGTTCGCCTCTTGACGCCGATAATTTAATACGATGGGGTGGAGTACTGCTTGAACTTGCCCACTTTTATAAAGGACAAGCATCGGTTAACATGCTTCAAGATGCTGTGTCCAAGTTTGAGGAAGCTCTGAAAATTAATCCAAAAGAACATTATGCTTTATGGTGTTTGGGAAATGCTTTTACAGCTCAAACCTTCCTTTTATTTGACACGGGGAAGGTGAATGTGAACTTCAGGAAAGCTGTAGAGTGTTATCAAAAGGCTCTAGATGAGGACCCTCACAATGAGCATTATTTGAAGGCTTTGGAGATGGCAAAGAAGGCACCTTCTCTTCACAAGGAGATATTGAAACAACTGACTTCTGAAGAGGTTGTAGTGAATGAAGAAATGAATATTGAAGGAAGTTCCTCACAGGCTACAAGGAAAAAGAAAAACAGTGATTTCAAGTATGATATGCTTGGTTGGGTTGCGTTAACAGTTGGAATAATTGCATGGGCTGGATTGGCCAGGTCAGCATTACAGTTGCATCTAGTATCCTCAGCATATACATGAGGGCATATTCATGTGACATAGCGTTTCTTTTGGCCGAGAATTGGCATACCAGCACTTAGTGTACATAATTGTATATATGAATTTGTAGACATCAGATTGAGAAATTTCTCTAACAATTTACACAGTTAGAAAAGAGGATCGGTAGCATGGATATGGATGCTAC | |||||||||
gi|70773522|gb|DR685046.1|DR685046 EST1075123 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAAZ49 3' end, mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGCGAAAGAAAAAAAATGGTGATAAGTAATCATGTTCCGGACCTGGAAGTGATTGGCAGGGTCGCCGAGGTTGCAGATTTAGCGTGGAATGCTATTGAACGTCACCATGAACACAAGGAATCTGTTACATTCCATGAGCGGTGTTTAAAACTGGAGGAAGAATTGGCCCTTCAGAGGTCGGAAAACGAGAGGCTGAAGGCAGAATTGGAGGAATTTTGTAAAAATGTCCAGGATTTCCAGAAATTGCATAACTCTTCTCAAAGCAGCTGTGGGGACGCCCTTGCAGCTGGTTGCCCATATGCCGAGTTGGAAGATTGCCCTTCAGATCTGTATGAGCGGCTAAGGAACACTGTAGACTCCCCGAACTTTCTAGCAAAATTACAGACTTCTCATGATAATGGAAATGCTACATCCAAAGATCTAGCAAAATTAAAGACTTCTCATGATAATGGAAATGCCACATCCAAAGATCCAGCAAACTTGGGGATTGAAGGGGATATACTGGGGAATAATAACCCTGAAGACCCAAGCTTGTGGGTTTGGGTTCCAGATGACATGGCTACGAGAAAAGTTGAAGAAAGATGTGGATTGGACGATGAAGGATATATCATTATTACTGAAGAAGATTTAGTAGATGGCATTGCCACATTCATAGCGAACTATATTGTATCCAACTCGCAGGCAAAGAAAATGACTCCAGAACAGCTGCAGAAAGTTCTTTCTAATGTCTTGGAAAGCATGTATAGAAGAAATACAATTAAGAAATTGTGGGATGCTTCCAAGTTTATGTACACTGGGAGCAACATGGGGAATTACTCTCATTGGA | |||||||||
gi|74168399|gb|DT638327.1|DT638327 EST1153258 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMHD74 3' end, mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGCCGGGGATCTCCATGCATGCTCTACGATATACATTGCCTGAAAGTTTTTCGAGCTTCGCTGACTCTGCTTAACTACGGAAGTCCTGTTATTTGAGGTGCTTGCAACAATGAAAATGACAAGGTTTCTGCTTCTCTCTTTCTTCTGCCTTTTATCCCTAGGCCTTGCCACGGATGAAATTGTAGCTGACATCACTTGTCAGGCTGAGGCTGGATTGCAATCTGAATTCAGCATTTCCCATGAGTGGGAAGGCGAGTTTTTTCCTGGGATTCCAAAGATAAACTATGAGGGTCCGTTGAGTAAGAACCCTCTGGCATATAAGTGGTATAATGCAGAAGAAGAGATTCTTGGAAAGAAAATGAAGGATTGGTTGAGATTTAGTGTTGCTTTCTGGCACACATTCCGTGGGACCGGTGCTGATCCATTTGGAGCTCCAACAAAGAGCTGGCCATGGGAAGATGGCACAAACTCATTGGCTATGGCTCTACGCAGAATGAGAGCAAATTTTGAGTTTCTCAAGAAGTTAGGAGTTGAGAGGTGGTGCTTTCATGACCGGGATATTGCTCCTGATGGAAGAACACTTGCAGAATCAAATGCCAATCTAGATGCTGTTGTTGCTCTTGCCAAGCAGCTTCAGGAAGGAACTGAAATTCGTCCTCTGTGGGGAACTGCCCAGTTGTTTATGCATCCCCGCTACATGCATGGAGCTGCTACAAGTCCAGATATGCATGTTTATGCATATGCTGCAGCTCAAGTCAAGAAAGCTATGGAGTGACAAATGAACTAGGGGAGA | |||||||||
gi|51908536|gb|CV146209.1|CV146209 EST857418 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIDT76 5' end, m TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GCGGAGAGCGGCCGAGGTCGGCGCGGCCGTCGACCATGCCATGCAGGCGGGCCCGGTTCCTGCTCAGACCCTGAGGGAAATAAACCAAGAAAATGATATGAAGAACGCCTTGAGTTCAAAATTGAGCGAGGGCAATAATTTCAAGATCGAAGCAAAAAATAATATGAGGCAGCAGGGCTTGAGTTCGAAATCGAGTGACAATATTTTCAAGTTTGACGAAAAAAATAATACGATGCTGCAGGGCTTGAGTTCGAAACCGAGCGACAATATTTTCAAGTTTGAGGAAAAAAATAATACAAGGCTGCAGGGGTTGAATTTGAAACCAAGCGAGTGCGATATTTTCCCGTTCGAAGAAAAGAGTAATAAGAAGCTGCCGGGTTTCATTTCGAGGTCGATTAAAAAGAGCGACGTTTGCAAGGTTGAAGGTATGACAGAGGAGGCCGATGAGGAGAAATCTGACCAGATGCGACTGAATTTGAGGGAGCGCGACTGGTTTAAGATTAAAGATCCTGTTTCTGGCATCGGAACGGCTTTAAATTTAGGGCAGTTCGCAATACATAACGTCCAAGGTATTGCAGACCATGGCGGAGAGCATACGACGTTAGGGTTGTCTGTGTACAGACCCGAGAAGCGAGTCTGAAAATTCTGGAAGCCGTGGAATTGCTAGAGAAAAAAGTTTTAGAATTCTGTTAGCCGTGGAATCGCTGGAGAAAATAGTGAGGATCCTGGAAGCTGTGGAATTGCCGGAGAAATGAATCTAG | |||||||||
gi|49446968|gb|CO365651.1|CO365651 RTK1_18_H05.b1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_18_H05_A029 3', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTCTTGGTCCTTTGTAGAGATGATCAGCCCAGGTCAGAAACCAGCATGCAAATTGCACTAGCTATCAAAGAGGAGGTTGAAGATTTGGAGGCAGCTGGTATTCAGGTGATCCAAATCGATGAGGCAGCCCTGAGAGAAGGACTACCTTTGCGTAAGGCAGAACAGGCTCACTACCTGGAATGGGCTGTTCATGGTTTCCGTATCACCAACTGTGGTGTAAAGGATACTACTCAGATCCATACCCACATGTGTTACTCCAACTTCAACGACATTATTCATTCCATTATTAATATGGATGCCGATGTCATTACCATTGAGAATTCCCGCTCCGATGAGAAATTATTGAGAGTTTTCCAGGAGGGCGTGAAATATGGGGCTGGAATCGGTCCTGGGGTTTATGATATACACTCTCCTCGCATTCCAGACACGGAAGAAATCGCAGACCGTATCCGCAAGATACTTGCTGTGCTGGAGACAAACATCCTGTGGGTAAATCCAGATTGTGGTTTGAAAACCAGGAAGTATGATGAAGTTGTTCCTGCATTGACAAACATGGTTGCATCTGCCAAGTTGCTGCGAAGTGAGCTTGCCTCTGCAAAATGATCAAGAAAACAATTTAACATCAGCATTTTAGTGCAATAAAGATGTGGAGGAATAATTTTGGATTGCTTATGTGAAGGGGTCAGTTGATCTATCGTTTAGAAGTATATCAGTGGAAGTTCAACATAACTAGCAGGTTTCATTCTCAGTGCAAATCATATGGCTGTACCTGAGAATCACCTAAGTGCACATCACGAAGATTGAGCCCACTCTGGCCAAAAATGTAGAGTTTCTGCAATTTTTTTAGAGCGAACAAGAAAAAAGTAAACCAAAAAATCAACTAGTTTTTA | |||||||||
gi|5903674|gb|AW043145.1|AW043145 ST29H07 Pine TriplEx shoot tip library Pinus taeda cDNA clone ST29H07, mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TATGGCNAGGGGGCGACCGAGGGAGAAAAGGGGCAGGTAAAGCTGTTAGGTGTGATACTGAGTCCCTTCATTGTGCGGGTCCGAATAGCACTTGCTCTTAAAGGTGTCGATTACGAGTTCGTCGAAGAGAATCTCAAAGCTAAGAGCGAGCTGCTGGTTAAATCAAACCCTGTTCACAAGAAAATTCCAGTTCTTATCCACAATGGAAAGCCTGTTTGTGAATCCATGATTATTGTACAATACATTGAAGAGGCATAGGGAAATAAGGCACCCAATCTTATGCCCAGAGATTCATATGACCGAGGGATTGATCGTTTCTGGGCTGCCTTTGTTGACGATANTCTCTTTCCCTGTCTGCGAGGAGTTTTCACTGGCCATGGCGACCGGNTACAGAAAGCTGTGGAAGATAGCGTTACAAAGGTTCTTTTGATAGAGGAAGTGCTGCGAACCAACCACTGCTTCGCAGGAAAACCGTATTTTGGAGGGGATCAGATNGGTTTGNGTTNNCATCCCCCTTGGCGG | |||||||||
