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mature miRNA: TTCCACAGCTTTCTTGAACTG
species: Glycyrrhiza uralensis
database: miRNEST
The numbers on the right side of the alignments show a score calculated for them.
When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5.

Predicted miRNA targets
gi|227784134|gb|FS240289.1|FS240289 FS240289 RPSC Glycyrrhiza uralensis cDNA clone KAN048-L19.F 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTG
|||||||.|||||||   |||
AAGGTGTTGAAAGAAGGGGAC

EST sequence (targeted fragment marked with yellow):
GACTGGAATTGTGTTCGTGTCCTTCACCTATTGATTCAACAGGGGAAGAAAGTTGTGGAAGAAAGGACAAAGGGAACTAACTGTGCCATTTTCGAACCTTAATAAAACCCACTCATAATAGAGTCGTGTGTTCTGAAACCAAATCATCCATCATCACGCTTTTTGGGTTCTTCATTTTCAACTTCAGCACCGTACTCACTCACTTGATACAATACAAGCTTCTGTGGATCATATTGTTGTTTTACCAATATATATTGGAAGTTCTGGGAATTTTCTGGTACTGCTAGAGGATGGGATCAAGTGTCTGGCATTGTGAGAATAGATCCAGCTTTACAAATGAGTCCCCTCAATCAGGAGATCTTGAAAATGCTCCTGAAACTGGGTCCCTCTCCATTGTTGTGCTTGGTGCTTCTGGTGATCTTGCTAAGAAGAAGACATTTCCAGCACTTTTCCACCTCTACCGCCAGGGATTCCTACCACCAGATGAAATTTGTATTTTTGGCTATGCAAGAACAAAAATCACT


gi|227806073|gb|FS254335.1|FS254335 FS254335 RPSC Glycyrrhiza uralensis cDNA clone KAN090-M13.F 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTG
|.|||||||||| ||||||||
AGGGTGTCGAAATAACTTGAC

EST sequence (targeted fragment marked with yellow):
GGTATCTTCAGTCTTCAATATCATATGGCCCTCTTTGTATTCTTCCACAGCTTTCTTGAACTGCATTCAAAGAGTTCCTTTGCATGCATGCCATGGCACTCTTGCTCCCACCACACCTTGTTTTGCAGTTCAATAAAGCTGTGGGAAGATACAGATAGGGTCAACCATAACGGATTCAATTCTTCACTAAATTAATGTATCTATTACTTAATTTTGCTATATCCAGTTATTTTGTGTGTCTATGTATTTTTTTAATTTGTGTGTGTCTATATTTGGGATAAACTTATTGCGATGTAATTTTTCTTTCTTTTTTATACTGCTATTTGACATAATTTAAATCATTGATTTTTTTTTTGAGATATATCTGATCAGAATTCTCAGATGCAGTAAACAGAATGGTATCAA


gi|227801546|gb|FS247748.1|FS247748 FS247748 RPSC Glycyrrhiza uralensis cDNA clone KAN071-D14.F 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTG
|| ||||||||. |..|||||
AAAGTGTCGAAGTAGTTTGAC

EST sequence (targeted fragment marked with yellow):
GCAATTGCAAGCAATCTGAAATTTCTTATTTGACTTGTTCACATACATCCACCCTCCTTGTGATCTCCAAGCAAGACCAAGATATATAAACAAGTCTTACTTATAGCTTCATATATACCCTTCACATTACATTAGTGGGTTTGATTCGTGTGGTGTGAGTGACATATCAATAATATGGGGAACTACATTTCTTGCACTCTAGCAGGAGGAAAGCACTCAAGATCAAGAGGCATAAAGGTGATATTCCCAAGTGGGAAGATCCAGCAGTTTGATGAAGCTGTGAAAGCAGCGGAGCTCATGCTTGAGATGCCAAGTTTCTTTGTTGTGAACACTCTGTCTCTTCATA


gi|227797685|gb|FS265991.1|FS265991 FS265991 RPSC Glycyrrhiza uralensis cDNA clone S02198-Re15-G12 5', mRNA sequence 

TTCCACAGCTTTCTTGAACTG
|.||||||||||||||| ||
AGGGTGTCGAAAGAACTCGAA

EST sequence (targeted fragment marked with yellow):
GAGAGTGGTCCACGAGAACTTTGAATGGGCATCGTTATTTCTCATTTCTCACTTCTCATCCACCCCCCTTTTTACTCTCTTCTGCTATATCTCCACCCTTCATTCAGCCCCCTTTTCCCTCATTATAACTTGAGTGCTTCAAAACTTCGCTTGGGGGTGTGAGATCTGAGGCCAATTTTGCTCAAGTCCTGGTCATGCTTTTCCACAGCTTTCTTGAACTTCTTATTATGCATCTTAAAAGCTCTCTACAGGATCAATTAAAAGCCCTAGGCTAGCTACTAGAAGCTCAAGAAAGCTGTGGGAGAATATGGCAACTCAGGCTTCAATTAATTTTGCAGATGCAGAGTACTACAAGGTGAAATCCAACTACTTCCTTTATCTTCTGAGCATAATTGTCATGGTAACTCTCTTTCTCTGGAAGAATTCTCTGCATTATGTGGTAATTCTCGAGAATTTATAGCCTTGCTATATCTCAAATTCACTTTAATTTACCCGAATTTATAGCCTTG