| mature miRNA: TTCCACAGCTTTCTTGAACTT species: Saccharum hybrid cultivar CoS 767 database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|268781156|gb|CN610810.1|CN610810 SUS02-006F-C01-002.b Sugarcane mature stem library Saccharum hybrid cultivar CoS 767 cDNA cl TTCCACAGCTTTCTTGAACTT EST sequence (targeted fragment marked with yellow): CAAAATGAATGGCAGCATATGGAGGTTGAAGAAGAGAAAGCAATAATGTGCAGTGTGTATCTGTAGCCTCTCAACTCTTCAAGTCCATGCCATGCCTTTCCACAGCTTTCTTGAACTTCTTCTCCTCCCCCTTATCTCTCTCTCTCTCTCTCTCTCTCTCCCTCTCTCATCTCCGAAGAAGGTCAAGAAAGCTGTGGGAAGAAATGACATAACAAGGACTCTGCAATTCTGTAGTGAGATGTGATGTTAATTGGCTCTATGTAATATGTATGCAGATGTAAGTTACTCCCTCTGAATCCATCGTGTTCTATGTGGAAAAAAAAAAAAAAAAAAAAAAAAAA | |||||||||
gi|166791493|gb|DV730852.1|DV730852 SUS01-125-A03-A-019.b Sugarcane mature stem library Saccharum hybrid cultivar CoS 767 cDNA c TTCCACAGCTTTCTTGAACTT EST sequence (targeted fragment marked with yellow): CAATTGGGCTGCACAAATTGAACTTAGTTCTCCTGGAAGCAGAGTACACATAGAGTTAGAGAAGATTGGTAAAAAGAATAGGTTCAAGAGAGTATTTGTTGCTTTGAAGCCATGCATTGATGGCTTCTTAGCTGGTTGTAGGCCTTTCATTGGAGTAGATGCATCTTGTCTCAATGGTAAATATACTGGACAATTGGCTTCAGCTACTGGGGTGGATGGGCACAACTGGTTGTACCATATTGCATATGCTGTTTTTGACTCTGAGACTGAAGATAACTGGAAGTGGTTTCTGGAAAATTTACACACAGTCATAGGAGACCCTCCAGGTCTAGTGTTGTGCTCAGATGCTTGTAAAGGGTTAGAGAAAGCTGTGGGGGCTGTGTTCCCACGAGCAGAGAACAGAGAGT | |||||||||