gi|34354773|gb|CF396356.1|CF396356 RTDS2_21_B12.g1_A021 Drought-stressed loblolly pine roots DS2 Pinus taeda cDNA clone RTDS2_21 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GTGGCAGCAAGTTCAAGAGAATTTGTGTGTTTTGTGGGAGTCGATCAGGCTACAAGGCACTTTTCAGCGAGGCCGCCCTTGATCTTGGGAAGGAATTGGTGGGGCGAAAAATTGACCTGGTCTATGGTGGGGGGAGCGTGGGGCTCATGGGATTGATCTCTCGGACTGTTCATGATGGTGGCTGCCATGTTCTTGGATATCTGGGGAGACAGTTGGTGAAGTGAAAATTGTTGTAGACATGCACGAGAGGAAGGCAGAAATGGCACGTCAAGCAGATGCTTTCATTGCTCTACCAGGTGGTTATGGAACAATGGAAGAGCTCTTAGAGATTATCGCATGGTCACAGCTTGGCATTCATGAGAAGCCGGAAATGTCCAACGTTTTGGTTAGGTGGTCACTTCACCATCATCAGGGACTTAAGAAGCTGTATAGTGACGTTCTTAAGAAGCTGTATAATGACGTTGGACGTTTCCTGCAAATTCACACAATTCATATCGGAAATAATATTCCATAATCAAAGACTAATTCCAAGCTGAATGCCTATTGCATGCTTAAAGGAACTTATAAGCAGAATGGCATCCTATGTACTTGATGAAAATAGTAGCTTGGATTTGTTTTCTAGGTGGGTCTCCTGAATGTTGATGGATACTACAATTCCTTGCTTGCCTTGTTCGATAAAGGTGTGGA | |||||||||
gi|68083851|gb|DR177496.1|DR177496 RTMNUT1_5_D11.g1_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_5_D11_A029 5' TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CTTTACTTGAAGAGACTGAGCGGTTCGATTCCGGCACCATATCCAGTGGCTTCGTTCCAGGCTGCTGAGGGCGGCAAATCCGGTGGGAGAATGCATATACAACCTCCTGCAAAGAGTGGAGCCTCATCACCTGTATTAACCAAGGGCTTAAATTTGGGTTTTGCTACGAGCCCAAACAGTACAGGCAGTTTTGGAATTGGTGGAATCGACCAAGGCACTCTGAAATCACTGGAGCAGTACAGAGCTTACGAGCAGAAACGGGCAGCTAATCGAGCTCAGGTGTTGGGAGGGATTGGTATCATGCCTAGTAAACAATCAAGTGTTGGTCAATTACCAGCTGAATCGAAAGGTGGTCTCCAGCGAATGGCTTCTGTTGATCTAAGTCTGCTATGGAAAGCTCAACGGGATCAAGCTTCCAACCAAAAACCTGCCGGGTTGAACATCGGAGACGATTTAGCAGATCAGAGTATCAAGAAAGCTGTGAAGCTCGAGAATGTTCAACTGGAGCCGTTCACTGTACAACCAACTTCCAAACATTCGAGGGCACACAGCATGAGCAATGTCTTGACGGATTTCTGTAACATTGATCCGCCTCTAACAGGTTTCCAAAGGTCAGGCATGCTCAAAGAGATCAATGAACTACAGCCAATGGAGGGCATCTCATGGGAGGGAAGCACAAGCGCCAAGGGTGAATTTAGGCCAGTGGAAGAAATGTCATGGAAAGGAAGCACAAGCACTGGGGGTGCTGGTGCTGAAGTTGGGGT | |||||||||
gi|5903338|gb|AW042809.1|AW042809 ST25F07 Pine TriplEx shoot tip library Pinus taeda cDNA clone ST25F07, mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TGGCCGGGGGACTCAGGCACGGACGATTCGACTGTTCCAAGGTTAAGCAAGACGCTAAGATAGTGTGAGGAGAAAATTTATCATGGCGGGTATCAAGCAAGTCAGAACAAGGTTGTCGTGTTAGTTGGAGCAGTTGCCATTTTTCTGGTGTGTATGGAGATGACGGTAATACAAGCAGAATCTGTTGGAGTAAGTTGTGGGACTGTCACCTCGGATCTGGCTCCGTGTGTTGGATATCTCACGTCCGGGACAGGGAAACCAACCCCCGGTTGCTGCGGCGGAGTGAAGAAGTTGGCAGGTCTCGCCAACACCACCCCTGCAAGGCGGGCAGTGTGCAGTTGCCTGAAGAGTGCGTATACCCAGTTCCCCAACGTTAAATCAGCTGCTGTCACTGGTCTCCCGGGCTCCTGCGGTGTTAATCCTCCCTTCAAAATTTCTCTGCANANCAACTGNAACACGATAATTNAAAAGGNTCCCCGGTAATTTTCCACTGGCCCAATCAATNTGCANNCTAGTTCAACTTTAAAGNGGGGCCAAATAAGGAAGGTAANACCTCCCCAAGTANGGGGATTGCCCCCCGGCCCAAGNAAATTG | |||||||||
gi|9689911|gb|BE496513.1|BE496513 NXCI_020_A06_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_020_A06 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGATGTGCAAGCAGCTGTCCCGGTTTCAAATCCTCAGACGGACAGACGTTAGATAAGTAGAGTGTCGCCAAACATACATTCAATCCGAGATCGATTTCTGGGGACCTTTGCAAAGATATTACAGAAAGGGTATTCTATAATGAGGGCAGTAAGAGGGCATTCATCGTCAGTCATAGCAACTGTGTGTGTGGTATTTGCTGCGTGTCTTGCCCTGCTGCTGAGTGATGGGGTGAATGGGCAGCTAAGTTCCGACTGGGTGTCCGAGCTGGGCTCCTCAAGGGATGGATGGTTTGATCTCGGGATCGAATCCTCCTCTGCAACCGAAATGTGCGATGAAGAAAGCTGGGGAGAGTGTGGTGCTACTGTTGATGAGGAAAATGAAAATGTAGNCCATGGGAGGCTTTTGAGNCGAATCCGATACTACATCAGTTATGGGGCCTTAGCCGCGGATCGAATCCCGTGCCCTCCACGGTCTGGGAGATCGTATTACACTCGCAACTGTTACAGAACTGCNGAGCCCGTCAGNCCTTATCACAGATCATGCACTGCAATCACTCGCTGCTTTAGNGACACTACCT | |||||||||
gi|70776692|gb|DR688216.1|DR688216 EST1078300 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAC322 3' end, mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GAAACCCTTTGGCTGTAAACCCTCTTTCCCCTGTTCAATGTAATCACTGTACTTTGCTTTGTTTATCTATTTTTCACATTTCCTACTCCGAAACTATTGGAAACCATGATGAAATTGCGAAGGGATCTTCTGCCGAGGTCAAGCCTCGGCATCTCTTCTAACATAGGTGCTGCCTTCATTGCAACAAGGGCCGCGCTTCATAGCGCCTTCAATAGCACAGCCTCGGCTGTGGAGTCTGGCGATGGAAGATTTCTTGGAACGGCTTCGATCCCACGACCTCCTGCCCGAGTCATGCACAACACGCGGCCTTTTTCGGCCAATCCTATCATTTCGCCGATGACAGGTCCTCCACCCAACTTGGTCCCTCGATCCAAGCCAAGTGGAAGTTTAACATATGGAAAATTGACTGGTATTGCACGAAAAACCTTGAAGATGGACATAGTGCATTTCTTTGAAGGTTGCAATTTGAAACCAGAGGATATAAAGTTTGCATACAATAGGGTCTATGCTCCCCTTGGCGTGATTATTCAATTCTCCTCCAGGGCTGCATACACTACAGCACAAAGATATATAAGTATCAGAGGTCGTTATTATAGGTTGGTTGAGGTAGATCACCGTCAGTGGAGTAACCTCGAATCCCCTTTTGATGGAAAAGTTTTGTTGTTACATGGGGTTCCACAGAATGCCGTTCAAGAAGATGTGGAGCGATTTTTCTCTGGATGTAATATCGATAGTTCTAATATACGATTTCTTGTGAGGCAGGGATTGGACCAGCCAGTT | |||||||||
gi|7676295|gb|AW754575.1|AW754575 PC03H04 Pine TriplEx pollen cone library Pinus taeda cDNA clone PC03H04, mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGNNNATTNNNNNNNGGGGCACACATTCCGTGGGACCGGTGCTGATCCATTTGGAGCTCCAACAAAGAGCTGGCCATGGGAAGATGGCACAAACTCATTGGCTATGGCTCTACGCAGAATGAGAGCAAATTTTGAGTTTCTCAAGAAGTTAGGAGTTGAGAGGTGGTGCTTTCATGACCGGGATATTGCTCCTGATGGAAGAACACTTGCAGAATCAAATGCCAATCTAGATGCTGTTGTTGCTCTTGCCAAGCAGCTTCAGGAAGGAACTGAAATTCGTCCTCTGTGGGGAACTGCCCAGTTGTTTATGCATCCCCGCTACATGCATGGAGCTGCTACAAGTCCAGATATGCATGTCTATGCATATGCTGCAGCTCAAGTCAAGAAAGCTATGGAGATGACAAATGAACTAGGGGGAGAGAATTTTGTTTTCTGGGGTGGNNGAGAGGGCTATCAAACTTTGCTGAATACTGATCTGAAAAAGNNNCNNGACCATA | |||||||||
