| mature miRNA: TTCTCCATGTGCATACCAACAC species: Populus trichocarpa database: miRNEST The numbers on the right side of the alignments show a score calculated for them. When calculating the score, a mismatch is given a score of 1, bulge: 2, and wobble: 0.5. |
| Predicted miRNA targets | |||||||||
gi|73866940|gb|DT469678.1|DT469678 WS01918.C21_I21 PT-DX-N-A-10 Populus trichocarpa cDNA clone WS01918_I21 3', mRNA sequence TTCTCCATGTGCATACCAACAC EST sequence (targeted fragment marked with yellow): ATTAGGTGTCCATGCAGGAAGTGCAAAAATATAAAATATCTGCATCCAGATGTTGTAATGATGCATCTTCTACACAAGGGGTTCATGGAGAATTACCTGTGTTGTATGCACACGGAGAACTATTTGATCCTAAAAAAACCATGATAGAAAGGATGAGTGAGTCAACTTCTAGTGCTAGCAATATGCATGTAGTTGTAGATGACAATAATAATCCTAATAAGAATATAATTATGGATGCGATGAGAATGAATCAAGGTCATGCGAAGCAGATGGTAAGATTTATTTTAATTACATTCATTTTTTTTAATTTGTTGTTATTTATAAGTATATTTGACTAACAATATTTTTATCTTGCAGGTTACGACTCTTGGACAGGAGCCAGGTCCAATGGAGCTTTTTGTGGAAACGCATGTGCGGAGTGATGACCGTCAAAAAGGAGTGCAGCGGCTCATCGACAACCGAGCTCAACACTTTGTGGGGACATATAACAACAGGTTGAATGAGAGATACGAGAACGATCTTTCGACCCAGTCAGATTCGGATTTGTGGTTGAAGACAGGATTGTCTGGTGGACCCCATAGAAATTGAGTATACGAACTCTCTAATACCACGACCAAGAACTTGCGGGTGACCCGTGGTGTTTCAACCGTTGGGTGCTCACAATCGATCCCGAGCATTTAGTCTATGAAGTTCATAGCCTTGTTAGATCAATGAGTGAAAGAATGTCTGGTCCATCTCAATAAAAAACATGAACAACTCTATGTGAATTTTAAAGAACTTCGCCAAATAGTTATGGACATGAGATTACATATGAAAAAAAAAAAAAAAAAA | |||||||||