| mature miRNA: TTCCACAGCTTTCTTGAACT species: Bruguiera gymnorhiza database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|53814871|gb|BP940370.1|BP940370 BP940370 Bg01 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg01-07_I11 5', mRN TTCCACAGCTTTCTTGAACT EST sequence (targeted fragment marked with yellow): CGGTTCAATAAAGCTGTGGGAAGATACAGACAGGGTCAAGGAAAGTTCTGTTGCGTCAACAACCATCGAATTGGATATCATCTGTTGGTTCTTCTTGATTGGTATTCTGTTCAAAATTGCTTGCTTTATTATTTGATTAATATCTTTGATTCACTGATTTTTGATTGTCTAATTGTAAGTTCTATTTCCTATTTACTCATTAGTTGCATGATTTATGTGGCCATCGCAGCTTCTGGCTTAAAATGGCTTCCTGCAGGTATTTCTATTTTAGTCTGACACGATGGATGGATCATAGATGCAAGTTCTTATCTTCTTTCAAATTTTTATTCATTATATCATTGATGACTTGACTGTGTTCAATTTTTGTCATCTTTTGGGGTCTAACAGATCACAGCTGTTACTTCGAGCTGCC | |||||||||
gi|53815039|gb|BP940538.1|BP940538 BP940538 Bg01 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg01-08_B05 5', mRN TTCCACAGCTTTCTTGAACT EST sequence (targeted fragment marked with yellow): GTCATGCTATTCCACAGCTTTCTTGAACTTTCTTGAACTGCTTTTTATAATTTTTGTATATAGCACCATACATGGAAGCTCAAGAAAGCTGTGGGAAAACATGGCAATTCAGGATTTCTTCAGTTAATTGACCTTTTCTCCTTTTTCAAATCTCTTTAGTTTTCTACTTGCTTGCTCTTGTGGACAAGATCGATCCTTCTCCTGCTTCATC | |||||||||
gi|124543288|gb|DB993053.1|DB993053 DB993053 Bg04 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg04-11_F23 5', mR TTCCACAGCTTTCTTGAACT EST sequence (targeted fragment marked with yellow): GCTTAGTTATCCACAACTTAAGCCCGATCATTTCCCATGTATTTAGATTTAGGCCCACTAACTCTAACCGCTCACCATTTCGGGGGGGGTGGGGGGGGGGATAATCTCGTGGCCTACTCTAAGCAGGCTGTACTCTGAATTTTTCAGGTTTTTTCGACTAGGCCACCCAATATATTGCATTATACATGGGGGTCTAAAAATTGCTGCCAACTAATGTAGCCAATGTCCTTTACTGGCAGCGGATGAACCCGGGTTCCGAACGTTGACGGACGGCTTCCTGGTAGCCTGGAGGTGGGCCCGATGCTTCTAAAATTGCAAATGAACTCTCTAGGATGGGCGGGGGGGGCGTTATCGCATCTATTAGAAATATTTTTGCACCGTGAAAAGTTGCGCAATGAAAAGTGCCCCAATTATCGCTGTTTTCCTTAAACAAAGGGAAGGCTACTAAGGCCGGTCTTTTTTTCGCAGAAAAACTCGCCCTTTTTAAGCCGCGGGCTCGAGCCGGGTTTAAAAAACCAAAAACTTTAGAGTCCGGCGCGGGGCTCACCTTGTTTGAGAAATAAAACGCGACTCGAAAAAACGCCTGTTTTTTTAAGGGTACAAGATTTTTGTGAAAAGGTGGTTTAAAAAAGCTGTGGTAAAGACTTTTAGCAAAGGGGGCTGCAATAAAAGCGCGGAAGGGCCTAAAAAAGTGGGGCGGACCACCGTGTTGGGAATTTCGCCCTTTGTAAAAAAATATTGGTAGGTTACCAGCAAATTTGTTTTTATAGGGTTAAAAACAAGCCGGGGCGCTTTAATACGGGGATGGTATAAAATTGCCGCCAGCTTTTCCGCCGGAAAAGA | |||||||||
gi|53825750|gb|BP951249.1|BP951249 BP951249 Bg05 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg05-17_G06 5', mRN TTCCACAGCTTTCTTGAACT EST sequence (targeted fragment marked with yellow): GATACCTACTACACAACCTACGCTATACAAACCCTCTGCTCCTCCTTTTATCTCTCTCTCTCTCTCTCTCTCTCTCTGTCTTTGGGCTTAGCTTGCCCGTCAATTCTCTGTGATTTCTTGTCTCTAGGGTTTTATGGGAAGGAGGATTTGGATCTTCAGAGAAAAATCAAATCTTTGTTGATTTTTCTATTATGGGTTTTTGACAAATGAGTGAATGGCCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATCTCTTAGATTTGTTTTTGCATGCCACGGTTTCTGGCTGGACGACTTGTGGATTTGCGGTTCAATAAAGCTGTGGGAAGATACAGACAGGGTCAGGGAAGTTCTGATCTGCATCCGGTTCCCTATCTATTGGTTATTTGATAGCTATTCTGTTCAGTTAGTTGCTTTATTGCTTAATTAATGTATTGGATCCGTTTGATTTCTGATTTACTAATCGTTCTATAGTCATCAGCGTTCAACCCACCA | |||||||||
gi|124544079|gb|DB994993.1|DB994993 DB994993 Bg05 Burma mangrove cDNA library Bruguiera gymnorhiza cDNA clone Bg05-12_K23 5', mR TTCCACAGCTTTCTTGAACT EST sequence (targeted fragment marked with yellow): GAGACACAGAGGAGGAGGAGGAGGAGGCATAAATAAACCGAAGCAGAGAGGAGGAGCAGAAGAGAGAGCAAAGCCGACAGCCCCCACCGAGCCTACGCTACAGACACTTGCCATTCCAGTCGAGAAACACAGAAACAGAGGCAAAACCACAAAGAAACACGGGCGATGCTGCTTTTAGAGCGGCTAGCGAGAGCGCCTCGCCGAGATGACGCCCGTTCCCATCATCATATCCTAAAACCCTAAACTCTGGGCTCGCAACTTGTCGTCCAGTCACTCGCCTCCAGACTCTATTACACCTGTTTCCTCTCAGTTGATGAGAAATTCAGCAGCTGCTCTTGGCCCCCGCCTCTAACTCTGGCCGCCCTGCTTGTTATTCGCAAGCTTTATAAGTTGCTGCCGTGTTGATTGCAGTTCTCACGATTCCAGTATCCTATGCCACTGCCCAATTGTCGTAAGTTTCCCTGAAACCCTCCTTTGCCTTCTCCCAATCCTTCTTCAAGGTGATGGGACCCTGGAAAGGTTTCCCCAAAAAAAAACCGTAGCGGATTTGAGATTCGCTACAAAACCCAAAGGATTAGGATTTGGTTTTTATTCGGCGTTTTAGCGGTTGTGGCCCAGAAGCCTAAAGGGTCACTGTTAAAAATTCCAAGTGCCCCCTTGCCTGTTGAGGGTCCCACAATTTTATTCTAAAACTTTTGGGTTCAAAAACCTGTGGAATCAAGGGTTTTAGGACCTAAATGGGTGATTCTCCACATTTTTTCTATCGGATGTTTGGGGAA | |||||||||