gi|74167193|gb|DT637122.1|DT637122 EST1152053 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMGZ95 3' end, mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGCCGGGGGAGCTGAAAAGTCCTAACTGTAACGAGCTTTAAGGGCAAGTCATGCTTTTATCGAGGATGGGTATGTGATAGAGCCTCATGGCCTCCCCTACAATTTGGCCTCTGTACAGTTATAGTGAGTGAAAGGGCGCACGATGCAAATTGTGATGCTCACCAGAGTGGACTTTCCTAGTTTCCCCAACTGTTACGGCACGTCTCTCATTCTGGTTAAATACCCATAAGTTAGTTGTTGGGATTCGATCCTTCATCACTCTTTCATTTTATTTTGCATCCTTAACGAGTTCGCCCACGTCCTTAATCTCCCATCTGATATCATTATATCACCTGTATTAGTCACTAGAGATCCAGAGTTTTACATTCCCTCGCGGGGAACTCGATCTTGTGATGTCAGCCAGATCTCCAATTTAAGAAAGCTGTGGCCGAATGGCAAAGAAATTTTGATTTTTGATTTTTTCTTTCTTTGGAGTTCTTAGTTAGTTCATCTTATCACAACTAAAGCAGCAGCTGCTGCTTTAGTTCTGACACCAAAGCATCTTACCTAGACTTGTTTGATTATCACCAGTTGTAAAGCGGGTCAGAATTAAAAAAACAATAATTAGCTCAAGCGGACTCGAAACCGTGACCATTCGTGTACTTTTCAGACTGAGAATTCATGCTAATGGATTCGTTGCAGTAATACATTCAGATTTATGTACTATTTGTTGCCCCTTCCTCTGGAATGTTTAAATCCTGGACACATTTAGCACG | |||||||||
gi|67556320|gb|DR096965.1|DR096965 STRR1_31_C07.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_31_C07_A033 5', mRN TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TCGACGCCTGTCACTACCTCTTCTCCATACGCCCTCCGCCGGACGAAGAGGACGCAGATAAAGACGGCACTGAGATACTGAATTACGGCGTAACATTTGCAGACGAAGAGGGTTTGGGTTTGCTGGACAGTTTCCTGCAGCAACACGCATGTCTGTCATTACCCGCGGAATCGACAGGCGGTGCGGCATCAAAATCCACAAGATCAGCGAAGGGCGGTTCGAAAGAAAACCCGGAGGCGGCGTACTGGACTGAATTGGCGCCGAGGGTGGAAGATTATAACACTGCGGTAGGCAAGGCCATTGCTGCTGGTTCGACGCAGATTATCAAGGGCTTATTCCTCTGCACCAATGCTTATTCTTCTCAGGTACAGAACGGCAGAGAATCTGTGAGAAGCCGAGTAACGAAAGCCGAGAGCAAAACGGGCACAAAGAGAAATATTCAAAGGGCGAAAAGGCTGTCAAGGATGACAGAAAAACTAAGCGAGAATGTGCTGGCTGGGATTGTCAGAATAAGCGGTGCCGTGACTGCTCCGGTTGTCGGCTCCAAGGCTGGCCAGAAGTTCTTTAGCACGTCACCTGGAGATGTCCTTCTCGCTTCCTTGGATGCTTTCAACAAAGTTGTGGACGCTGCAGAAATAGTTGGAAAGCATGCTTTGTCAGCTGCTTCCGAGGCAACAGTTGAAATTGTTGCAAACAGGTTTGGGGAGGAAGCAGG | |||||||||
gi|34492156|gb|CF474784.1|CF474784 RTWW2_7_B04.g1_A021 Well-watered loblolly pine roots WW2 Pinus taeda cDNA clone RTWW2_7_B04_A TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTAGTGTGCGATAGGGTCATTGTTGGATCTAAAATTGAGACGAGTTCTGATAATGGAGGATTTGGGGGTGGAGATGGAGCTGGGTTCTCTGGAGGGGGAGGGTATGGGGGCAGAGGAGGTGGGTTTGGATCAGATTCCAATAACATGGATGCATACTATAAGAAAATGCTGCAGACAGATCCTGGCAACCCACTTTTGTTGACGAATTACGCGAGGTTCCTGAAGGAGGTCAAGCATGATTTCAGAAAAGCTGAGGAATATTATGGGAGGGCCATGCTAGCCAGTCCAGGTGATGGAGATATCCTCTCTCTTTATGCCAATCTGATATGGGATGTTCACAGAGATGTACCTCGTGCCGAATCCTACTTTGATCAAGCTGTTGAAGCTGCTCCAGATGACTGTAATGTTCTCGGATCATATGCCCATTTCATGTGGAATGCTGAAGATGATGAAGAGGATCAGGATGCTCCTCAGCAGCAGAAAATGGGACTCCCAACATGTTTTGTTACTGCGACTACTGCAGCTACCTGATCACATCAGAGGCGTAATTGGAATTTGGTTTCAATGTACAGATCAAAAATCAGTAGTGCTGCGGCTG | |||||||||
gi|66979064|gb|DR055497.1|DR055497 RTCA1_24_C04.b1_A029 Roots minus calcium Pinus taeda cDNA clone RTCA1_24_C04_A029 3', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AGCGCCTTCATAGCAGAGCCTCGGCTGTGGAGTCTGGCGATGGAAGATTTCTTGGAACGGCTTCGATCCCACGACCTCCTGCCCGAGTCATGCACAACACGCGGCCTTTTTCGGCCAATCCTATCATTTCGCCGATGACAGGTCCTTCGCCCAACTTGGTCCCTCGATCCAAGCCAAGTGGAAGATTATTCAATTCTCCTCCAGGGCTGCATACACTACAGCACAAAGATATATAAGTATCAGAGGTCGTTATTATAGGTTGGTTGAGGTAGATCACCGTCAGTGGAGTAACCTCGAATCCCCATTTGATGGAAAAGTTTTGCTGTTACATGGGGTTCCACAGAATGCCGTTCAAGAAGATGTGGAGCGATTTTTCTCTGGATGTAATATCGATAGTTCTAATATACGATTTCTTGTGAGGCAGGGATTGGACCAGCCAGTTAAACTTGCTCTAGTAAATTTTCGGTCACAAAGGGAAGCAATGCATGCTCTACGCGAGAAAAATAGGACCATTTGTCTTAATAGTCCTATCACGTTGAGGCTGCTACAATGATGAAAATGATTTGGTGGTCGTAAATAACACGAGCTTTAGTGATGGTTATATTTGGAATGGATTACTATGTGCAGCCATGCAATGCGTTGGATCTGATTTTGATCTTTGCATTGACATATTCAGCAATGTCTTTTAAGAACATTCTGGGGACTTGTTGT | |||||||||
gi|11127085|gb|BF220953.1|BF220953 NXCI_155_H10_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_155_H10 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CAGAACAGGCTCACTACCTGGAATGGGCTGTTCATGGTTTCCGTATCACCAACTGTGGTGTAAAGGATACTACTCAGATCCATACCCACATGTGTTACTCCAACTTCAACGACATTATTCATTCCATTATTAATATGGATGCCGATGTCATTACCATTGAGAATTCCCGCTCCGATGAGAAATTATTGAGAGTTTTCCAGGAGGGCGTGAAATATGGGGCTGGAATCGGTCCTGGGGTTTATGATATACACTCTCCTCGCATTCCAGACACGGAAGAAATCGCAGACCGTATCCGCAAGATACTTGCTGTGCTGGAGACAAACATCCTGTGGGTGAATCCAGATTGTGGTTTGAAAACCAGGAAGTATGATGAAGTTGTTCCTGCATTGACAAACATNNNNGCATCTGCCNNNNTGCTGCGANNNGAGCTTGCCTCTGCAAAATGANNNAGAAAACAATTTAACATCAGCATTNNAGTGCAATAAAGATGTGGAGGAATAATTTTGGATTTCTTATGTGNNNNNGTCAG | |||||||||
gi|67047475|gb|DR069776.1|DR069776 RTDK1_9_H04.b1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_9_H04_A029 3', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTTGAGAGATATCTCGATGGAGGCCTGTGGAGAGGAGGTGCAAGTGAAGCTGTTAGGTGGCAGTACAAGTCCCTATGTGCTGCGGGTCCGCATAGCACTTGCTCTTAAAGGGATCCATTATGAGTATATCGAAGAGAATACTCAAAATAAGAGCGAGCTGCTGCTGAAATCGAACCCTGTCCACAAGAAGATACCTGTGCTAATCCACAATGGAAAGCCAGTTTGTGAGTCCACGATTATTGTGCAGTACATAGACGAGACGTGGGACACTAGGGCACCATTTCTTATGCCCAAAGATCCATATGACCGAGCCATTGCGCGCTTCTGGGCTGCCTTCATAGACGATAAGCTGTTTCCATGCATTCGGGCAGTTTTCAGGGGCCATGGAGAGCAGTGCCAGAAAGCGGTGGAAGAAACGGTGGCGAACTTTCTTATACTGGAGGAAGCTCTGCGAACGAACCTCTGTTTCTCGGGAAAAGCGTATTTCGGAGGAGATGGGATCGGTTTTCTTGACATCGAATTGGGTGGTCTGCTCGCATTTCTGAAAGCCCTGGAGAAAGGTACTGATTCAGTTTTGATAGACGCGGAGAAGATGCCGCTGTTAAGCGCATGGATGGATCGATTCTGTGAGGCCGATGGAGTGAAAGATGTAATGCCGGATCCGGTCAAGCTGCTGGAATTTATATGCGCCACGAGAGTTAAATTTGCGTCCCTACCTGCTGCCAATTAGGGGAAGTCATTCGGCCATTAAATTTAGATAGATTCTCAAGAGAAGGCTGTATTTAATTGGATATTATCCTCCACATTGTTTTTAATTTTATGTTGTCAGTTTGA | |||||||||
gi|74157972|gb|DT627904.1|DT627904 EST1156653 Subtracted pine embryo library, Lib_B Pinus taeda cDNA clone PIMCS04 5' end, mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): ACTTGAGACCCTGAAAATTGAAGACTTATACTCATCCTCAGCTTGACTTGTGCTGTTTACGCTTCTTGGATTGACTGCCCCTACTAGAAGTAGAATGGTCAGTGCTGCCAGAAGCCATTCGAGGCAGTGGACACCGATTATATGGCCAGCAAGCACTAGGGTGGTAAGATGAGATCGGGACTCCAACGGCGGGGAATCTTTTAGCACTGCAGGCTCCGACACACCATTACTACCCTTCTGGCTCTTGCAACGGGAAAGCTCATCTCTCAAAACTGTATTTTCAGTGCAGACAAAGGCAATTGATCCTTGAAGTTGATTACAATAATTCTCCCACATCTTGCACTTGGATTCAAGACCTTGAATGTAGGATTTCCTCCTTTGCCGTGATTGAAATGCAGCTTCTCTGTTATTGATAAGTCTTAATTGGCGCTTGGATTCGACGATTTTATGATCCTGGACCCCATGGGCCCGGGTCTCAGGAACCAAACCGTGAATCGAACTCTGCGACTCTTTGTTATCGACACTATAGCCATTCACAAGGGCGGTTCCCTCGGTAGTTCGGGGGCCGTGACAATTCACATCCACTGCATCGCTGTTGTTGTTTGGGGAAGCTGAGGAAGAAGAATTTACAAACAAATCCTCGAAATCGCCAAAATCTGAACAAAACCCTTTAGCATTTGCATGGACTGCCGAGGCGCCGAGATCACAAGCATCATCCTCTCCACATGGGATGAGGTCTTCCAAGATGAAACCCTCGTCAGTGAAATCCCGGTGCAGCC | |||||||||
gi|3365964|gb|AA556950.1|AA556950 792 Loblolly pine C Pinus taeda cDNA clone 7C8C, mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GCGCGGGTCCTTGTTAAACCATACCGTGAGAAAGGCAAGCTTGGAGATAGAAAGAATCCTGACAGAGGCGAGCAGTACGCAAAATATGCGCCTTTCAATCATTTTGATTCTAAGGACTACGATCATATGCATCTGGGTCCCAGAATCATGGATAATTCTGACGCTATAAGGAGACACATGGAGGAACAAGATCAAGTGATTGAACTCGAAAGAAAAAGGCTTGCTGAGTTACACTTCGCAGATGCACAAAGGGTGCATCTTGCGGCAGCTGANAGCCACATCTCCTTTGCATCAACACCTCTTGTTGTTTCTCACCCCCTCGAGAATAGATTCACTAATGGATTCCCACAGTCTGAAATAGAATCCAAGGCATCAGAAGATCTCAACAATTTTCCTTCAACCGATCATTTTGGGTACCTGCTTGAGGTACTGGAGAATAACGAAGATGAGCCTAAGCAGGACAATGACGATCAAGAAAGCTATGGACATAATCTTCCAGAAGATCCATTTTCAAATCTTAATGGATCCAATGGTATTAAAACGGTATTATATACTTCAGAAAAAAACAGTGGGGAACATGCCCACTATTTCCAAAGCTTTAGCACAAGCATCATCAACGTCTGTTATCGATAANAGCCGTTGTGGAACCGAAGCAATTAGCGTTTACCCCTTATTTTGTTTGAA | |||||||||
gi|67558541|gb|DR099186.1|DR099186 STRR1_53_E10.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_53_E10_A033 5', mRN TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AGGAGGTGCAAGTGAAGCTGTTAGGTGGCACTACAAGTCCCTATGTGCTGCGGGTCCGCATAGCACTTGCTCTTAAAGGGATCCATTATGAGTATATCGAAGAGAATACTCAAAATAAGAGCGAGCTGCTGCTGAAATCGAACCCTGTCCACAAGAAGATACCTGTGCTAATCCACAATGGAAAGCCAGTTTGTGAGTCCACGATTATTGTGCAGTACATAGACGAGACGTGGGACACTAGGGCACCATTTCTTATGCCCAAAGATCCATATGACCGAGCCATTGCGCGCTTCTGGGCTGCCTTCATAGACGATAAGCTGTTTCCATGCATTCAGGCAGTTTTCAAGGGCCATGGAGAGCAGTGCCAGAAAGCGGTGGAAGAAAC | |||||||||
gi|68029182|gb|DR168215.1|DR168215 RTPHOS1_24_A05.b1_A029 Roots minus phosphorous Pinus taeda cDNA clone RTPHOS1_24_A05_A029 3', TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CACGCCACCTCCAATCAGGCTTTATTTATGAATAATTTGATCAGAACCAACGGAAAAATACATGCAACTAAGTCGGCTCTTAATTAATGTATGAATATTGGTTAGAGATTCAGCTAGAGTTACCACCTTGCATTTTGAACATGGAAAAATATTACAAGGGGTGTTCAAATTACACCACATAATTTACATAGAAATGTCATGTAAATATACAAAAATTCAAGAATTCCCCCTACCGTCTTGGATCTCCCCTTGGTTTTCCTTCAAAGAATTCACTTAGCATCCTATCCAAATCTTCGGGAGTATATTTTATGTACTTCGGGGGATTTTTTCCGTTGTCTATCAAAGATCCAAAGCGTTTAACAAATTGACGATAAGCTGGTAAGAGAACCTCAGCCACTGCCAAACGTAGAGACTCACGCAGCTCATTGTCGGGAACAGTCCATTGAGTTTGCCGTTGGTGAAGCTCTTCAAATTGCATATTAAACGCTTTGAACCTTTCCTTCAATAAAGCTCTGGAAA | |||||||||
gi|68024519|gb|DR165909.1|DR165909 RTPHOS1_8_C09.b1_A029 Roots minus phosphorous Pinus taeda cDNA clone RTPHOS1_8_C09_A029 3', m TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TAAACTTTCATAAATATTTAAATGTCCAAATCATCATCAGGATCTTCATCTGAATCCAGAGCCTCGTCATCTGAATCTCGCACATAATGTATCTCCCCTCTTCCACTTTCCTTTGAAGCATTGAATGAATCAAAATTTGGATCTGTATTGACCGGATGTGAATCTGAAACAGGAGAAGCTCTCCAGGTAGATATTCCTTTCCGGCCATCATAGATTTGTAGTTCCTTCCCATTACCTTGGTGTTCAAATGGAAGTATAACCTTTGCCCGATCCTCCCGTTCTTTTTCTGTTAACTGGAGATTGAATTGAACCTGTGGCAAATTACTATTTCCACTAACAGTGAACTTCCCATGTGAAATTGCAGAAAACTTCACATCTGCCTGCTCTAGGGTGAACTCTTCAATATGTTCTCGAACTCTTCCATTCCGACGTTTCACTCGTAAACACAATTTCCCCTTTTTCAAATTTCCTTCTAATGCAGCGAGCTTGTCAGGGTTGCCCTTCAGTTTCAATGAAGCTGTGGATAATGGGGCAGTTGGTTCTAAAATGGCTATCATACTGGACAGATACTTGAGGGCTGTCACAATTCTTGGTTCATGCAAGTCAGAATGTACCAACAACATGAGAGATGAGATTTCATCGTGGCAACGCAGGTTACTTATGAGGTTTGCTACCAATGAAAATGATAGATGTCTCATCATGACACTAACCTGCACAGTACAGCACTAAGTCAAATTCAATGGGCAAGGGCAGGAAAACTAAACCAATCTTGTTCAACCATCAGGACAGAGGTATGAGTTTACCATGTTCAAGTTACAAGAACCAATATAATAAGCTAGA | |||||||||
gi|34508092|gb|CF479223.1|CF479223 RTWW3_24_C12.g1_A022 Well-watered loblolly pine roots WW3 Pinus taeda cDNA clone RTWW3_24_C12 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGAATGCCATGATTTCTGGCTATGTCCAAAATGGGCGGTTTGACAAAGCTTTGGAGCTCTTTAGACAAATGAGAGTCTCTGGTGTGAAGCCACACCCAGACACCTTTGCCAGTGTTCTTCCAACTTGTTCCAACTTGGCAGCTCTGGAACACGGTAGAGTGATACACGCAGACATAATTAAAGGTGGATTGCAGCCAAACACATTTGTGGGGAACGCTCTGATTGATTTGTATGCTAAATGTGGAACCATAGAGGATGCATACACGGTATTTGACAAAATGCCTAGACGGGATGTGGTCTCATGGACTGCAATGATCATGGGACATGCAATTCATGGCCGTGGGAAAGAGGCCTTACAGCTCTTTGAACAAATGCGTTTATGTGGAACAGTCCCAGACCATGTGATCTATGTTGGTGTCTTGTCTGCGTGTGCCCATGCTGGCCTAGTGGATGATGGCTGGCACTACTTTGATCAGATGAATAGACTTTATGATATAACACCTCTTAGAGAGCACTATTGCTGTATGGTAGATCTTCTTGGTCGAGCTGGTAACCTGTATATGGCAGAAGATTTGATCAACAAAATGCCTATGAAACCTGACTCTGCCGTGTGGGTGTCTCTGCTC | |||||||||
gi|48936586|gb|CO166045.1|CO166045 FLD1_58_H11.g1_A029 Root flooded Pinus taeda cDNA clone FLD1_58_H11_A029 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CAATTTCAGAGCAATCCCGATGGAGACCTGTGCAGAAGAGGTGCAAGTGAAGCTGCTAGGTGGCAGATCAAGTCCCTTTGTGCTGCGGGTCCGCATAGCACTTGCTCTTAAAGGGATCCGTTATGAGCACATCGAAGAGACTATGAATCCTAAGAGCGAGCTGCTGCTGAAATCGAACCCTGTCCACAAGACGATTCCTGTGCTCGTCCACAATGGAAAGCCAATTTGTGAGTCCATGATTATTGTGCAGTACATAGACGAGATGTGGGACACTAGGGCACCATTTCTTATGCCCAAAGATCCATATGACCGAGCCATTGCGCGCTTCTGGGCTGCCTTCATAGACGATAAGCTGGCACCAAGCATTCGGGCAGTTTTTAGGGGCCAAGGAGAGCAGTGCCAGAAAGCGGTGGAAGAAACAGTGGCGAACTTTCTTATACTGGAGGAAGCTCTGCGAACGAACCTCTGTTTCTCGGGAAAAGCGTATTTCGGAGGAGATGGGATCGGTTTTGTTGACATCGCATTGGGTGGTACATTAGCATTTGTCAATGCCCTGGAGAAGGCTACTGATTCAGTTTTGATAGAAGCGGAGAAGATGCCGCTGTTAAGTGCATGGATGGATCGATTCTGTGAGGCCGATGGAGTGAAAGAAGTTCTGCCGGATCCGGTCAACCTGCTGGAATTTATATGCGCCACAAGAGTCAAATTTGCATCCCTACCTGCTGCCAATTAGCGGAAGTCATTCGGCCATTAAATTACGATAGAAGAAGACTATATTTAATTGGATGTTATCCTCCACATTGTTTTTAATTTTATGTTGTCAGTTTGATTGATTGTATGTTTGTTGAAGTGTTTTTATGTTGTCAGTTTGATTGATTGTATGCTTGG | |||||||||
gi|48948376|gb|CO175504.1|CO175504 NDL1_55_E04.b1_A029 Needles control Pinus taeda cDNA clone NDL1_55_E04_A029 3', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTCAGTCCAACACTTCAGTCAGGCTTGGCCTTGGGATAGCCGAAGCTGCCCCAATTTCTAAGCGCAGCCCTATTGTTAACGGCTATCCAACCTACAAACCGGAGGCCAGGAAACAGCTGAGGCTGAAGGCAGCAGTGGGTGAAAATGGGAGGAAAAGGTTCACTATCCTGTGCAAGGCGGTTTCTTCTGTGGAACCTCAGATTGATGTGCAACCCCTCAATATTGCGGAAAATGTTACTCAGCTGATTGGAAAGACACCCATGGTGTATCTTAACAGTGTTGTGAAAGGATGCGTTGCAAACATTGCTGCAAAGCTCGAAATCATGGAGCCTTGCTGTAGTGTGAAGGACAGAATAGGCTACAGTATGATAACTGATGCCGAAGCCAAGGGTGCCATTAGCCCTGGCAAGAGCATTCTTGTAGAGCCAACTAGTGGGAATACAGGGATTGGTCTAGCATTTATTGCTGCAGCTAAGGGTTATAAACTTATCCTAACTATGCCGGCATCTATGAGTCTGGAACGGCGAGTACTGCTAAGAGCTTTTGGAGCAGAGCTTGTTCTCACAGAAGCTGCTAAGGGCATGAAGGGAGCTGTTCAGAAAGCTGAGGAAATTTTGAATAAAACACCTAATGCATACATGCTTCAACAGTTTGACAATCCTGCAAATCCCAAGGTCCATTATG | |||||||||
gi|48934972|gb|CO164431.1|CO164431 FLD1_48_A09.b1_A029 Root flooded Pinus taeda cDNA clone FLD1_48_A09_A029 3', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTCTTGGAGCATACTATTTTGGAGAGTAAGTTACAATGGACGGTACAAGAAAGCTGTGGTTTACCTATTTCTTCTGGTATGGAACCTTTGCCGCAGTTGGACCAACATCTGGGGGCATTCGAAGCAAATGCATTTCAACAGGGAGCTCATCTGTGTTCTGAGCAGTGTGTTTCTGCATCTGCGTATGCTGCTCCTCCTTGTTGTTCTGAACAGTTGAAATCTGTTGATGATAATTCCCATGCCCATTCAGCGAACTCAGCTGGACTTGCTGCAGATTTAGTAACTGCCATAACAGCTGATAATGCTTCCTTACTTGAGAAGCATAACCGGGGGGCATGGAATGGCGGGGTTGCCCAGGAATTGGAGCAAGTGCAATTGCTGGATGGACTCGAAGTGCAGTATTCTGAAGCATGTTCCAAGAGGTTCATTATTTTTGATCAGACTAGAAGCGGAGTTAGAGTCATTGCCCACCCTTCCGTTATGTACGAGTTTCCAAACCTGTTGACCGACTCTGCAAAAGGGTTGGACAAAATCAATGTCTATAATAGGATGCCCGAGAGAGAAAGCATTTCAGAAATTCCTTCGGTATTTAACTCAACTATCCGGGATGGGTTGCTGGCATACAGGGAGCATATGACTCCAGCATTCATAGCCATGCAAGGAATACGAAAGAGGAGGTCGTTGAGTGCAGAGGCTGCTGGTAACGGGTTTGTTGCTTGCTCTGGGCATGAAGAAACTGGAAGCCAAATAAGTTGTAATGGGTCAAGCAGAGGAGGTTATCAAAGTCAATCGCACGAAGACACCAGAGATCTTGAAGCTCTATTGGGTTCTGATGAGGAAGAGGATGATAGTACTGGTCACACTCCAAGTGAAGCCATAACAGACGACCA | |||||||||
gi|49008173|gb|CO196998.1|CO196998 GEO1_3_E09.b1_A029 Root gravitropism April 2003 test Pinus taeda cDNA clone GEO1_3_E09_A029 3 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GAAAAACAGCCATTAGATTGCATACAATTCAATTTCAGAGATATCTCGATGGAGGCCTGTGGAGAGGAGGTGCAAGTGAAGCTGTTAGGTGGCAGTACAAGTCCCTATGTGCTGCGGGTCCGCATAGCACTTGCTCTTAAAGGGATCCATTATGAGTGTATCGAAGAGAATACTCAAAATAAGAGCGAGCTGCTGCTGAAATCGAACCCTGTCCACAAGAAGATACCTGTGCTCATCCACAATGGAAAGCCAGTTTGTGAGTCCACGATTATTGTGCAGTACATAGACGAGACGTGGGACACTAGGGCACCATTTCTTATGCCCAAAGATCCATATGACCGAGCCATTGCGCGCTTCTGGGCTGCCTTCATAGACGATAAGCTGTTTCCATGCATTCGGGCAGTTTTCAGGGGGCCATGGAGAGCAGTGCCAGAAAGCGGTGGAAGAAACGGTGGCGAACTTTCTTATACTGGAGGAAGCTCTGCGAACGAACCTCTGTTTCTCGGGAAAAGCGTATTT | |||||||||
gi|67559000|gb|DR099645.1|DR099645 STRR1_57_C09.b1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_57_C09_A033 3', mRN TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTCTTGATTGGTCCTTTGTAAGAGATGATCAGCCCAGGTCAGAAACCAGCATGCAAATTGCACTAGCTATCAAAGAGGAGGTTGAAGATTTGGAGGCAGCTGGTATTCAGGTGATCCAAATCGATGAGGCAGCCCTGAGAGAAGGACTACCTTTGCGTAAGGCAGAACAGGCTCACTACCTGGAATGGGCTGTTCATGGTTTCCGTATCACCAACTGTGGTGTAAAGGATACTACTCAGATCCATACCCACATGTGTTACTCCAACTTCAACGACATTATTCATTCCATTATTAATATGGATGCCGATGTCATTACCATTGAGAATTCCCGCTCCGATGAGAAATTATTAAGAGTTTTCCAGGAGGGCGTGAAATATGGGGCTGGAATCGGTCCTGGGGTTTATGATATACACTCTCCTCGCATTCCAGACACGGAAGAAATCGCAGACCGTATCCGCAAGATACTTGCTGTGCTGGAGACAAACATCCTGTGGGTGAATCCAGATTGTGGTTTGAAAACCAGGAAGTATGATGAAGTTGTTCCTGCATTGACAAACATGGTTGCATCTGCCAAGTTGCTGCGAAGTGAGCTTGCCTCTGCAAAATAATCAAGAAAACAATTTAACATCAGCATTTTAGTGCAATAAAGATGTGGAGGAATAATTTTGGATTTCTTATGTGAAGGGGTCAGTTGATCTATTGTTTAGAAGTATATCAGTGGAAGTTCAACATAACTAGCAGGTTTCATTCTCAGTGAAAATCATATGGCTGT | |||||||||
gi|74168566|gb|DT638494.1|DT638494 EST1153425 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PIMHF83 3' end, mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGCCGGGGAGAGCAGCATTCTACAGGCAGCGGATGTGCAAGCAGCTGTCCCGGTTTCAAATCCTCAGACGGACAGACGTTCTCTAAGTAGAGTGTGGACAAACATACATTCAATCCGAGATCGATTTCTGGGGACCTTTGCAAAGATATTACAGAAAGCCAACTGTTTTCGACAGGGTATTCTATAATGAGGGCAGTAAGAGGGCATTCATCGTCAGTCATAGCAACTGTGTGTGTGGTATTTGCTGCGTGTCTTGCCCTGCTGCTGAGTGACGGGGTGAATGGGCAGCTAAGTTCCGACTGGGTGTCCGAGCTGGGCTCCTCAAGGGATGGATGGTTTGATCTCGGGATCGAATCCTCCTCTGCGACCGAAATGTGCGATGAAGAAAGCTGGGGAGAGTGTGGTGCTACTGTTGATGAGGAAAATGAAAATGTAGGCCATGGGAGGCTTTTGAGGCGAATCCGATACTACATCAGTTATGGGGCCTTAGCCGCGGATCGAATCCCGTGCCCTCCACGGTCTGGGAGATCGTATTACACTCGCAACTGTTACAGAACTGCAGAGCCCGTCAGACCTTATCACAGATCATGCACTGCAATCACTCGCTGCTTTAGAGACACTACCTAATAAACTAAACAAGGTCCTCAATCCTTGGCTCGGTCAGCTTCTTGTGTTGTATGCTTTGCACCAAAATATATGCATGCATTTTCTCTCTGATTTGCTATGTTATTTTTATCACAATGGGTGATATATCGTCTGTTTGCAACTGACAGGTCTGGAACTTTGCATTGTGATTTTCAATTGAAATGCTG | |||||||||
gi|68087452|gb|DR180789.1|DR180789 RTMNUT1_34_H02.g1_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_34_H02_A029 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTTCTCTTGAGAATGTCCCGACGTGAACGCTCCCCCTCTGCACCTTCATCCCCAAGGGAGGCCAAAAGACAAAAGCTGGAAGCTCCCCTGACGAGCGAAGACTACAAGAATGGGATCATGTTGGCCCCGATGGTCCGGTCTGGCGCTCTGCCCACGAGACTTTTCGCCTTGAAATATGGTGCATCGCTCGTGTGGGGCCCAGAGATCGTCGACAAGGCGATCCTTCACGCTGAACGGGTTGTCGATCCCGTGACCGGAGTCGTGAACTACAACGGAAAATCCAGAGCCATCTGGTCAACCCACCCCATAGAAAAACCGTACCTCATCTACCAAATTGGCTCTGCGGATCCAGAACTCGCGGTGAAAGCGGCAAAGACCGTCATGAACGACGTCTCGGGTATCGACCTGAACTGTGGCTGCCCAAAACCCTTCTCCACTTCCGGCGGTATGGGAGCTGCGTTGCTTACAACCCCGGATCTGCTGTGCTCAATCTTGACCGCACTGAGGAGTGCGATGCCGCCTGAGATTAGCGTGTCGGCGAAGATCAGGTTATTACCCACTCAGGAGGATACCTTGAAGCTTGTAGAGAGGATTATTGACACGGGCGTTTCGGCTCTAACCGTGCATTGTCGGACTAGGAATATGCGCAAGACAGAGAAGGCAACTATTGAAAGGTTGAGGGAAGTTGTGGAGTTTGTTGAAAAGATGGGGAAGGGTGTGGC | |||||||||
gi|74157169|gb|DT627101.1|DT627101 EST1160177 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone PIMAU88 5' end, TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGGTTTGCCTCAAGAATGGCCTTGGGTCATTTGTAGGGCGGTCGATTTTCATCTTCTCTCCATGCCCACTCGGTAGCGCATGAGCGGTAATGTTGGCCATGCTTGTCCCTGGAGGCATATGTGAACAATTCCCCGACTGCTCCAAGTTCTCGGAGTTGTATGGGTTGTTGTGGTGTGGCTCCTTGTGATGGTTGGCCTCTTCATTGTTCGGCTGTTTATGGCGCCGGTTTCTTGTGCTTGTACTCTTTCTGTGTTGGCATTGTCGGTTGAGATGCATACATTTAAGAGGGCCGTGGAAGGGTTTTGGTTGTAAACCACCTACCCTCCCTCTTGCTTGCTTTCCGTCGGGTGATGCGAGGCGCTGTTCTCCTTGTTGTAAATTCAAGGGTTGGCATTCCTTTCAAAGTGCACATCGTTTGTGGTTGCGCCGGCTTTGAGGTTTTGATAGATGTGTTGGCCCATATGTTTGATCGTGGGGTCGGCTTTTTCCTTGCATGTTGCGTGCATGGCAGGATTTTGCGGTTGGAAATGTTAAGTCACAACGTTTATGGGCATTTTGTTGTTTCAATTGTGTATGCGCTCGTGGTCCAACGGGGAGGAGGCTTGCTACATCGATGGTGTGGCCTATCTAGAAGAAGGATTTCGAGGTGGAACGCTTCGACCCCCCTCCTTTGCGTGGAGGTGGCCGTAGGGGAAAATTATTCATCGTTCGGTCGGTAAAGCTGTGGGAAATCTCCTAGGTTGCCTGTACGTAGGGTGCGTGGGGTGCGGAGCTGCCCGGTCCGTCCTCCTGTTTGGATATGTTCTTGTATTGT | |||||||||
gi|57885694|gb|CX650865.1|CX650865 COLD1_48_D03.g1_A029 Root cold Pinus taeda cDNA clone COLD1_48_D03_A029 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGCGAGATCGTTTCGGAAACAAATTCCCAACCTTCGGTGTTCGGGTTACCGCTAAAATATGTTTCGCTGGTGACTCTGGCAGTTCAAAATGCGGTTTTATCCATCGTTATGCACTACTCGAGGGTGTCTACGGTCCCCTCTGAAACGTACTCCGCCGGAACGGCTGTGCTGATAGTCGAGCTACTCAAGTGTTCAATTTCGTTCGTGATAGCGTATATGCGGATAGAAAACGCGACGGTTCCGTACAACCTACCTGCCAACGCGCCGACGACGAGGTCAAACCAACTTTTACGGTTAAAGAAGCTGTGGAGGGAGATATTCAGACTGGATTGTTGGAAGTTGTCGATTCCTGCCCTTCTCTACGTCATCCAGAACAACTTGCAGTATATAGCTGCGGAGAACCTCGACGCGGCAACGTTTCAAGTCACGTATCAAATCAAGATCCTCACGACCGCCGGATTCTCGGTTCTCCTTTTGCACAAGACGCTCAACCTGAGCAAGTGGATTTCGCTCGTTTTGTTGGCCACCGGCGTCGGGATCGTCCAGGTGCAGGGAGCGGGCAGCGGTGGGAAGGAGGTCACGGCTAACGTGATGAACCCCGCCGCCGGGTTTCTCGCCGTCTTGATTGGGTGCTGCACCTCCGGACTT | |||||||||
gi|67488839|gb|DR090494.1|DR090494 RTAL1_15_A05.g1_A029 Roots plus added aluminum Pinus taeda cDNA clone RTAL1_15_A05_A029 5', m TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GCGAGGTTCCTGAAGGAGGTCAAGCATGATTTCAGAAAAGCTGAGGAATATTATGGGAGGGCCATGCTAGCCAGTCCAGGTGATGGAGATATCCTCTCTCTTTATGCCAATCTGATATGGGATGTTCACAGAGATGTACCTCGTGCCGAATCCTACTTTGATCAAGCTGTTGAAGCTGCTCCAGATGACTGTAATGTTCTCGGATCATATGCCCATTTCATGTGGAATGCTGAAGATGATGAAGAGGATCAGGATGCTCCTCAGCAGCAGAAAATGGGACTCCCAACATGTTTTGTTACTGCGACTACTGCAGCTACCTGATCACATCAGAGGCGTAATTGGAATTTGGTTTCAATGTACAGATCAAAAATCAGTAGTGCTGCGGCTGAGATTTTGGTAGTTACAAAATCATCCCTCCATACATAACTGGTATGCCTAGTTGATCTTAGCAGGCATCATTAAAAGAAAATGGAAAGTTGGAGATTTGTGTATGGCTCTGTATTCTGACAAGCTACAGGGGATGTTTCCTAATGATCTCCTTGGTAGCAGTGGTATTCTACCGGAGACATGGTCTGCCTTTGGGGGTTATGTGAATGGAAATAAAAGTGACCCGGCTTTTTATTTAAATAGGGGAGCCGTTGAAG | |||||||||
gi|70784804|gb|DR694452.1|DR694452 EST1084544 Normalized pine embryo library, Lib_D Pinus taeda cDNA clone PWAEC64 3' end, mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGACAATGGCAGCGGCCATCATACAGCCGGCCTTGGGCTTCGGCTGCAGGTATCGCTTCTTCAATTCCAGAGTAGAACACAATGGTCTCAGGAGTAAACAGAGGTTTTTGGCAAGATGTGGGATAGATTATACGTCTTCTGTAAGAGCTGCGGTCGCATCACAGTTATTTGGAGGGACCAGGGAGCTACGTATAGTGGCAGCTATTGATCCGGAAGTTTCCAGAAGGAGTTTACATCTGGGCAAGGACAAGCAGCACGGTTTGGATTCTCATTTTTGGACTTGGATGTTTCTGTCTGGATTTTCTTCCTCCTCAAGCTTTGCAGAAGTTGCATTTGCTAGTGAAGCTGTGACACCAAATGCAGTTTATGAAGTTGGTGAATTATTTGAATTTGGAATACAGTTAATTTACCTTGGAGCATTAATTAGCTTGCTTGGGGTTGGGAGTTTTTTTGTTGTTCGCCAAGTCGTTATTCGCAGAGAGCTTGAAAATGCTGCCAAAGAATTGCAGGAACGAGTTCGTAGTGGTGAAGCCAATGCAGTGGAATACTTTGAATTGGGTGCAGTGATGTTGAGGAAAAAGTTTTACCCTCTTGCTGCTAAATACCTTGAACAGGCTATCGCGAAATGGGAGGGTGATGTTCAAGATCTGGCACAGGTTCATAATGCACTTGGCTTCAGTTATGCAAGTGATGGAAAATTAGATAAGGGTATCACGCACTATGAGAAAGCTGTGGAACTTCAACCGGGATATGTAACAGCTTGGAATAATATGGGTGATGCCTTTGAGAAGAAGAAGGATCTGAAAGCTGCACTCAAAGCATATAATCAAGCACTTATTTTT | |||||||||
gi|67553911|gb|DR094556.1|DR094556 STRR1_15_G04.b1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_15_G04_A033 3', mRN TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CAGCTGGACTGGTCAGACCTCCTCTATCTTACCATCATGCCTGCAGAGAAGAGAAAAATGAAGTTCTGGCCTGCAAAGCCTGTAGAGTTCAGGGAAACTGTGGAGGAGTATGCCATCGCGGTTCAAAGGCTTAGCGATCAAATGCTGTATCTAATGGCGGAGAATCTCGGTTTAAAATCCCCTGACTTGTTCGTCAGTATGTTCCGAGAAATCTCACAGTCAATGCATTACTACCCTCCCTGCCCACGACCAGATCTTGTTATAGGGTTGAGTTCTCACACTGATGGAGGAGGTATAACCATTTTACTGCAAGAAGATGGGGTTGTTGGGCTGCAAGTTCGTAAAGATGGTGACTGGATCCCAGTCCAGCCCATCCCCGGCGGTCTAGTTATCAATCTCGGCGACATGGTAGAGGTAATGAGCAATGGAAGATACAAGAGCATAGAGCACCGCGCTGTGGCTAACAAGGAGAAAGATCGAATTTCAATTGCAGCGTTTTGCAATCCAGAGAAGGAAGCAGAAATTGGTCCTGCTCCCGAACTTATAAATGAGTCCAATCCCCACAACTACAGAACCTTCCAGAGAAGCAAATATCTTGAAAATTATTTCCTTGAAGGGAAGAAAGCCATTGATTTTGCAAAAATCAACCCTTCAGTGGCTGCTTGACTATCAATGTGGTTCATGCTCTAAAATGCCATAAGGTTCTTCGTTCCCACTACTTTTACAATGTTATTTACAATAATATTTCCTTGAAGGGAAGAAAGCCATTGATTTTGCAAACCTCAACCCTTCATT | |||||||||
gi|9833059|gb|BE582063.1|BE582063 NXCI_023_G08_F NXCI (Nsf Xylem Compression wood Inclined) Pinus taeda cDNA clone NXCI_023_G08 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AATCGGTCCTGGGGTTTATGATATACACTCTCCTCGCATTCCAGACACGGAAGAAATCGCAGACCGTATCCGCAAGATACTTGCTGTGCTGGAGACAAACATCCTGTGGGTAAATCCAGATTGTGGTTTGAAAACCAGGAAGTATGATGAAGTTGTTCCTGCATTGACAAACATGGNTGCATCTGCCAAGTTGCTGCGAAGTGAGCTTNNCTCTGCAAAATGATCAAGAAAACAATTTAACATCAGCATTTTAGTGCAATAAAGATGTGGAGGAATAATTTTGGATTNNNTATGTGAAGGGGTCAGTTGATCTATCNNNTAGAAGTATATCAGTGGAAGTTCAACATAACTAGCAGNNNTCATTCTCAGTGCAAATCATATGGCTGTACCTGAGAATCACCTAAGTGCACATCACGAAGATTGAGCCCACTCTGNCCAAAAATGTAGAGTTTCTGCAATTTTTTTAGAGCGAACAAGNAAAAAGTAAACCAAAAAATCAACTAGTTTTTAAGAAATTTGCAGAGTTGTTTATTGACCACGCTGGTCATTTTTCTAAATATTTCAGTAGA | |||||||||
gi|20384118|gb|BQ198156.1|BQ198156 NXLV126_C11_F NXLV (Nsf Xylem Late wood Vertical) Pinus taeda cDNA clone NXLV126_C11 5', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGCCATTATGGCCGGGATCATTTGTATATTTTCATGCACTTCCATCTGTGGACTCCGTTCCACGTGGTTTTACAAATGGAAATTGGAATTGCCATTGTTAGAATGGCTTCACTTCTGAATACCTACATGTGCATTCTTTATGATTTTTCAATCTATAATTGATTGGGGAAGCTGTGGAGATACACATATATTTCCTGCAGGTTTACTGAAGAGTGTTCGAGGATGAAATTTTATTTTCCTCGCTATTAAAGATTTATTTAGCTTTATTGGTTGTATTACTGTCACTTCGAGAAACTTTGTATTTGTTATGTACCCGCATACTCTATGCAAATATAAAGAATTGTGAAACTGGCATCAGTATTTTCATCCG | |||||||||
gi|67561023|gb|DR101668.1|DR101668 STRR1_75_A06.b1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_75_A06_A033 3', mRN TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTCTTCTGATGCTTAAGGAGACACATGGAGGAACAAGATCAAGTGATTGAACTCGAAAGAAAAAGGCTTGCTGAGTTACACTTCGCAGATGCACAAAGGGTGCATCTTGCGGCAGCTGAGAGCCACATCTCCTTTGCATCAACACCTCTTGTTGTTTCTCACCCCCTCGAGAATAGATTCACTAATGGATTCCCACAGTCTGAAATAGAATCCAAGGCATCAGAAGATCTCAACAATTTTCCTTCAACCGATCATTTTGGGTACCTGCTTGAGGTACTGGAGAATAACGAAGATGAGCCTAAGCAGGACAATGACGATCAAGAAAGCTATGGACATAATCTTCCAGAGAGTCCATTTTCAAATCTTAATGGATCCAATGGTATTAAAACGGTATTATATACTTCAGAGAAAACAGTGGGGAACATGCCCACTATTTCCAAAGCTTTAGCACAAGCATCATCAACGTCTGTTATCGATAAGATGCCGTTGTGGAGCCGAAGCAATTAGCGTGTAGCCACTTATTTTGTTTGAAATGTGTGCCAAAGGTAATTAAATTGTCTGAGGAGTGCCCTATCTGTGTGCAACACAAGGGCAACCAGGTCTTTAAACTTTCTGGAAGGAGAGATTTACAATTTGATTATTACTTGGGAAAGAGAGCCAGTCCCACACCAAATGTGTGGTAGTTATACAAAATATACATCATGATACTCAGCTTGGTCCATTTCTCAGATGGCACCGGGTCTAAAATATAAA | |||||||||
gi|66738655|gb|DR016285.1|DR016285 STRS1_9_E07.b1_A034 Shoot tip pitch canker susceptible Pinus taeda cDNA clone STRS1_9_E07_A03 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TTCTTTTTCGTGATAATTAGCCTGCATAACAGTTTTAAAGAATGAGAAGTACGTTGTGCAGAACAGCACATGTTACTGCATAGGTTTCTCATGACATAAAATTTCAAAACCTAAATTTTTGTACAGAGTACAGTTGAGAATGGTTAGACACCAATGAATAGAATTGCGCTGACCATGGTGTCGAATCTTTAGTAATGATTAAAGAGAAACTAGTCCGTTAAATGGTTCGCTAGCTGTTGTATGCCATGGAATTGTCTGTTATGGTTGAAGTTTCCTGCGGTGAGGGCAACTGTTGTTGGTCTATCTTCTGCCGCCTTATTTCAACTACTCTTCTGTGGCAATTTGAATGAACCTCACACCGCAAGCGTTGCAGAGCGTCTTTGGGCCCAACGGGCCTGCTCTCCACTGCGGGGTTTTTTGGACTAAACAGTGGCTGCACCTCCGGCTCTCCTGCCCCCCGCCGCCGCCACCGCCCCCGCCTCCGCCTTTCTTGTGGAACAACTTTTTCCTCTTTTTGACCGCGGCCGGCGGCGCTGCGTAGACCGAGCCCTTCACCGCCGGCTTGCGTCCGGTTCGGGGTTCGTAGCTCTTAATAGCAACGCTCACGAAAGCTGTGGGATTAGCGTTGCGTGACCTCTTACTCCGAGCACGCCCCAGCACCCACGTCCGTCCCGCGCCGGCGAGCAAAGCGTTGCTCTGCTTTCGTTGGCTCTCCTCGCGCTCGGCCGGCGAGCAAACCGTTGCCACGGACTCCACCGGGGCAACGAACTCTGGCACCGTAGCGAGCGATTCGTCCGCAACGAAGCTCGACAACCATTCCAGTTCCTCCAAGGCGTCGTCTGGCACGCAGAGCTCGCCCGGAAACGGGCACGCA | |||||||||
gi|66692246|gb|DR014740.1|DR014740 HEAT1_51_G10.b1_A029 Root at 37 C for 24 hr Pinus taeda cDNA clone HEAT1_51_G10_A029 3', mRNA TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AACAGAAGGCGGGAAAAAGCTAAATAAATAAAAAAGCCCAAAGCTTAATAGAAACATGTATGATATTTATCTGATATTGGCAGTTATGAAAGAACGCTTTTTTTTCCTGCCGGAACATTAAAATATATCAGCAGCGCAGACTGTAGAACCAACCTATGACACTGACTTCGTTTAGCGAATACATAGCTAAGCTGAGCACTACTGCATTCATAAATGCAAGATGACAACACTTCAAAGAACGTGGTCACTTAACCGCCTAAGCCTGGATGGATGACGATAGTACTAACTACCTACAAATCTAATGAAAAACCCTAATAATAGACTAGACAAAAATCGACAGATCAGAATCTCAGAAAACTTCTCGAAACCCTAATAATCATAGCAAGATCGTCCATTACGCGGCATACAGCAAAATCTAGCCAAGAGAAGGAGTCCTGCCCGGGCTTAAACAGGGCAAGATTATAGCAGGGTCATCGTGATGTTTCAGTCAGGGTTAGAAAAATAGACAATTTCTCAAGCTTAAGGAAATCCGTTAAAGAAAATCAAGAAAACTCACTAAACGCTTACCTTGATATAAAATTAAAGCAAATCTGCACCCGGTATCAAAGATCCAAGTCTCCCGCAAACCCCAGGCGCGGCCATGATAAGTATTGCAGAATCCTACCATGCTTTCCCACAGTTTTCTTGAACTTTAATCGCAGACGTAGAAATCAGAATCTCCTCGTCCCGTACACGTAAAGTTCAAGAAAGCTGTGGAAAAGTATGACAAGATTCGTCATGAGATCGAAACCCATCAGAGAAATAACTCCCACGCGCGATCTTGTG | |||||||||
gi|30360485|gb|CD021835.1|CD021835 NXNV_165_C05_F Nsf Xylem Normal wood Vertical Pinus taeda cDNA clone NXNV_165_C05 5', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): TGAGGACCTGGCATGCATTTCTAACAATTTGTTCGGGGAAGCTGTAGAGATTGCAAAGAAAGTGGATGAAGTGGTTGTAGTCGTTGGCTTAGNCCAAACCCAAGAAAA | |||||||||
gi|51901279|gb|CV138960.1|CV138960 EST850169 Sequencing ESTs from loblolly pine embryos Pinus taeda cDNA clone RPIB935 5' end, m TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CGGGTTTGCCTCAAGAATGGCCTTGGGTCATTTGTAGGGCGGTCGATTTTCATCTTCTCTCCATTCCCACTCGGTAGCGCATGAGCGGTAATGTTGGCCATGCTTGTCCCTGGAGGCATATGTGAACAATTCCCCGACTGCTCCAAGTTCTCGGAGTTGTATGGGTTTTTGTGGTGTGGCTCCTTGTGATGGTTGGCCTCTTCATTGTTCGGCTGTTTATGGCGCCGGTTTCTTGTGCTTGTACTCTTTCTGTGTTGGCATTGTCGGTTGAGATGCATACATTTAAGAGGGCCGTGGAAGGGTTTTGGTTGTAAACCACCTACCCTCCCTCTTGCTTGCTTTTTCCGTCGGGTGATGCGAGGCGCTGTTCTCCTTGTTGTAAATTCAAGGGTTGGCATTCCTTTCAAAGTGCACATCGTTTGTGGTTGCGCTGGCTTTGAGGTTTTGATAGATGTGTTGGCCCATATGTTTGATCGTGGGGTCGGCTTTTTCCTTGCATCTTGCGTGCATGGCAGGATTTTGCGGTTGGAAATGTTAAGTCACAACGTTTATGGGCATTTTGTTGTTTCAATTGTGTATGCGCTCGTGGTCCAACGGGGAGGAGGCTTGCTACATCGATGGTGTGGCCTATCTAGAAGAAGGATTTCGAGGTGGAACGCTTCGACCCCCCTCCTTTGCGTGGAGGTGGCCGTAGGGGAAAATTATTCATCGTCCGGTCGGTAAAGCTGTGGGAAATCTCCTATGTTGCCTGTACGTAGGGTGCGTGGGGTGCGGAGCTGCCCGGTCCGTCCTCCTGTTTGGATATGTTATTGTATTGTGTAGCGAGCCTCTTGATTTGCATTTTATTTCCTTCCTTTGCCTTCGCATCGTGGTTGCCGCAGCGGTCAAGTGATCGAGGTCCACCGTT | |||||||||
gi|68088166|gb|DR181490.1|DR181490 RTMNUT1_39_F05.b2_A029 Roots minus micronutrients Pinus taeda cDNA clone RTMNUT1_39_F05_A029 TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): ATGGAGTCATCCATCATCCGGATGATATCATTGGCGCTTTCTCACTTATCATATATACGCTCACGTTGTTGCCACTCTGCAAATATGTTCTCACTGTACTTTGGGCCAATGACAATGGAGACGGTGGTACATTTGCACTGTATTCCGTGATATGCCGCCATGCCAAGGTGAGTCTTATCCCAAATCATCAGGCAGAGGACAGGGAGCTTTCAACATATAAGCTTGCCGCACCCAGCAAGCAATTGAAAAGAGCTTCGAAGATAAAGGAAGCTTTGGAAAACAGCAATGTGGCCAAGATTATTTTGTTGTTGCTAACGCTTATGGGAACCTCCATGGTTATGGGAGACGCTATCTTGACTCCTTCCATCTCAGACGTGGTAGTTGGGATATCTGTGGCCATCTTAGTTACTCTCTTTTCAGTCCAGAGGTTCGGAACCGATAAAGTCGGCAGCGTATTCGCCCCTGCGATTCTGATTTGGTTCTTGTTTATTTTGTTCATTGGCTTATACAATCTTGCCATGCATGATACCAGCGTCTTACGCGCTTTTTATCCAAAATATATCATTGACTATTTTAGCAGAAACCACAAACGGGCTTGGAATTCTCTTGGTGGTATCGTTCTTTGCATTACAGGAAATGAAGCTATGTTTGCAGACCTGGGACACTTTTCGGTTCGCTCCATTCAGATTTCCTTTACTGTACTTG | |||||||||
gi|67553667|gb|DR094312.1|DR094312 STRR1_13_F09.g1_A033 Stem Response Resistant Pinus taeda cDNA clone STRR1_13_F09_A033 5', mRN TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AATAGGCTACAGTATGATAACTGATGCCGAAGCCAAGGGTGCCATTAGCCCTGGCAAGAGCATTCTTGTAGAGCCAACTAGTGGGAATACAGGGATTGGTCTAGCATTTATTGCGGCAGCTAAGGGTTATAAACTTATCCTAACTATGCCGGCATCTATGAGTCTGGAACGGCGAGTACTGCTAAGAGCTTTTGGAGCAGAGCTTGTTCTCACAGAAGCTGCTAAGGGCATGAAGAGCTGTTCAGAAAGCTGAGGAAATTTTGAATAAAACACCTAATGCATACATGCTTCAACAGTTTGACAATCCTGCAAATCCCAAGGTCCATTATGAGACCACTGGACCTGAAATTTGGGAAGACACAAAGGGGAAGGTTGACATTTTGGTTGCTGGGATAGGAACTGGAGGGACAGTTACTGGTGTTGGTCGATATTTAAAAGGCAAAAATCCAAATATCAAGATTATTGGTGTGGAGCCAACTGAGAGCAACATACTGTCTGGGGGAAAACCAGGTCCCCACAAAATTCAAGGCATTGGTGCAGGATTTATTCCACGTAATTTGGATGTAGACATACTTGATGAGGTCATACAGGTATCTAGTGATGAAGCTGTTGAGATGGCAAAGCAATTGGCACTTCAGGAAGGCTTGATGGTTGGAATTTCATCGGGAGCTGCAGCAGCAGCAGCAATTGAAGTGGCAAAACGATCAGGGAACTCAGGGAAACTGATTGCAGTTGTATTTCCAAGTTTTGGTGAGCGATATCTGTCAACTGTTTTGTTCCAGTCCATA | |||||||||
gi|67046388|gb|DR068714.1|DR068714 RTDK1_2_A08.g1_A029 Roots, dark Pinus taeda cDNA clone RTDK1_2_A08_A029 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): CTATACAGAAGTTATTGCTCCACTTGATGTTGCAACTTATGGAGGACTTTGTGCACTTGCGTCTTTTGATAGATCAGAACTTAAGAATAAAGTTATAGACAATATCAATTTTCGAAATTTCTTGGAACTAGTGCCTGAAGTAAGGGAACTTATTCATGACTTCTATGCAAGCCGATATGCTTCATGCATAGAGTATCTGCAGGATCTCAAGGCAAACCTACTGCTTGATATACATCTTCATGATCACGTGGAAACACTGTACGATCAGATTCGGCACAAAGCCCTTATCCAGTATACAACTCCTTTCATATCCGTTGATCTTCATACGATGGCAAATGCATTCATGACAAATGTGGCTGGGCTTGAAAAGGAGCTTGAAGCTTTGATTATGGATAATCAAATTCAGGCACGCATTGATTCACACAACAAGATCTTATACGCTCGCCATGCTGATCAACGTAATACGACATTTCAGCGGGTTCTCCAGACTGGGGTGGAATTTGATAGGGATGCACGAGCAATGATGTTGCGGGCCAATATCATGAGGCATGATTTTATCTCGAGATCATCCAGGAGGATGTGACTTGGCATGATTATTTTTTGCAAATTAGTATTCTGTTGCATTTGATGATCTATACAAGCTTTGGGAATTCTGTAAATGTTGCAGGAATTGTTCTGATTTTTTAGTCTAAGAAATCTGTGGAAAACATGCTTGATTGTGATCAATACGTTGGCAATTAATGTTTTTTTTTCTCCATTGCA | |||||||||
gi|49448969|gb|CO367652.1|CO367652 RTK1_35_E02.g1_A029 Roots minus potassium Pinus taeda cDNA clone RTK1_35_E02_A029 5', mRNA se TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): GGAGACCTGTGCAGAAGAGGTGCAAGTGAAGCTGCTAGGTGGCAGACCAAGTCCCTTTGTGCTGCGGGTCCGCATAGCACTTGCTCTTAAAGGGATCCATTATGAGCACATCGAAGAGACTATGAATCCTAAGAGCGAGCTGCTGCTGAAATCGAACCCTGTCCACAAGACGATTCCTGTGCTCCTCCACAATGGAAAGCCAATTTGTGAGTCCATGATTATTGTGCAGTACATAGACGAGATGTGGGACACTAGGGCACCATTTCTTATGCCCAAAGATCCATATGACCGAGCCATTGCGCGCTTCTGGGCTGCCTTCATAGACGATAAGCTGGTACCATGCATTCGGGCAGTTTTTAGGGGCCAAGGAGAGCAGTGCCAGAAAGCGGTGGAAGAAACGGTGGCGAACTTTCTTATACTGGAGGAAGCTCTGCGAACGAACCTCTGTTTCTCGGGAAAAGGGTATTTCGGAGGAGATGGGATCGGTTTTGTTGACATCGCATTGGGTGGTATATTAGCATTTGTCAATCCCCTGGAGAAGGCTACTGATTCAGTTTTGATAGACGCGGAGAAGATGCCGCTGTTAAGTGCATGGATGGATCGATTCTGTGAGGCCGATGGAGTGAAAGAAGTTCTGCCGGATCCGGTCAAGCTGCTGGAATTTATATGCGCCACAAGAGTCAAATTTGCATCCCTACCTGCTGCCAATTAGCGGAAGTCATTC | |||||||||
gi|48932259|gb|CO161718.1|CO161718 FLD1_30_E09.g1_A029 Root flooded Pinus taeda cDNA clone FLD1_30_E09_A029 5', mRNA sequence TTCCACAGCTTTCTTGAAC EST sequence (targeted fragment marked with yellow): AGCGCTGAAGACCCGCATGAAGAATCTCCGGAAAAAGTCATGGCAGCCATTGGAATCGATGGAGGTGAGCGACGAAATGCCTCTGGAAGAAGGATATATAAAGGCGCTGGAGTGGCTTTGGTGTGCGATAGGGTCATTGGTGGATCTAACATTGAGACGAGTTCTGATAATGGAGGATTTGGGGGTGGAGATGGAGCTGGGTTCTCTGGAGGGGGAGGGTATGGGGGCAGAGGAGGTGGGTTTGGATCAGATTCCNNTAACATGGATGCATACTATAAGAAAATGCTGCAGGCAGATCCTTGCGACCCACTTTTGTTGACGAATTACGCGAGGTTCCTAAAGGAGGTCAAGCTTGATTTCAGAAAAGCTGAGGAATATTATGGGAGGGCCATGCTATCCAGACCAGGTGATGGAGATATACTCTCTCTTTATGCCAATCTGATATGGGATGTTCACAAAGATGTACCTCGTGCCTAATCCTACTTTGATCAAGCTGTGGAAGCTGCTC | |||||||||